RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 HYAL1Q12794 435 aa12.9□□□□□ -0.34
TMEM258-205ENST00000540434 CUL4AQ13619 759 aa12.9□□□□□ -0.34
TMEM258-205ENST00000540434 CTC1Q2NKJ3 1217 aa12.9□□□□□ -0.34
TMEM258-205ENST00000540434 TRIM71Q2Q1W2 868 aaKnown RBP12.9□□□□□ -0.34
TMEM258-205ENST00000540434 B3GNT9Q6UX72 402 aa12.9□□□□□ -0.34
TMEM258-205ENST00000540434 CCDC60Q8IWA6 550 aaPredicted RBP12.9□□□□□ -0.34
TMEM258-205ENST00000540434 GIMAP8Q8ND71 665 aaPredicted RBP12.9□□□□□ -0.34
TMEM258-205ENST00000540434 HAS1Q92839 578 aa12.9□□□□□ -0.34
TMEM258-205ENST00000540434 ASIC4Q96FT7 647 aa12.9□□□□□ -0.34
TMEM258-205ENST00000540434 C8orf76Q96K31 380 aa12.9□□□□□ -0.34
TMEM258-205ENST00000540434 CNTNAP3BQ96NU0 1288 aa12.9□□□□□ -0.34
TMEM258-205ENST00000540434 CNTNAP3Q9BZ76 1288 aa12.9□□□□□ -0.34
TMEM258-205ENST00000540434 UNC45AQ9H3U1 944 aa12.9□□□□□ -0.34
TMEM258-205ENST00000540434 EPG5Q9HCE0 2579 aa12.9□□□□□ -0.34
TMEM258-205ENST00000540434 EML1O00423 815 aa12.89□□□□□ -0.35
TMEM258-205ENST00000540434 GJB2P29033 226 aa12.89□□□□□ -0.35
TMEM258-205ENST00000540434 MARCH8Q5T0T0 291 aa12.89□□□□□ -0.35
TMEM258-205ENST00000540434 NEK8Q86SG6 692 aa12.89□□□□□ -0.35
TMEM258-205ENST00000540434 POTEDQ86YR6 584 aa12.89□□□□□ -0.35
TMEM258-205ENST00000540434 ADSSL1Q8N142 457 aa12.89□□□□□ -0.35
TMEM258-205ENST00000540434 C7orf31Q8N865 590 aa12.89□□□□□ -0.35
TMEM258-205ENST00000540434 TRAPPC12Q8WVT3 735 aa12.89□□□□□ -0.35
TMEM258-205ENST00000540434 SDF4Q9BRK5 362 aa12.89□□□□□ -0.35
TMEM258-205ENST00000540434 KCNMB3Q9NPA1 279 aa12.89□□□□□ -0.35
TMEM258-205ENST00000540434 CCNT1O60563 726 aaKnown RBP12.88□□□□□ -0.35
TMEM258-205ENST00000540434 XBP1P17861 261 aa12.88□□□□□ -0.35
TMEM258-205ENST00000540434 ATP2B1P20020 1258 aa12.88□□□□□ -0.35
TMEM258-205ENST00000540434 TOB1P50616 345 aaPredicted RBP12.88□□□□□ -0.35
TMEM258-205ENST00000540434 HMGN5P82970 282 aaKnown RBP12.88□□□□□ -0.35
TMEM258-205ENST00000540434 SIGLEC14Q08ET2 396 aa12.88□□□□□ -0.35
TMEM258-205ENST00000540434 SMAD4Q13485 552 aaKnown RBP12.88□□□□□ -0.35
TMEM258-205ENST00000540434 NBR1Q14596 966 aa12.88□□□□□ -0.35
TMEM258-205ENST00000540434 PLCB4Q15147 1175 aa12.88□□□□□ -0.35
TMEM258-205ENST00000540434 UGCGQ16739 394 aa12.88□□□□□ -0.35
TMEM258-205ENST00000540434 ZNF618Q5T7W0 954 aa12.88□□□□□ -0.35
TMEM258-205ENST00000540434 SWSAP1Q6NVH7 229 aa12.88□□□□□ -0.35
TMEM258-205ENST00000540434 RUFY4Q6ZNE9 571 aa12.88□□□□□ -0.35
TMEM258-205ENST00000540434 FRMD5Q7Z6J6 570 aa12.88□□□□□ -0.35
TMEM258-205ENST00000540434 TMEM192Q8IY95 271 aa12.88□□□□□ -0.35
TMEM258-205ENST00000540434 MYOCDQ8IZQ8 938 aa12.88□□□□□ -0.35
TMEM258-205ENST00000540434 LMBR1Q8WVP7 490 aa12.88□□□□□ -0.35
TMEM258-205ENST00000540434 SAMD11Q96NU1 681 aa12.88□□□□□ -0.35
TMEM258-205ENST00000540434 TMEM60Q9H2L4 133 aa12.88□□□□□ -0.35
TMEM258-205ENST00000540434 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
TMEM258-205ENST00000540434 DDX25Q9UHL0 483 aaKnown RBP12.88□□□□□ -0.35
TMEM258-205ENST00000540434 DMXL1Q9Y485 3027 aa12.88□□□□□ -0.35
TMEM258-205ENST00000540434 GVINP1Q7Z2Y8 2422 aa12.87□□□□□ -0.35
TMEM258-205ENST00000540434 ZBTB42B2RXF5 422 aa12.87□□□□□ -0.35
TMEM258-205ENST00000540434 CHMP2AO43633 222 aa12.87□□□□□ -0.35
TMEM258-205ENST00000540434 ZNF862O60290 1169 aa12.87□□□□□ -0.35
TMEM258-205ENST00000540434 STBD1O95210 358 aa12.87□□□□□ -0.35
TMEM258-205ENST00000540434 INSRRP14616 1297 aa12.87□□□□□ -0.35
TMEM258-205ENST00000540434 NBL1P41271 181 aa12.87□□□□□ -0.35
TMEM258-205ENST00000540434 STAT5BP51692 787 aa12.87□□□□□ -0.35
TMEM258-205ENST00000540434 SETQ01105 290 aaPredicted RBP12.87□□□□□ -0.35
TMEM258-205ENST00000540434 PPP4R3AQ6IN85 833 aa12.87□□□□□ -0.35
TMEM258-205ENST00000540434 MOXD1Q6UVY6 613 aa12.87□□□□□ -0.35
TMEM258-205ENST00000540434 TRMT1LQ7Z2T5 733 aaKnown RBP12.87□□□□□ -0.35
TMEM258-205ENST00000540434 FAM184AQ8NB25 1140 aa12.87□□□□□ -0.35
TMEM258-205ENST00000540434 DBF4BQ8NFT6 615 aa12.87□□□□□ -0.35
TMEM258-205ENST00000540434 GLG1Q92896 1179 aa12.87□□□□□ -0.35
TMEM258-205ENST00000540434 RMDN1Q96DB5 314 aa12.87□□□□□ -0.35
TMEM258-205ENST00000540434 KATNAL1Q9BW62 490 aa12.87□□□□□ -0.35
TMEM258-205ENST00000540434 SMARCAD1Q9H4L7 1026 aa12.87□□□□□ -0.35
TMEM258-205ENST00000540434 TBC1D22BQ9NU19 505 aa12.87□□□□□ -0.35
TMEM258-205ENST00000540434 CD207Q9UJ71 328 aa12.87□□□□□ -0.35
TMEM258-205ENST00000540434 VAV3Q9UKW4 847 aa12.87□□□□□ -0.35
TMEM258-205ENST00000540434 WDR87Q6ZQQ6 2873 aa12.87□□□□□ -0.35
TMEM258-205ENST00000540434 NCOR2Q9Y618 2525 aa12.87□□□□□ -0.35
TMEM258-205ENST00000540434 EMSYQ7Z589 1322 aa12.87□□□□□ -0.35
TMEM258-205ENST00000540434 KAT6AQ92794 2004 aa12.86□□□□□ -0.35
TMEM258-205ENST00000540434 C17orf102A2RUQ5 167 aa12.86□□□□□ -0.35
TMEM258-205ENST00000540434 TMEM150BA6NC51 233 aa12.86□□□□□ -0.35
TMEM258-205ENST00000540434 LOC730098B7Z3J9 87 aa12.86□□□□□ -0.35
TMEM258-205ENST00000540434 GRM6O15303 877 aa12.86□□□□□ -0.35
TMEM258-205ENST00000540434 GALR2O43603 387 aaPredicted RBP12.86□□□□□ -0.35
TMEM258-205ENST00000540434 UPP2O95045 317 aa12.86□□□□□ -0.35
TMEM258-205ENST00000540434 MCM2P49736 904 aa12.86□□□□□ -0.35
TMEM258-205ENST00000540434 SPIRE1Q08AE8 756 aa12.86□□□□□ -0.35
TMEM258-205ENST00000540434 PTK7Q13308 1070 aa12.86□□□□□ -0.35
TMEM258-205ENST00000540434 TRIM29Q14134 588 aa12.86□□□□□ -0.35
TMEM258-205ENST00000540434 LRCH2Q5VUJ6 765 aa12.86□□□□□ -0.35
TMEM258-205ENST00000540434 ZNF746Q6NUN9 644 aaPredicted RBP12.86□□□□□ -0.35
TMEM258-205ENST00000540434 PLPPR4Q7Z2D5 763 aa12.86□□□□□ -0.35
TMEM258-205ENST00000540434 SERINC5Q86VE9 423 aa12.86□□□□□ -0.35
TMEM258-205ENST00000540434 C4orf32Q8N8J7 132 aa12.86□□□□□ -0.35
TMEM258-205ENST00000540434 ATP6V0A1Q93050 837 aa12.86□□□□□ -0.35
TMEM258-205ENST00000540434 RIT2Q99578 217 aa12.86□□□□□ -0.35
TMEM258-205ENST00000540434 IRF2BPLQ9H1B7 796 aa12.86□□□□□ -0.35
TMEM258-205ENST00000540434 WRAP73Q9P2S5 460 aaPredicted RBP12.86□□□□□ -0.35
TMEM258-205ENST00000540434 GABBR1Q9UBS5 961 aa12.86□□□□□ -0.35
TMEM258-205ENST00000540434 MAFBQ9Y5Q3 323 aaPredicted RBP12.86□□□□□ -0.35
TMEM258-205ENST00000540434 MYH9P35579 1960 aaKnown RBP12.85□□□□□ -0.35
TMEM258-205ENST00000540434 NCK2O43639 380 aa12.85□□□□□ -0.35
TMEM258-205ENST00000540434 GAS7O60861 476 aa12.85□□□□□ -0.35
TMEM258-205ENST00000540434 AMHP03971 560 aa12.85□□□□□ -0.35
TMEM258-205ENST00000540434 U2AF2P26368 475 aaKnown RBP eCLIP12.85□□□□□ -0.35
TMEM258-205ENST00000540434 IGBP1P78318 339 aa12.85□□□□□ -0.35
TMEM258-205ENST00000540434 ZNF174Q15697 407 aa12.85□□□□□ -0.35
TMEM258-205ENST00000540434 GRIK4Q16099 956 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms