RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 GPR27Q9NS67 375 aa7.28□□□□□ -1.24
MRE11-209ENST00000540013 FBXO2Q9UK22 296 aaPredicted RBP7.28□□□□□ -1.24
MRE11-209ENST00000540013 TNKSO95271 1327 aa7.27□□□□□ -1.24
MRE11-209ENST00000540013 ARHGAP31Q2M1Z3 1444 aa7.27□□□□□ -1.24
MRE11-209ENST00000540013 SRGAP3O43295 1099 aa7.27□□□□□ -1.25
MRE11-209ENST00000540013 PIP5K1CO60331 668 aa7.27□□□□□ -1.25
MRE11-209ENST00000540013 VDRP11473 427 aa7.27□□□□□ -1.25
MRE11-209ENST00000540013 NAT1P18440 290 aa7.27□□□□□ -1.25
MRE11-209ENST00000540013 CYP4F3Q08477 520 aa7.27□□□□□ -1.25
MRE11-209ENST00000540013 SAFBQ15424 915 aaKnown RBP eCLIP7.27□□□□□ -1.25
MRE11-209ENST00000540013 SLC4A8Q2Y0W8 1093 aa7.27□□□□□ -1.25
MRE11-209ENST00000540013 BICRALQ6AI39 1079 aa7.27□□□□□ -1.25
MRE11-209ENST00000540013 SIRT2Q8IXJ6 389 aa7.27□□□□□ -1.25
MRE11-209ENST00000540013 CNTD1Q8N815 330 aa7.27□□□□□ -1.25
MRE11-209ENST00000540013 VPS37AQ8NEZ2 397 aa7.27□□□□□ -1.25
MRE11-209ENST00000540013 OSBP2Q969R2 916 aa7.27□□□□□ -1.25
MRE11-209ENST00000540013 LIN37Q96GY3 246 aaPredicted RBP7.27□□□□□ -1.25
MRE11-209ENST00000540013 TCF7L1Q9HCS4 588 aa7.27□□□□□ -1.25
MRE11-209ENST00000540013 TNFRSF12AQ9NP84 129 aa7.27□□□□□ -1.25
MRE11-209ENST00000540013 DCP1AQ9NPI6 582 aaPredicted RBP7.27□□□□□ -1.25
MRE11-209ENST00000540013 IP6K2Q9UHH9 426 aa7.27□□□□□ -1.25
MRE11-209ENST00000540013 NUDT5Q9UKK9 219 aa7.27□□□□□ -1.25
MRE11-209ENST00000540013 NPFFR2Q9Y5X5 522 aa7.27□□□□□ -1.25
MRE11-209ENST00000540013 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.27□□□□□ -1.25
MRE11-209ENST00000540013 KANK1Q14678 1352 aa7.27□□□□□ -1.25
MRE11-209ENST00000540013 NEURL4Q96JN8 1562 aa7.27□□□□□ -1.25
MRE11-209ENST00000540013 UBR1Q8IWV7 1749 aa7.27□□□□□ -1.25
MRE11-209ENST00000540013 LMTK2Q8IWU2 1503 aa7.27□□□□□ -1.25
MRE11-209ENST00000540013 VWDEQ8N2E2 1590 aa7.26□□□□□ -1.25
MRE11-209ENST00000540013 IQSEC2Q5JU85 1478 aa7.26□□□□□ -1.25
MRE11-209ENST00000540013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.26□□□□□ -1.25
MRE11-209ENST00000540013 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.26□□□□□ -1.25
MRE11-209ENST00000540013 CYBBP04839 570 aa7.26□□□□□ -1.25
MRE11-209ENST00000540013 CT47B1P0C2W7 299 aaPredicted RBP7.26□□□□□ -1.25
MRE11-209ENST00000540013 GJA9P57773 515 aa7.26□□□□□ -1.25
MRE11-209ENST00000540013 MLANAQ16655 118 aa7.26□□□□□ -1.25
MRE11-209ENST00000540013 COBLL1Q53SF7 1204 aa7.26□□□□□ -1.25
MRE11-209ENST00000540013 HYIQ5T013 277 aa7.26□□□□□ -1.25
MRE11-209ENST00000540013 PAQR3Q6TCH7 311 aa7.26□□□□□ -1.25
MRE11-209ENST00000540013 MMS22LQ6ZRQ5 1243 aa7.26□□□□□ -1.25
MRE11-209ENST00000540013 USP53Q70EK8 1073 aa7.26□□□□□ -1.25
MRE11-209ENST00000540013 MAMDC2Q7Z304 686 aaPredicted RBP7.26□□□□□ -1.25
MRE11-209ENST00000540013 TPH2Q8IWU9 490 aa7.26□□□□□ -1.25
MRE11-209ENST00000540013 THEMISQ8N1K5 641 aaPredicted RBP7.26□□□□□ -1.25
MRE11-209ENST00000540013 TTC17Q96AE7 1141 aa7.26□□□□□ -1.25
MRE11-209ENST00000540013 NSUN3Q9H649 340 aaKnown RBP7.26□□□□□ -1.25
MRE11-209ENST00000540013 POLG2Q9UHN1 485 aa7.26□□□□□ -1.25
MRE11-209ENST00000540013 ASAP1Q9ULH1 1129 aa7.26□□□□□ -1.25
MRE11-209ENST00000540013 PNMA8BQ9ULN7 279 aaPredicted RBP7.26□□□□□ -1.25
MRE11-209ENST00000540013 IPPQ9Y573 584 aa7.26□□□□□ -1.25
MRE11-209ENST00000540013 ANKRD50Q9ULJ7 1429 aa7.26□□□□□ -1.25
MRE11-209ENST00000540013 ZNF335Q9H4Z2 1342 aaPredicted RBP7.26□□□□□ -1.25
MRE11-209ENST00000540013 APAF1O14727 1248 aa7.25□□□□□ -1.25
MRE11-209ENST00000540013 PEX10O60683 326 aa7.25□□□□□ -1.25
MRE11-209ENST00000540013 DDIT3P35638 169 aa7.25□□□□□ -1.25
MRE11-209ENST00000540013 LSAMPQ13449 338 aa7.25□□□□□ -1.25
MRE11-209ENST00000540013 PUM3Q15397 648 aaKnown RBP7.25□□□□□ -1.25
MRE11-209ENST00000540013 YOD1Q5VVQ6 348 aaPredicted RBP7.25□□□□□ -1.25
MRE11-209ENST00000540013 STYK1Q6J9G0 422 aa7.25□□□□□ -1.25
MRE11-209ENST00000540013 PKN3Q6P5Z2 889 aa7.25□□□□□ -1.25
MRE11-209ENST00000540013 ANKLE2Q86XL3 938 aa7.25□□□□□ -1.25
MRE11-209ENST00000540013 NETO2Q8NC67 525 aa7.25□□□□□ -1.25
MRE11-209ENST00000540013 FBXO15Q8NCQ5 510 aaPredicted RBP7.25□□□□□ -1.25
MRE11-209ENST00000540013 SKA1Q96BD8 255 aa7.25□□□□□ -1.25
MRE11-209ENST00000540013 MPP4Q96JB8 637 aa7.25□□□□□ -1.25
MRE11-209ENST00000540013 GPR101Q96P66 508 aaPredicted RBP7.25□□□□□ -1.25
MRE11-209ENST00000540013 RSPH9Q9H1X1 276 aaPredicted RBP7.25□□□□□ -1.25
MRE11-209ENST00000540013 ZNF552Q9H707 407 aaPredicted RBP7.25□□□□□ -1.25
MRE11-209ENST00000540013 C9orf78Q9NZ63 289 aaPredicted RBP7.25□□□□□ -1.25
MRE11-209ENST00000540013 GULP1Q9UBP9 304 aa7.25□□□□□ -1.25
MRE11-209ENST00000540013 PGAP2Q9UHJ9 254 aa7.25□□□□□ -1.25
MRE11-209ENST00000540013 RCAN3Q9UKA8 241 aa7.25□□□□□ -1.25
MRE11-209ENST00000540013 LUC7L2Q9Y383 392 aaKnown RBP7.25□□□□□ -1.25
MRE11-209ENST00000540013 IQGAP1P46940 1657 aa7.25□□□□□ -1.25
MRE11-209ENST00000540013 EFCAB6Q5THR3 1501 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 DYTNA2CJ06 578 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 H7BY64 318 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 AQP7O14520 342 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 ERC2O15083 957 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 NBNO60934 754 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 FARP2O94887 1054 aaPredicted RBP7.24□□□□□ -1.25
MRE11-209ENST00000540013 EFEMP2O95967 443 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 GABREP78334 506 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 CHAF1AQ13111 956 aaPredicted RBP7.24□□□□□ -1.25
MRE11-209ENST00000540013 STK3Q13188 491 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 INF2Q27J81 1249 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 FAM209AQ5JX71 171 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 MROH9Q5TGP6 573 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 MBLAC2Q68D91 279 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 CCDC103Q8IW40 242 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 RCBTB1Q8NDN9 531 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 PTPRN2Q92932 1015 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 TMEM169Q96HH4 297 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 DIRC2Q96SL1 478 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 TTC1Q99614 292 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 PHF20Q9BVI0 1012 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 CSRNP2Q9H175 543 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 MARCH2Q9P0N8 246 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 PHTF1Q9UMS5 762 aa7.24□□□□□ -1.25
MRE11-209ENST00000540013 COA3Q9Y2R0 106 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms