RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 DCTN3O75935 186 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 GPC3P51654 580 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 KRT33BQ14525 404 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 PDCD2Q16342 344 aaPredicted RBP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 HLFQ16534 295 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 TAB3Q8N5C8 712 aaPredicted RBP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 RAD54LQ92698 747 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 ALDH8A1Q9H2A2 487 aaPredicted RBP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 CYP2D7A0A087X1C5 515 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 PVALEFA0A1B0GWK0 134 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 LGALS16A8MUM7 142 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 RASGRF2O14827 1237 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 GGPS1O95749 300 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 DEUP1Q05D60 604 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 DHX9Q08211 1270 aaKnown RBP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 SPARCL1Q14515 664 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 C2orf69Q8N8R5 385 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 TMEM35BQ8NCS4 154 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 OR6B3Q8NGW1 331 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 TIPINQ9BVW5 301 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 BHMT2Q9H2M3 363 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 FAM96AQ9H5X1 160 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 LY9Q9HBG7 655 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 ABHD10Q9NUJ1 306 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 SPTLC3Q9NUV7 552 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 SESN3P58005 492 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 DRP2Q13474 957 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 TSTA3Q13630 321 aaPredicted RBP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 XXYLT1Q8NBI6 393 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 PARD3BQ8TEW8 1205 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 CD209Q9NNX6 404 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 ZNF335Q9H4Z2 1342 aaPredicted RBP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 ZRANB2O95218 330 aaKnown RBP eCLIP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 OSTNP61366 133 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 ZNF699Q32M78 642 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 TOGARAM2Q6ZUX3 1019 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 EXOC4Q96A65 974 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 PPWD1Q96BP3 646 aaKnown RBP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 MRPL4Q9BYD3 311 aaKnown RBP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 MAGEB5Q9BZ81 275 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 MRPL40Q9NQ50 206 aaKnown RBP6.95□□□□□ -1.3
LSAMP-207ENST00000539563 BARHL2Q9NY43 387 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 ANAPC7Q9UJX3 599 aa6.95□□□□□ -1.3
LSAMP-207ENST00000539563 ATP5HO75947 161 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 MYL3P08590 195 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 NR1H3Q13133 447 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 GRM4Q14833 912 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 KNOP1Q1ED39 458 aaKnown RBP6.94□□□□□ -1.3
LSAMP-207ENST00000539563 Q3C1V9 767 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 NAALADL2Q58DX5 795 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 KCNV1Q6PIU1 500 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 ELMOD1Q8N336 334 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 TRPV6Q9H1D0 765 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 SRP68Q9UHB9 627 aaKnown RBP6.94□□□□□ -1.3
LSAMP-207ENST00000539563 MYBL1P10243 752 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 SMARCA1P28370 1054 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 LIG3P49916 1009 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 USP11P51784 963 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 VAMP7P51809 220 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 TFDP2Q14188 446 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 GAS2L3Q86XJ1 694 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.94□□□□□ -1.3
LSAMP-207ENST00000539563 SPDYE2BA6NHP3 402 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 MMP10P09238 476 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 SPDYE6P0CI01 402 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 ZFXP17010 805 aaPredicted RBP6.94□□□□□ -1.3
LSAMP-207ENST00000539563 TOB2Q14106 344 aaPredicted RBP6.94□□□□□ -1.3
LSAMP-207ENST00000539563 CHMP6Q96FZ7 201 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 TSPYL2Q9H2G4 693 aaPredicted RBP6.94□□□□□ -1.3
LSAMP-207ENST00000539563 ADAM22Q9P0K1 906 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 DNAJC12Q9UKB3 198 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 PRR36Q9H6K5 1346 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 NR1D1P20393 614 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 PHEXP78562 749 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 TTLL4Q14679 1199 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 FAM83BQ5T0W9 1011 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 SCARA5Q6ZMJ2 495 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 CYB5R4Q7L1T6 521 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 CATSPER4Q7RTX7 472 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 SEPT12Q8IYM1 358 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 CCDC138Q96M89 665 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 TMEM47Q9BQJ4 181 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 PARD6BQ9BYG5 372 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 WNT8AQ9H1J5 351 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 GOLGA8IPA6NC78 632 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 GOLGA8JA6NMD2 632 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 SPECC1L-ADORA2AF8WAN1 911 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 AP3M2P53677 418 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 TSPY1Q01534 308 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 ZNF568Q3ZCX4 644 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 TTC19Q6DKK2 380 aaPredicted RBP6.94□□□□□ -1.3
LSAMP-207ENST00000539563 EEPD1Q7L9B9 569 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 DCLK2Q8N568 766 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 KLHL29Q96CT2 875 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 EIF2AQ9BY44 585 aaKnown RBP6.94□□□□□ -1.3
LSAMP-207ENST00000539563 IP6K2Q9UHH9 426 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 HERC5Q9UII4 1024 aaKnown RBP6.94□□□□□ -1.3
LSAMP-207ENST00000539563 TRIM33Q9UPN9 1127 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 P4HBP07237 508 aaKnown RBP6.94□□□□□ -1.3
LSAMP-207ENST00000539563 CDC25AP30304 524 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms