RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 MYO1FO00160 1098 aa13.39□□□□□ -0.27
NPC1-202ENST00000540608 DAPK3O43293 454 aa13.39□□□□□ -0.27
NPC1-202ENST00000540608 ITGA4P13612 1032 aa13.39□□□□□ -0.27
NPC1-202ENST00000540608 SHROOM1Q2M3G4 852 aaPredicted RBP13.39□□□□□ -0.27
NPC1-202ENST00000540608 TCERG1LQ5VWI1 586 aa13.39□□□□□ -0.27
NPC1-202ENST00000540608 C6orf89Q6UWU4 347 aa13.39□□□□□ -0.27
NPC1-202ENST00000540608 DAAM2Q86T65 1068 aa13.39□□□□□ -0.27
NPC1-202ENST00000540608 ZFPM1Q8IX07 1006 aa13.39□□□□□ -0.27
NPC1-202ENST00000540608 ZC3H12CQ9C0D7 883 aaKnown RBP13.39□□□□□ -0.27
NPC1-202ENST00000540608 TTC7AQ9ULT0 858 aaPredicted RBP13.39□□□□□ -0.27
NPC1-202ENST00000540608 ASTN1O14525 1302 aa13.39□□□□□ -0.27
NPC1-202ENST00000540608 FLT3P36888 993 aa13.38□□□□□ -0.27
NPC1-202ENST00000540608 CASP4P49662 377 aa13.38□□□□□ -0.27
NPC1-202ENST00000540608 SLC30A5Q8TAD4 765 aa13.38□□□□□ -0.27
NPC1-202ENST00000540608 U2AF1L4Q8WU68 220 aaKnown RBP13.38□□□□□ -0.27
NPC1-202ENST00000540608 UBLCP1Q8WVY7 318 aaPredicted RBP13.38□□□□□ -0.27
NPC1-202ENST00000540608 CCDC17Q96LX7 622 aa13.38□□□□□ -0.27
NPC1-202ENST00000540608 FAM20AQ96MK3 541 aa13.38□□□□□ -0.27
NPC1-202ENST00000540608 PPANQ9NQ55 473 aaKnown RBP13.38□□□□□ -0.27
NPC1-202ENST00000540608 GCNT4Q9P109 453 aa13.38□□□□□ -0.27
NPC1-202ENST00000540608 QSER1Q2KHR3 1735 aa13.38□□□□□ -0.27
NPC1-202ENST00000540608 HLA-DOAP06340 250 aa13.38□□□□□ -0.27
NPC1-202ENST00000540608 STAT1P42224 750 aa13.38□□□□□ -0.27
NPC1-202ENST00000540608 GALCP54803 685 aa13.38□□□□□ -0.27
NPC1-202ENST00000540608 APOBEC3HQ6NTF7 200 aaKnown RBP13.38□□□□□ -0.27
NPC1-202ENST00000540608 DCAF4Q8WV16 495 aa13.38□□□□□ -0.27
NPC1-202ENST00000540608 MKL1Q969V6 931 aa13.38□□□□□ -0.27
NPC1-202ENST00000540608 LENG9Q96B70 501 aa13.38□□□□□ -0.27
NPC1-202ENST00000540608 BORCS6Q96GS4 357 aa13.38□□□□□ -0.27
NPC1-202ENST00000540608 P2RX7Q99572 595 aaKnown RBP13.38□□□□□ -0.27
NPC1-202ENST00000540608 YY1AP1Q9H869 796 aa13.38□□□□□ -0.27
NPC1-202ENST00000540608 FAM114A2Q9NRY5 505 aa13.38□□□□□ -0.27
NPC1-202ENST00000540608 AMFRQ9UKV5 643 aa13.38□□□□□ -0.27
NPC1-202ENST00000540608 GREB1LQ9C091 1923 aaPredicted RBP13.38□□□□□ -0.27
NPC1-202ENST00000540608 FAM196BA6NMK8 535 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 H0YHG0 523 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 TTI1O43156 1089 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 TRAPPC3O43617 180 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 RAD21O60216 631 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 POU5F1Q01860 360 aaKnown RBP13.37□□□□□ -0.27
NPC1-202ENST00000540608 GJB7Q6PEY0 223 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 TMC3Q7Z5M5 1100 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 CYFIP2Q96F07 1278 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 DNAJC18Q9H819 358 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 DIS3Q9Y2L1 958 aaKnown RBP13.37□□□□□ -0.27
NPC1-202ENST00000540608 UTP11Q9Y3A2 253 aaKnown RBP13.37□□□□□ -0.27
NPC1-202ENST00000540608 RSPH10B2B2RC85 870 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 GCNT3O95395 438 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 RSPH10BP0C881 870 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 PPP2R2AP63151 447 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 ACTN3Q08043 901 aaPredicted RBP13.37□□□□□ -0.27
NPC1-202ENST00000540608 IFT88Q13099 833 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 DRP2Q13474 957 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 RNF187Q5TA31 235 aaPredicted RBP13.37□□□□□ -0.27
NPC1-202ENST00000540608 BCCIPQ9P287 314 aaKnown RBP eCLIP13.37□□□□□ -0.27
NPC1-202ENST00000540608 PCDHB13Q9Y5F0 798 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 PCDHAC2Q9Y5I4 1007 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 CLIC2O15247 247 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 LMNB1P20700 586 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 CACNB3P54284 484 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 ODF2Q5BJF6 829 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 SLFN13Q68D06 897 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 LNX1Q8TBB1 728 aaPredicted RBP13.37□□□□□ -0.27
NPC1-202ENST00000540608 CABS1Q96KC9 395 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 POLR3CQ9BUI4 534 aaPredicted RBP13.37□□□□□ -0.27
NPC1-202ENST00000540608 RUSC1Q9BVN2 902 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 BHMT2Q9H2M3 363 aa13.37□□□□□ -0.27
NPC1-202ENST00000540608 ANKRD31Q8N7Z5 1873 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 FAM86B1E9PN63 330 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 TGFB1I1O43294 461 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 EVI5O60447 810 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 TBCAO75347 108 aaKnown RBP13.36□□□□□ -0.27
NPC1-202ENST00000540608 EYA4O95677 639 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 PAEPP09466 180 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 FAM86B2P0C5J1 330 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 SOX5P35711 763 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 PLCB4Q15147 1175 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 SPDYCQ5MJ68 293 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 PLCD3Q8N3E9 789 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 KCTD17Q8N5Z5 321 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 OLIG1Q8TAK6 271 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 STK33Q9BYT3 514 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 VCPKMTQ9H867 229 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 KCNQ5Q9NR82 932 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 OLFML3Q9NRN5 406 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 DDX20Q9UHI6 824 aaKnown RBP13.36□□□□□ -0.27
NPC1-202ENST00000540608 NOVA2Q9UNW9 492 aaKnown RBP13.36□□□□□ -0.27
NPC1-202ENST00000540608 NCANO14594 1321 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 BUB1BO60566 1050 aaPredicted RBP13.36□□□□□ -0.27
NPC1-202ENST00000540608 FOSP01100 380 aaPredicted RBP13.36□□□□□ -0.27
NPC1-202ENST00000540608 TMEM253P0C7T8 217 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 EEF2P13639 858 aaKnown RBP13.36□□□□□ -0.27
NPC1-202ENST00000540608 GAP43P17677 238 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 PSMC2P35998 433 aaKnown RBP13.36□□□□□ -0.27
NPC1-202ENST00000540608 SREBF1P36956 1147 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 MNAT1P51948 309 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 DHX9Q08211 1270 aaKnown RBP13.36□□□□□ -0.27
NPC1-202ENST00000540608 KCNA1Q09470 495 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 NFIL3Q16649 462 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 BRWD3Q6RI45 1802 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms