RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 LONP1P36776 959 aaKnown RBP7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 CCT6AP40227 531 aaKnown RBP7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 MAGEA10P43363 369 aaPredicted RBP7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 NPEPPSP55786 919 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 MDM2Q00987 491 aaPredicted RBP7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 DNM1Q05193 864 aaKnown RBP7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 MGAT3Q09327 533 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 ECM1Q16610 540 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 FOXD4L6Q3SYB3 417 aaPredicted RBP7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 MTERF2Q49AM1 385 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 HYIQ5T013 277 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 ZNF618Q5T7W0 954 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 PRPF38BQ5VTL8 546 aaKnown RBP7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 ATL3Q6DD88 541 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 MFSD5Q6N075 450 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 FOXD4L3Q6VB84 417 aaPredicted RBP7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 LRRC8DQ7L1W4 858 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 RPAINQ86UA6 219 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 SNX29Q8TEQ0 813 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 BADQ92934 168 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 SCLYQ96I15 445 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 AK8Q96MA6 479 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 GDF15Q99988 308 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 SH2D3AQ9BRG2 576 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 CYP26B1Q9NR63 512 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 DAXXQ9UER7 740 aaPredicted RBP7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 PPME1Q9Y570 386 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 PCDHA2Q9Y5H9 948 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 SRPRBQ9Y5M8 271 aaKnown RBP7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 STK24Q9Y6E0 443 aa7.8□□□□□ -1.16
LPCAT3-209ENST00000540060 KDM3AQ9Y4C1 1321 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 IGKV6-21A0A0C4DH24 114 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 DDX11L8A8MPP1 907 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 SPTLC2O15270 562 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 MAGEB2O15479 319 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 PPP6R2O75170 966 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 MAFO75444 373 aaPredicted RBP7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 RPLP2P05387 115 aaKnown RBP7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 CTSHP09668 335 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 IQCF3P0C7M6 154 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 CSF2RAP15509 400 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 MARCKSP29966 332 aaPredicted RBP7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 RFC2P35250 354 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 THPOP40225 353 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 RARRES1P49788 294 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 CCL23P55773 120 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 NUCB2P80303 420 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 MRPS6P82932 125 aaKnown RBP7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 FPGSQ05932 587 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 TBC1D8BQ0IIM8 1120 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 GRB10Q13322 594 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 MBTPS1Q14703 1052 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 STK38Q15208 465 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 XKR9Q5GH70 373 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 FAM26DQ5JW98 314 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 KRT79Q5XKE5 535 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 OTUD6AQ7L8S5 288 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 KIAA0319LQ8IZA0 1049 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 LRRC71Q8N4P6 559 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 TMEM199Q8N511 208 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 KRI1Q8N9T8 703 aaKnown RBP7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 PIGOQ8TEQ8 1089 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 DNAJB3Q8WWF6 145 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 VWCEQ96DN2 955 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 CHAMP1Q96JM3 812 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 CEP170P1Q96L14 293 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 LBHD1Q9BQE6 289 aaPredicted RBP7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 FAM49AQ9H0Q0 323 aaPredicted RBP7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 CSRNP2Q9H175 543 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 PRO3102Q9H379 93 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 DHX33Q9H6R0 707 aaKnown RBP7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 ANKEF1Q9NU02 776 aa7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 DDX19AQ9NUU7 478 aaKnown RBP7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 TFIP11Q9UBB9 837 aaKnown RBP7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 DBR1Q9UK59 544 aaKnown RBP7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 RBM19Q9Y4C8 960 aaKnown RBP7.79□□□□□ -1.16
LPCAT3-209ENST00000540060 A0A087WWV3 80 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 RSPH10B2B2RC85 870 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 LCE2BO14633 110 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 SLC26A4O43511 780 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 GAS2O43903 313 aaKnown RBP7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 NBNO60934 754 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 PARNO95453 639 aaKnown RBP7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 CHRNA1P02708 482 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 CXCL10P02778 98 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 RSPH10BP0C881 870 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 XRCC6P12956 609 aaKnown RBP eCLIP7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 BMP8BP34820 402 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 RFC5P40937 340 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 CLCN3P51790 818 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 POLGP54098 1239 aaPredicted RBP7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 EPHB4P54760 987 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 PPIGQ13427 754 aaKnown RBP eCLIP7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 DRP2Q13474 957 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 GPNMBQ14956 572 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 EMC2Q15006 297 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 TMEM119Q4V9L6 283 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 EFCAB12Q6NXP0 572 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 USP49Q70CQ1 688 aa7.78□□□□□ -1.16
LPCAT3-209ENST00000540060 KCNK18Q7Z418 384 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms