RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 ADKP55263 362 aaKnown RBP27.06■■□□□ 1.92
TTC3-225ENST00000540756 ADAM9Q13443 819 aa27.06■■□□□ 1.92
TTC3-225ENST00000540756 XKR3Q5GH77 459 aa27.06■■□□□ 1.92
TTC3-225ENST00000540756 KCNV1Q6PIU1 500 aa27.06■■□□□ 1.92
TTC3-225ENST00000540756 SEPT1Q8WYJ6 367 aa27.06■■□□□ 1.92
TTC3-225ENST00000540756 MAML3Q96JK9 1138 aa27.06■■□□□ 1.92
TTC3-225ENST00000540756 NOC4LQ9BVI4 516 aaKnown RBP27.06■■□□□ 1.92
TTC3-225ENST00000540756 KATNBL1Q9H079 304 aa27.06■■□□□ 1.92
TTC3-225ENST00000540756 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.06■■□□□ 1.92
TTC3-225ENST00000540756 CLIC2O15247 247 aa27.06■■□□□ 1.92
TTC3-225ENST00000540756 EIF3DO15371 548 aaKnown RBP eCLIP27.06■■□□□ 1.921e-6■□□□□ 9.4
TTC3-225ENST00000540756 DKC1O60832 514 aaKnown RBP eCLIP27.06■■□□□ 1.92
TTC3-225ENST00000540756 DHX37Q8IY37 1157 aaKnown RBP27.06■■□□□ 1.92
TTC3-225ENST00000540756 SPATA33Q96N06 139 aa27.06■■□□□ 1.92
TTC3-225ENST00000540756 STRA6Q9BX79 667 aa27.06■■□□□ 1.92
TTC3-225ENST00000540756 XPNPEP1Q9NQW7 623 aa27.06■■□□□ 1.92
TTC3-225ENST00000540756 PDLIM7Q9NR12 457 aa27.06■■□□□ 1.92
TTC3-225ENST00000540756 LOC102724159A0A0B4J2E5 919 aa27.05■■□□□ 1.92
TTC3-225ENST00000540756 K7ENM7 598 aa27.05■■□□□ 1.92
TTC3-225ENST00000540756 PPP1R37O75864 691 aa27.05■■□□□ 1.92
TTC3-225ENST00000540756 OATP04181 439 aa27.05■■□□□ 1.92
TTC3-225ENST00000540756 NR2F2P24468 414 aa27.05■■□□□ 1.92
TTC3-225ENST00000540756 STAT5BP51692 787 aa27.05■■□□□ 1.92
TTC3-225ENST00000540756 PEX3P56589 373 aa27.05■■□□□ 1.92
TTC3-225ENST00000540756 PWP2Q15269 919 aaKnown RBP27.05■■□□□ 1.92
TTC3-225ENST00000540756 C17orf99Q6UX52 265 aa27.05■■□□□ 1.92
TTC3-225ENST00000540756 MAMDC4Q6UXC1 1216 aa27.05■■□□□ 1.92
TTC3-225ENST00000540756 CPLX3Q8WVH0 158 aa27.05■■□□□ 1.92
TTC3-225ENST00000540756 BSNDQ8WZ55 320 aa27.05■■□□□ 1.92
TTC3-225ENST00000540756 LARSQ9P2J5 1176 aaKnown RBP27.05■■□□□ 1.92
TTC3-225ENST00000540756 PDXKO00764 312 aa27.04■■□□□ 1.92
TTC3-225ENST00000540756 SFPQP23246 707 aaKnown RBP eCLIP27.04■■□□□ 1.925e-8■■■□□ 17.3
TTC3-225ENST00000540756 RBL2Q08999 1139 aa27.04■■□□□ 1.92
TTC3-225ENST00000540756 TTLL4Q14679 1199 aa27.04■■□□□ 1.92
TTC3-225ENST00000540756 ZC3H3Q8IXZ2 948 aaKnown RBP27.04■■□□□ 1.92
TTC3-225ENST00000540756 SCFD2Q8WU76 684 aa27.04■■□□□ 1.92
TTC3-225ENST00000540756 KIFC3Q9BVG8 833 aa27.04■■□□□ 1.92
TTC3-225ENST00000540756 TYW1Q9NV66 732 aaKnown RBP27.04■■□□□ 1.92
TTC3-225ENST00000540756 TLR2O60603 784 aa27.04■■□□□ 1.92
TTC3-225ENST00000540756 SKILP12757 684 aa27.04■■□□□ 1.92
TTC3-225ENST00000540756 ADCYAP1R1P41586 468 aa27.04■■□□□ 1.92
TTC3-225ENST00000540756 EDRF1Q3B7T1 1238 aa27.04■■□□□ 1.92
TTC3-225ENST00000540756 KIAA1524Q8TCG1 905 aa27.04■■□□□ 1.92
TTC3-225ENST00000540756 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.03■■□□□ 1.92
TTC3-225ENST00000540756 TMEM88BA6NKF7 163 aa27.03■■□□□ 1.92
TTC3-225ENST00000540756 RNF225M0QZC1 329 aaPredicted RBP27.03■■□□□ 1.92
TTC3-225ENST00000540756 NOP56O00567 594 aaKnown RBP27.03■■□□□ 1.92
TTC3-225ENST00000540756 SLC16A4O15374 487 aa27.03■■□□□ 1.92
TTC3-225ENST00000540756 FGFR1OPO95684 399 aaKnown RBP27.03■■□□□ 1.92
TTC3-225ENST00000540756 MARK3P27448 753 aa27.03■■□□□ 1.92
TTC3-225ENST00000540756 KLK7P49862 253 aa27.03■■□□□ 1.92
TTC3-225ENST00000540756 CRHR2Q13324 411 aa27.03■■□□□ 1.92
TTC3-225ENST00000540756 CYP4F22Q6NT55 531 aa27.03■■□□□ 1.92
TTC3-225ENST00000540756 PAXIP1Q6ZW49 1069 aaPredicted RBP27.03■■□□□ 1.92
TTC3-225ENST00000540756 ZNF467Q7Z7K2 595 aaPredicted RBP27.03■■□□□ 1.92
TTC3-225ENST00000540756 TC2NQ8N9U0 490 aa27.03■■□□□ 1.92
TTC3-225ENST00000540756 CCDC150Q8NCX0 1101 aa27.03■■□□□ 1.92
TTC3-225ENST00000540756 DRC1Q96MC2 740 aa27.03■■□□□ 1.92
TTC3-225ENST00000540756 ZCCHC17Q9NP64 241 aaKnown RBP27.03■■□□□ 1.92
TTC3-225ENST00000540756 DIS3Q9Y2L1 958 aaKnown RBP27.03■■□□□ 1.92
TTC3-225ENST00000540756 PPP4R3CPQ6ZMV5 832 aa27.02■■□□□ 1.92
TTC3-225ENST00000540756 CCDC102AQ96A19 550 aa27.02■■□□□ 1.92
TTC3-225ENST00000540756 CEP63Q96MT8 703 aa27.02■■□□□ 1.92
TTC3-225ENST00000540756 SLC15A5A6NIM6 579 aa27.02■■□□□ 1.92
TTC3-225ENST00000540756 NR3C1P04150 777 aa27.02■■□□□ 1.92
TTC3-225ENST00000540756 GYPCP04921 128 aa27.02■■□□□ 1.92
TTC3-225ENST00000540756 MORN1Q5T089 497 aa27.02■■□□□ 1.92
TTC3-225ENST00000540756 AFAP1L1Q8TED9 768 aa27.02■■□□□ 1.92
TTC3-225ENST00000540756 CEP89Q96ST8 783 aa27.02■■□□□ 1.92
TTC3-225ENST00000540756 TIPINQ9BVW5 301 aa27.02■■□□□ 1.92
TTC3-225ENST00000540756 PCDHB13Q9Y5F0 798 aa27.02■■□□□ 1.92
TTC3-225ENST00000540756 TISP43B9A030 160 aa27.01■■□□□ 1.91
TTC3-225ENST00000540756 CALUO43852 315 aaPredicted RBP27.01■■□□□ 1.91
TTC3-225ENST00000540756 DGAT1O75907 488 aa27.01■■□□□ 1.91
TTC3-225ENST00000540756 CASP4P49662 377 aa27.01■■□□□ 1.91
TTC3-225ENST00000540756 INHBEP58166 350 aa27.01■■□□□ 1.91
TTC3-225ENST00000540756 ARHGAP1Q07960 439 aa27.01■■□□□ 1.91
TTC3-225ENST00000540756 CCDC40Q4G0X9 1142 aa27.01■■□□□ 1.91
TTC3-225ENST00000540756 VWA3BQ502W6 1294 aa27.01■■□□□ 1.91
TTC3-225ENST00000540756 GLG1Q92896 1179 aa27.01■■□□□ 1.91
TTC3-225ENST00000540756 TINF2Q9BSI4 451 aa27.01■■□□□ 1.91
TTC3-225ENST00000540756 VTA1Q9NP79 307 aa27.01■■□□□ 1.91
TTC3-225ENST00000540756 FXR1P51114 621 aaKnown RBP eCLIP27■■□□□ 1.91
TTC3-225ENST00000540756 TBC1D8BQ0IIM8 1120 aa27■■□□□ 1.91
TTC3-225ENST00000540756 HAUS6Q7Z4H7 955 aa27■■□□□ 1.91
TTC3-225ENST00000540756 CCDC155Q8N6L0 562 aa27■■□□□ 1.91
TTC3-225ENST00000540756 CETN3O15182 167 aa27■■□□□ 1.91
TTC3-225ENST00000540756 AKAP3O75969 853 aa27■■□□□ 1.91
TTC3-225ENST00000540756 CASP14P31944 242 aa27■■□□□ 1.91
TTC3-225ENST00000540756 NPTX2P47972 431 aa27■■□□□ 1.91
TTC3-225ENST00000540756 DNM2P50570 870 aa27■■□□□ 1.91
TTC3-225ENST00000540756 MAN2A1Q16706 1144 aa27■■□□□ 1.91
TTC3-225ENST00000540756 FAM160B1Q5W0V3 765 aa27■■□□□ 1.91
TTC3-225ENST00000540756 TMEM143Q96AN5 459 aa27■■□□□ 1.91
TTC3-225ENST00000540756 NIFKQ9BYG3 293 aaKnown RBP27■■□□□ 1.91
TTC3-225ENST00000540756 NDST4Q9H3R1 872 aa27■■□□□ 1.91
TTC3-225ENST00000540756 ATP6V0A4Q9HBG4 840 aa27■■□□□ 1.91
TTC3-225ENST00000540756 FLRT1Q9NZU1 646 aa27■■□□□ 1.91
TTC3-225ENST00000540756 ITIH6Q6UXX5 1313 aa27■■□□□ 1.91
TTC3-225ENST00000540756 CCDC169A6NNP5 214 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms