RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 MSH4O15457 936 aa13.22□□□□□ -0.29
CYB561A3-215ENST00000540317 PLA2G4BP0C869 781 aa13.22□□□□□ -0.29
CYB561A3-215ENST00000540317 RAG1P15918 1043 aa13.22□□□□□ -0.29
CYB561A3-215ENST00000540317 LRRC63Q05C16 580 aa13.22□□□□□ -0.29
CYB561A3-215ENST00000540317 STK4Q13043 487 aa13.22□□□□□ -0.29
CYB561A3-215ENST00000540317 DUSP28Q4G0W2 176 aa13.22□□□□□ -0.29
CYB561A3-215ENST00000540317 CENPPQ6IPU0 288 aa13.22□□□□□ -0.29
CYB561A3-215ENST00000540317 NIPA1Q7RTP0 329 aa13.22□□□□□ -0.29
CYB561A3-215ENST00000540317 ANKRD33Q7Z3H0 272 aa13.22□□□□□ -0.29
CYB561A3-215ENST00000540317 CNGA4Q8IV77 575 aa13.22□□□□□ -0.29
CYB561A3-215ENST00000540317 CSGALNACT2Q8N6G5 542 aa13.22□□□□□ -0.29
CYB561A3-215ENST00000540317 LRCH3Q96II8 777 aa13.22□□□□□ -0.29
CYB561A3-215ENST00000540317 TOX2Q96NM4 488 aa13.22□□□□□ -0.29
CYB561A3-215ENST00000540317 TAAR1Q96RJ0 339 aa13.22□□□□□ -0.29
CYB561A3-215ENST00000540317 SRRTQ9BXP5 876 aaKnown RBP13.22□□□□□ -0.29
CYB561A3-215ENST00000540317 MAF1Q9H063 256 aa13.22□□□□□ -0.29
CYB561A3-215ENST00000540317 DNM3Q9UQ16 869 aa13.22□□□□□ -0.29
CYB561A3-215ENST00000540317 Q9Y3F1 56 aa13.22□□□□□ -0.29
CYB561A3-215ENST00000540317 PAXBP1Q9Y5B6 917 aa13.22□□□□□ -0.29
CYB561A3-215ENST00000540317 IGLV3-22A0A075B6J6 115 aa13.21□□□□□ -0.29
CYB561A3-215ENST00000540317 A0A0U1RQG5 324 aaPredicted RBP13.21□□□□□ -0.29
CYB561A3-215ENST00000540317 EHHADHQ08426 723 aa13.21□□□□□ -0.29
CYB561A3-215ENST00000540317 FAAP100Q0VG06 881 aa13.21□□□□□ -0.29
CYB561A3-215ENST00000540317 PTPN14Q15678 1187 aa13.21□□□□□ -0.29
CYB561A3-215ENST00000540317 CEP55Q53EZ4 464 aa13.21□□□□□ -0.29
CYB561A3-215ENST00000540317 SZT2Q5T011 3432 aa13.21□□□□□ -0.29
CYB561A3-215ENST00000540317 MROH7Q68CQ1 1323 aa13.21□□□□□ -0.29
CYB561A3-215ENST00000540317 NCAPH2Q6IBW4 605 aa13.21□□□□□ -0.29
CYB561A3-215ENST00000540317 KCNK18Q7Z418 384 aa13.21□□□□□ -0.29
CYB561A3-215ENST00000540317 SYTL5Q8TDW5 730 aaPredicted RBP13.21□□□□□ -0.29
CYB561A3-215ENST00000540317 NSUN6Q8TEA1 469 aaKnown RBP13.21□□□□□ -0.29
CYB561A3-215ENST00000540317 RMDN3Q96TC7 470 aa13.21□□□□□ -0.29
CYB561A3-215ENST00000540317 TSG101Q99816 390 aa13.21□□□□□ -0.29
CYB561A3-215ENST00000540317 BAG1Q99933 345 aaPredicted RBP13.21□□□□□ -0.29
CYB561A3-215ENST00000540317 DUSP9Q99956 384 aaKnown RBP13.21□□□□□ -0.29
CYB561A3-215ENST00000540317 TUFT1Q9NNX1 390 aa13.21□□□□□ -0.29
CYB561A3-215ENST00000540317 LAMA3Q16787 3333 aa13.21□□□□□ -0.3
CYB561A3-215ENST00000540317 A0A1W2PQC6 194 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 GOLGA6L9A6NEM1 432 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 LGALS16A8MUM7 142 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 ARVCFO00192 962 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 TEX33O43247 280 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 ZSCAN12O43309 604 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 CABYRO75952 493 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 TXNP10599 105 aaKnown RBP13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 TNNT1P13805 278 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 IDEP14735 1019 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 EDNRBP24530 442 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 NKX3-2P78367 333 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 PPP2R5CQ13362 524 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 ECM1Q16610 540 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 LRIT3Q3SXY7 679 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 ARHGEF16Q5VV41 709 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 DYMQ7RTS9 669 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 IRF2BP1Q8IU81 584 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 TC2NQ8N9U0 490 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 KIAA0895Q8NCT3 520 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 SCFD2Q8WU76 684 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 SLC5A5Q92911 643 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 DNAJC19Q96DA6 116 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 IQCDQ96DY2 449 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 SLC39A2Q9NP94 309 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 PANK4Q9NVE7 773 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 VAV3Q9UKW4 847 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 RBM47A0AV96 593 aaKnown RBP13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 POTEB3A0JP26 581 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 TRIM49BA6NDI0 452 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 MEIS1O00470 390 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 MED24O75448 989 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 ITGB8P26012 769 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 DNM2P50570 870 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 CDK7P50613 346 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 PMS1P54277 932 aaKnown RBP13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 SLC12A3P55017 1021 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 COASYQ13057 564 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 TTLL4Q14679 1199 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 STXBP2Q15833 593 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 BRDTQ58F21 947 aaPredicted RBP13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 LRCH2Q5VUJ6 765 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 E4F1Q66K89 784 aaPredicted RBP13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 ANKRD40Q6AI12 368 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 POTEBQ6S5H4 581 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 SEPT14Q6ZU15 432 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 NYAP1Q6ZVC0 841 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 GPBP1Q86WP2 473 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 CATSPER3Q86XQ3 398 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 SYT2Q8N9I0 419 aaPredicted RBP13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 OR6J1Q8NGC5 347 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 GJA10Q969M2 543 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 IWS1Q96ST2 819 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 TAB2Q9NYJ8 693 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 COL20A1Q9P218 1284 aa13.2□□□□□ -0.3
CYB561A3-215ENST00000540317 FRMD3A2A2Y4 597 aa13.19□□□□□ -0.3
CYB561A3-215ENST00000540317 E9PMD0 336 aa13.19□□□□□ -0.3
CYB561A3-215ENST00000540317 KIAA0355O15063 1070 aa13.19□□□□□ -0.3
CYB561A3-215ENST00000540317 TLR3O15455 904 aaKnown RBP13.19□□□□□ -0.3
CYB561A3-215ENST00000540317 PSMD10O75832 226 aa13.19□□□□□ -0.3
CYB561A3-215ENST00000540317 SSBP05455 408 aaKnown RBP eCLIP13.19□□□□□ -0.3
CYB561A3-215ENST00000540317 SPATA31C1P0DKV0 1188 aa13.19□□□□□ -0.3
CYB561A3-215ENST00000540317 CYP11B2P19099 503 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms