RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 FAM228AQ86W67 206 aa13.61□□□□□ -0.23
CBX3P4-202ENST00000540428 FBXL16Q8N461 479 aa13.61□□□□□ -0.23
CBX3P4-202ENST00000540428 FAM167AQ96KS9 214 aa13.61□□□□□ -0.23
CBX3P4-202ENST00000540428 MFSD14AQ96MC6 490 aa13.61□□□□□ -0.23
CBX3P4-202ENST00000540428 OSMRQ99650 979 aa13.61□□□□□ -0.23
CBX3P4-202ENST00000540428 TLE6Q9H808 572 aa13.61□□□□□ -0.23
CBX3P4-202ENST00000540428 ATP6V0A4Q9HBG4 840 aa13.61□□□□□ -0.23
CBX3P4-202ENST00000540428 LZTS1Q9Y250 596 aa13.61□□□□□ -0.23
CBX3P4-202ENST00000540428 MUC6Q6W4X9 2439 aa13.6□□□□□ -0.23
CBX3P4-202ENST00000540428 HOXA2O43364 376 aa13.6□□□□□ -0.23
CBX3P4-202ENST00000540428 PRPF3O43395 683 aaKnown RBP13.6□□□□□ -0.23
CBX3P4-202ENST00000540428 LAG3P18627 525 aa13.6□□□□□ -0.23
CBX3P4-202ENST00000540428 TMOD1P28289 359 aa13.6□□□□□ -0.23
CBX3P4-202ENST00000540428 PLCB3Q01970 1234 aa13.6□□□□□ -0.23
CBX3P4-202ENST00000540428 DSC3Q14574 896 aa13.6□□□□□ -0.23
CBX3P4-202ENST00000540428 PKN1Q16512 942 aa13.6□□□□□ -0.23
CBX3P4-202ENST00000540428 HFE2Q6ZVN8 426 aa13.6□□□□□ -0.23
CBX3P4-202ENST00000540428 CENPQQ7L2Z9 268 aaPredicted RBP13.6□□□□□ -0.23
CBX3P4-202ENST00000540428 BMP8AQ7Z5Y6 402 aa13.6□□□□□ -0.23
CBX3P4-202ENST00000540428 RBM23Q86U06 439 aaKnown RBP13.6□□□□□ -0.23
CBX3P4-202ENST00000540428 THNSL1Q8IYQ7 743 aa13.6□□□□□ -0.23
CBX3P4-202ENST00000540428 COLGALT1Q8NBJ5 622 aa13.6□□□□□ -0.23
CBX3P4-202ENST00000540428 BICD2Q8TD16 824 aa13.6□□□□□ -0.23
CBX3P4-202ENST00000540428 MICAL1Q8TDZ2 1067 aa13.6□□□□□ -0.23
CBX3P4-202ENST00000540428 EDAQ92838 391 aa13.6□□□□□ -0.23
CBX3P4-202ENST00000540428 KCNB2Q92953 911 aa13.6□□□□□ -0.23
CBX3P4-202ENST00000540428 TMEM117Q9H0C3 514 aa13.6□□□□□ -0.23
CBX3P4-202ENST00000540428 TYW1Q9NV66 732 aaKnown RBP13.6□□□□□ -0.23
CBX3P4-202ENST00000540428 GABBR1Q9UBS5 961 aa13.6□□□□□ -0.23
CBX3P4-202ENST00000540428 NAP1L2Q9ULW6 460 aaPredicted RBP13.6□□□□□ -0.23
CBX3P4-202ENST00000540428 BARX2Q9UMQ3 279 aaPredicted RBP13.6□□□□□ -0.23
CBX3P4-202ENST00000540428 WDR64B1ANS9 1081 aa13.59□□□□□ -0.23
CBX3P4-202ENST00000540428 FSCN2O14926 492 aa13.59□□□□□ -0.23
CBX3P4-202ENST00000540428 PPFIA3O75145 1194 aa13.59□□□□□ -0.23
CBX3P4-202ENST00000540428 VTNP04004 478 aa13.59□□□□□ -0.23
CBX3P4-202ENST00000540428 ATF7P17544 494 aaPredicted RBP13.59□□□□□ -0.23
CBX3P4-202ENST00000540428 IBSPP21815 317 aaPredicted RBP13.59□□□□□ -0.23
CBX3P4-202ENST00000540428 DUSP6Q16828 381 aa13.59□□□□□ -0.23
CBX3P4-202ENST00000540428 PRR16Q569H4 304 aa13.59□□□□□ -0.23
CBX3P4-202ENST00000540428 TMEM184AQ6ZMB5 413 aa13.59□□□□□ -0.23
CBX3P4-202ENST00000540428 Q6ZUG5 572 aa13.59□□□□□ -0.23
CBX3P4-202ENST00000540428 METTL13Q8N6R0 699 aa13.59□□□□□ -0.23
CBX3P4-202ENST00000540428 LINC01465Q8N7H1 131 aa13.59□□□□□ -0.23
CBX3P4-202ENST00000540428 CCDC148Q8NFR7 591 aa13.59□□□□□ -0.23
CBX3P4-202ENST00000540428 RASGRP4Q8TDF6 673 aa13.59□□□□□ -0.23
CBX3P4-202ENST00000540428 FBXL18Q96ME1 805 aa13.59□□□□□ -0.23
CBX3P4-202ENST00000540428 MAP7D2Q96T17 732 aa13.59□□□□□ -0.23
CBX3P4-202ENST00000540428 PHF7Q9BWX1 381 aaPredicted RBP13.59□□□□□ -0.23
CBX3P4-202ENST00000540428 RNF26Q9BY78 433 aaPredicted RBP13.59□□□□□ -0.23
CBX3P4-202ENST00000540428 AGXT2Q9BYV1 514 aa13.59□□□□□ -0.23
CBX3P4-202ENST00000540428 CWH43Q9H720 699 aa13.59□□□□□ -0.23
CBX3P4-202ENST00000540428 PUF60Q9UHX1 559 aaKnown RBP13.59□□□□□ -0.23
CBX3P4-202ENST00000540428 USP15Q9Y4E8 981 aaPredicted RBP13.59□□□□□ -0.23
CBX3P4-202ENST00000540428 PCDHGC5Q9Y5F6 944 aa13.59□□□□□ -0.23
CBX3P4-202ENST00000540428 PIEZO1Q92508 2521 aa13.58□□□□□ -0.23
CBX3P4-202ENST00000540428 SRGAP2BP0DMP2 458 aa13.58□□□□□ -0.24
CBX3P4-202ENST00000540428 FGFR1P11362 822 aa13.58□□□□□ -0.24
CBX3P4-202ENST00000540428 ZSCAN20P17040 1043 aaPredicted RBP13.58□□□□□ -0.24
CBX3P4-202ENST00000540428 EIF4BP23588 611 aaKnown RBP13.58□□□□□ -0.24
CBX3P4-202ENST00000540428 ERVFC1P60507 584 aa13.58□□□□□ -0.24
CBX3P4-202ENST00000540428 AKAP17AQ02040 695 aaKnown RBP13.58□□□□□ -0.24
CBX3P4-202ENST00000540428 NHLH1Q02575 133 aa13.58□□□□□ -0.24
CBX3P4-202ENST00000540428 APOBRQ0VD83 1088 aa13.58□□□□□ -0.24
CBX3P4-202ENST00000540428 ALYREFQ86V81 257 aaKnown RBP13.58□□□□□ -0.24
CBX3P4-202ENST00000540428 SUSD6Q92537 303 aa13.58□□□□□ -0.24
CBX3P4-202ENST00000540428 MRPS27Q92552 414 aaKnown RBP13.58□□□□□ -0.24
CBX3P4-202ENST00000540428 BRF1Q92994 677 aa13.58□□□□□ -0.24
CBX3P4-202ENST00000540428 LENG9Q96B70 501 aa13.58□□□□□ -0.24
CBX3P4-202ENST00000540428 PPP1R16BQ96T49 567 aa13.58□□□□□ -0.24
CBX3P4-202ENST00000540428 ADAMTS10Q9H324 1103 aa13.58□□□□□ -0.24
CBX3P4-202ENST00000540428 NGRNQ9NPE2 291 aaKnown RBP13.58□□□□□ -0.24
CBX3P4-202ENST00000540428 NRBP2Q9NSY0 501 aa13.58□□□□□ -0.24
CBX3P4-202ENST00000540428 SAMM50Q9Y512 469 aa13.58□□□□□ -0.24
CBX3P4-202ENST00000540428 KIAA1671Q9BY89 1806 aa13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 PER2O15055 1255 aa13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 ADAMTS3O15072 1205 aa13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 OATP04181 439 aa13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 SFNP31947 248 aa13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 HSPA4P34932 840 aa13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 PPM1AP35813 382 aa13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 USP11P51784 963 aa13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 CLCN3P51790 818 aa13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 NLRP11P59045 1033 aaKnown RBP13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 KCNC3Q14003 757 aa13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 NTRK3Q16288 839 aa13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 EFCAB12Q6NXP0 572 aa13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 BLOC1S2Q6QNY1 142 aa13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 TRIM67Q6ZTA4 783 aa13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 TRMT1LQ7Z2T5 733 aaKnown RBP13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 ABI1Q8IZP0 508 aa13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 LRRC43Q8N309 656 aa13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 VN1R2Q8NFZ6 395 aa13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 JAKMIP1Q96N16 626 aaKnown RBP13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 CASD1Q96PB1 797 aa13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 RIT2Q99578 217 aa13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 DISC1Q9NRI5 854 aa13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 AKT3Q9Y243 479 aa13.57□□□□□ -0.24
CBX3P4-202ENST00000540428 ZNF862O60290 1169 aa13.56□□□□□ -0.24
CBX3P4-202ENST00000540428 CPA1P15085 419 aa13.56□□□□□ -0.24
CBX3P4-202ENST00000540428 IFNAR1P17181 557 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms