RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 PPP1R16BQ96T49 567 aa18.91■□□□□ 0.62
DDB1-215ENST00000539712 KIF2CQ99661 725 aa18.91■□□□□ 0.62
DDB1-215ENST00000539712 NIFKQ9BYG3 293 aaKnown RBP18.91■□□□□ 0.62
DDB1-215ENST00000539712 NRBP2Q9NSY0 501 aa18.91■□□□□ 0.62
DDB1-215ENST00000539712 ST3GAL5Q9UNP4 418 aa18.91■□□□□ 0.62
DDB1-215ENST00000539712 CEP131Q9UPN4 1083 aa18.91■□□□□ 0.62
DDB1-215ENST00000539712 CCDC194A0A1B0GVG4 234 aa18.9■□□□□ 0.62
DDB1-215ENST00000539712 TMEM150BA6NC51 233 aa18.9■□□□□ 0.62
DDB1-215ENST00000539712 C5orf67F2Z3F1 127 aa18.9■□□□□ 0.62
DDB1-215ENST00000539712 RPS6KA5O75582 802 aa18.9■□□□□ 0.62
DDB1-215ENST00000539712 NFX1Q12986 1120 aaKnown RBP18.9■□□□□ 0.62
DDB1-215ENST00000539712 SKIV2LQ15477 1246 aaKnown RBP18.9■□□□□ 0.62
DDB1-215ENST00000539712 PIK3AP1Q6ZUJ8 805 aa18.9■□□□□ 0.62
DDB1-215ENST00000539712 FAM228AQ86W67 206 aa18.9■□□□□ 0.62
DDB1-215ENST00000539712 LRRC71Q8N4P6 559 aa18.9■□□□□ 0.62
DDB1-215ENST00000539712 FIBCD1Q8N539 461 aa18.9■□□□□ 0.62
DDB1-215ENST00000539712 OSMRQ99650 979 aa18.9■□□□□ 0.62
DDB1-215ENST00000539712 ADGRA3Q8IWK6 1321 aa18.9■□□□□ 0.62
DDB1-215ENST00000539712 EIF5BO60841 1220 aaKnown RBP18.89■□□□□ 0.61
DDB1-215ENST00000539712 XBP1P17861 261 aa18.89■□□□□ 0.61
DDB1-215ENST00000539712 BMPR1AP36894 532 aa18.89■□□□□ 0.61
DDB1-215ENST00000539712 KCNQ1P51787 676 aa18.89■□□□□ 0.61
DDB1-215ENST00000539712 PPP2R5CQ13362 524 aa18.89■□□□□ 0.61
DDB1-215ENST00000539712 DRP2Q13474 957 aa18.89■□□□□ 0.61
DDB1-215ENST00000539712 GPM6BQ13491 265 aa18.89■□□□□ 0.61
DDB1-215ENST00000539712 C8orf34Q49A92 452 aa18.89■□□□□ 0.61
DDB1-215ENST00000539712 NPAS4Q8IUM7 802 aa18.89■□□□□ 0.61
DDB1-215ENST00000539712 WASF1Q92558 559 aa18.89■□□□□ 0.61
DDB1-215ENST00000539712 MRPL38Q96DV4 380 aaKnown RBP18.89■□□□□ 0.61
DDB1-215ENST00000539712 FAM20AQ96MK3 541 aa18.89■□□□□ 0.61
DDB1-215ENST00000539712 COG5Q9UP83 839 aa18.89■□□□□ 0.61
DDB1-215ENST00000539712 NLRC5Q86WI3 1866 aa18.88■□□□□ 0.61
DDB1-215ENST00000539712 IGKV6-21A0A0C4DH24 114 aa18.88■□□□□ 0.61
DDB1-215ENST00000539712 GCFC2P16383 781 aaKnown RBP18.88■□□□□ 0.61
DDB1-215ENST00000539712 GATMP50440 423 aa18.88■□□□□ 0.61
DDB1-215ENST00000539712 NLRP11P59045 1033 aaKnown RBP18.88■□□□□ 0.61
DDB1-215ENST00000539712 DSC3Q14574 896 aa18.88■□□□□ 0.61
DDB1-215ENST00000539712 XKR3Q5GH77 459 aa18.88■□□□□ 0.61
DDB1-215ENST00000539712 FAM43BQ6ZT52 329 aaPredicted RBP18.88■□□□□ 0.61
DDB1-215ENST00000539712 ADAMTS19Q8TE59 1207 aa18.88■□□□□ 0.61
DDB1-215ENST00000539712 ADAM2Q99965 735 aa18.88■□□□□ 0.61
DDB1-215ENST00000539712 SH2D3AQ9BRG2 576 aa18.88■□□□□ 0.61
DDB1-215ENST00000539712 RGS18Q9NS28 235 aa18.88■□□□□ 0.61
DDB1-215ENST00000539712 WRAP73Q9P2S5 460 aaPredicted RBP18.88■□□□□ 0.61
DDB1-215ENST00000539712 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.87■□□□□ 0.61
DDB1-215ENST00000539712 C9IYK1 514 aa18.87■□□□□ 0.61
DDB1-215ENST00000539712 WNT7AO00755 349 aa18.87■□□□□ 0.61
DDB1-215ENST00000539712 GPR182O15218 404 aa18.87■□□□□ 0.61
DDB1-215ENST00000539712 CCNT1O60563 726 aaKnown RBP18.87■□□□□ 0.61
DDB1-215ENST00000539712 SARSP49591 514 aaKnown RBP18.87■□□□□ 0.61
DDB1-215ENST00000539712 FAM189BP81408 668 aa18.87■□□□□ 0.61
DDB1-215ENST00000539712 SPIRE1Q08AE8 756 aa18.87■□□□□ 0.61
DDB1-215ENST00000539712 BTG3Q14201 252 aaPredicted RBP18.87■□□□□ 0.61
DDB1-215ENST00000539712 RALGAPA2Q2PPJ7 1873 aa18.87■□□□□ 0.61
DDB1-215ENST00000539712 ANO5Q75V66 913 aa18.87■□□□□ 0.61
DDB1-215ENST00000539712 BANK1Q8NDB2 785 aa18.87■□□□□ 0.61
DDB1-215ENST00000539712 HLA-CQ95604 372 aa18.87■□□□□ 0.61
DDB1-215ENST00000539712 MRPL42Q9Y6G3 142 aaKnown RBP18.87■□□□□ 0.61
DDB1-215ENST00000539712 BTBD18B2RXH4 712 aa18.86■□□□□ 0.61
DDB1-215ENST00000539712 TBX3O15119 743 aa18.86■□□□□ 0.61
DDB1-215ENST00000539712 GRM6O15303 877 aa18.86■□□□□ 0.61
DDB1-215ENST00000539712 RB1P06400 928 aa18.86■□□□□ 0.61
DDB1-215ENST00000539712 CTNNB1P35222 781 aa18.86■□□□□ 0.61
DDB1-215ENST00000539712 KRT2P35908 639 aa18.86■□□□□ 0.61
DDB1-215ENST00000539712 GPC3P51654 580 aa18.86■□□□□ 0.61
DDB1-215ENST00000539712 SLC24A5Q71RS6 500 aa18.86■□□□□ 0.61
DDB1-215ENST00000539712 CMTR2Q8IYT2 770 aaKnown RBP18.86■□□□□ 0.61
DDB1-215ENST00000539712 ZNF668Q96K58 619 aaPredicted RBP18.86■□□□□ 0.61
DDB1-215ENST00000539712 SEPT9Q9UHD8 586 aaPredicted RBP18.86■□□□□ 0.61
DDB1-215ENST00000539712 AKT3Q9Y243 479 aa18.86■□□□□ 0.61
DDB1-215ENST00000539712 TCF20Q9UGU0 1960 aaKnown RBP18.86■□□□□ 0.61
DDB1-215ENST00000539712 MMP1P03956 469 aa18.85■□□□□ 0.61
DDB1-215ENST00000539712 STAG3L1P0CL83 205 aa18.85■□□□□ 0.61
DDB1-215ENST00000539712 EIF4BP23588 611 aaKnown RBP18.85■□□□□ 0.61
DDB1-215ENST00000539712 TMOD1P28289 359 aa18.85■□□□□ 0.61
DDB1-215ENST00000539712 PSMC5P62195 406 aa18.85■□□□□ 0.61
DDB1-215ENST00000539712 TBC1D8BQ0IIM8 1120 aa18.85■□□□□ 0.61
DDB1-215ENST00000539712 CAMK1Q14012 370 aa18.85■□□□□ 0.61
DDB1-215ENST00000539712 COL19A1Q14993 1142 aa18.85■□□□□ 0.61
DDB1-215ENST00000539712 MTERF2Q49AM1 385 aa18.85■□□□□ 0.61
DDB1-215ENST00000539712 ZNF579Q8NAF0 562 aaKnown RBP18.85■□□□□ 0.61
DDB1-215ENST00000539712 NECAB3Q96P71 396 aaPredicted RBP18.85■□□□□ 0.61
DDB1-215ENST00000539712 MAP7D2Q96T17 732 aa18.85■□□□□ 0.61
DDB1-215ENST00000539712 LIMCH1Q9UPQ0 1083 aa18.85■□□□□ 0.61
DDB1-215ENST00000539712 C5orf42Q9H799 3197 aa18.84■□□□□ 0.61
DDB1-215ENST00000539712 DDX11L8A8MPP1 907 aa18.84■□□□□ 0.61
DDB1-215ENST00000539712 MAFO75444 373 aaPredicted RBP18.84■□□□□ 0.61
DDB1-215ENST00000539712 DARSP14868 501 aaKnown RBP18.84■□□□□ 0.61
DDB1-215ENST00000539712 QARSP47897 775 aaKnown RBP18.84■□□□□ 0.61
DDB1-215ENST00000539712 PTPROQ16827 1216 aa18.84■□□□□ 0.61
DDB1-215ENST00000539712 AAK1Q2M2I8 961 aa18.84■□□□□ 0.61
DDB1-215ENST00000539712 PAN2Q504Q3 1202 aaKnown RBP18.84■□□□□ 0.61
DDB1-215ENST00000539712 FAM102BQ5T8I3 360 aa18.84■□□□□ 0.61
DDB1-215ENST00000539712 ZNF710Q8N1W2 664 aa18.84■□□□□ 0.61
DDB1-215ENST00000539712 C1orf112Q9NSG2 853 aa18.84■□□□□ 0.61
DDB1-215ENST00000539712 RWDD3Q9Y3V2 267 aa18.84■□□□□ 0.61
DDB1-215ENST00000539712 ATG2AQ2TAZ0 1938 aa18.84■□□□□ 0.61
DDB1-215ENST00000539712 DENND3A2RUS2 1198 aa18.83■□□□□ 0.6
DDB1-215ENST00000539712 DNAJB1P25685 340 aa18.83■□□□□ 0.6
DDB1-215ENST00000539712 FOSBP53539 338 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms