RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 SLC45A1Q9Y2W3 748 aa4.55□□□□□ -1.68
AC055720.1-201ENST00000539552 POLR3KQ9Y2Y1 108 aaPredicted RBP4.55□□□□□ -1.68
AC055720.1-201ENST00000539552 MKI67P46013 3256 aaKnown RBP4.55□□□□□ -1.68
AC055720.1-201ENST00000539552 ZMYM3Q14202 1370 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 TNKSO95271 1327 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 TRBV23-1A0A0A0MS06 115 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 ABHD14A-ACY1A0A1B0GW23 586 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 ANKRD34BA5PLL1 514 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 ORC4O43929 436 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 RHOBTB3O94955 611 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 POLD1P28340 1107 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 GBP1P32455 592 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 ARL4AP40617 200 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 CCNFP41002 786 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 CCT5P48643 541 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 RENBPP51606 427 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 NEK4P51957 841 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 SUMO1P63165 101 aaKnown RBP4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 TBX2Q13207 712 aaPredicted RBP4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 PDE1CQ14123 709 aaPredicted RBP4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 SART3Q15020 963 aaKnown RBP4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 ELF2Q15723 593 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 HEATR6Q6AI08 1181 aaKnown RBP4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 CFAP161Q6P656 301 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 ADAT2Q7Z6V5 191 aaKnown RBP4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 ZSCAN30Q86W11 494 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 FAM129CQ86XR2 697 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 SCUBE1Q8IWY4 988 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 NKAPQ8N5F7 415 aaKnown RBP4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 CNTD1Q8N815 330 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 SLC16A11Q8NCK7 471 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 DDX1Q92499 740 aaKnown RBP4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 ATG4CQ96DT6 458 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 ABHD8Q96I13 439 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 CDK5RAP3Q96JB5 506 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 SNX27Q96L92 541 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 TBATAQ96M53 351 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 CLUHP3Q96NS8 147 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 TSPAN18Q96SJ8 248 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 AARSD1Q9BTE6 412 aaKnown RBP4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 MRPL4Q9BYD3 311 aaKnown RBP4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 GBP3Q9H0R5 595 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 ASCC2Q9H1I8 757 aaPredicted RBP4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 ANTXR1Q9H6X2 564 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 CNNM2Q9H8M5 875 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 SPON1Q9HCB6 807 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 CRTAC1Q9NQ79 661 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 DDX21Q9NR30 783 aaKnown RBP eCLIP4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 IP6K2Q9UHH9 426 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 RCAN3Q9UKA8 241 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 ADAM30Q9UKF2 790 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 MARF1Q9Y4F3 1742 aaKnown RBP4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 USP32Q8NFA0 1604 aa4.54□□□□□ -1.68
AC055720.1-201ENST00000539552 EYSQ5T1H1 3165 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 PRR36Q9H6K5 1346 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 SSU72P8A0A1W2PR75 194 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 FAM83GA6ND36 823 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 UPK3BL1B0FP48 263 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 UPK3BL2E5RIL1 263 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 SDSP20132 328 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 POU3F2P20265 443 aaPredicted RBP4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 L1CAMP32004 1257 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 GDF5P43026 501 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 GRM3Q14832 879 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 SLC9A5Q14940 896 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 GPR158Q5T848 1215 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 RASIP1Q5U651 963 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 TSHZ3Q63HK5 1081 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 SLC6A19Q695T7 634 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 MZT2BQ6NZ67 158 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 CASC1Q6TDU7 716 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 UBE2R2Q712K3 238 aaPredicted RBP4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 MAATS1Q7Z4T9 603 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 TPH2Q8IWU9 490 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 FAM13CQ8NE31 585 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 SMARCC1Q92922 1105 aaPredicted RBP4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 USP7Q93009 1102 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 PGBD4Q96DM1 585 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 TNIP3Q96KP6 325 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 DPH2Q9BQC3 489 aaPredicted RBP4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 CNTD2Q9H8S5 307 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 RIC8AQ9NPQ8 531 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 MAN1C1Q9NR34 630 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 SAGE1Q9NXZ1 904 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 PCDHB10Q9UN67 800 aa4.53□□□□□ -1.68
AC055720.1-201ENST00000539552 ABCC3O15438 1527 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 A0A087WZG4 1122 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 hCG_1984214I3L0E3 225 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 TNFRSF10CO14798 259 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 PMM2O15305 246 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 SNX2O60749 519 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 EFCAB14O75071 495 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 PPM1BO75688 479 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 MPOP05164 745 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 SETSIPP0DME0 302 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 RPL10P27635 214 aaKnown RBP4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 MAGEA10P43363 369 aaPredicted RBP4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 GTF2A2P52657 109 aa4.52□□□□□ -1.69
AC055720.1-201ENST00000539552 GTF2H3Q13889 308 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms