RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 CRIPAKQ8N1N5 446 aa21.48■■□□□ 1.03
TNFRSF1A-212ENST00000539372 RDM1Q8NG50 284 aa21.48■■□□□ 1.03
TNFRSF1A-212ENST00000539372 GTF3C6Q969F1 213 aa21.48■■□□□ 1.03
TNFRSF1A-212ENST00000539372 ZNF668Q96K58 619 aaPredicted RBP21.48■■□□□ 1.03
TNFRSF1A-212ENST00000539372 NECAB3Q96P71 396 aaPredicted RBP21.48■■□□□ 1.03
TNFRSF1A-212ENST00000539372 LRFN2Q9ULH4 789 aa21.48■■□□□ 1.03
TNFRSF1A-212ENST00000539372 TTC28Q96AY4 2481 aa21.48■■□□□ 1.03
TNFRSF1A-212ENST00000539372 NLRC5Q86WI3 1866 aa21.47■■□□□ 1.03
TNFRSF1A-212ENST00000539372 TMEM150BA6NC51 233 aa21.47■■□□□ 1.03
TNFRSF1A-212ENST00000539372 TNFRSF10AO00220 468 aa21.47■■□□□ 1.03
TNFRSF1A-212ENST00000539372 GPR182O15218 404 aa21.47■■□□□ 1.03
TNFRSF1A-212ENST00000539372 STAG3L1P0CL83 205 aa21.47■■□□□ 1.03
TNFRSF1A-212ENST00000539372 EARS2Q5JPH6 523 aaKnown RBP21.47■■□□□ 1.03
TNFRSF1A-212ENST00000539372 B3GNT9Q6UX72 402 aa21.47■■□□□ 1.03
TNFRSF1A-212ENST00000539372 FAM228AQ86W67 206 aa21.47■■□□□ 1.03
TNFRSF1A-212ENST00000539372 LINC01465Q8N7H1 131 aa21.47■■□□□ 1.03
TNFRSF1A-212ENST00000539372 WASF1Q92558 559 aa21.47■■□□□ 1.03
TNFRSF1A-212ENST00000539372 MAP7D2Q96T17 732 aa21.47■■□□□ 1.03
TNFRSF1A-212ENST00000539372 ADAM2Q99965 735 aa21.47■■□□□ 1.03
TNFRSF1A-212ENST00000539372 SEPT9Q9UHD8 586 aaPredicted RBP21.47■■□□□ 1.03
TNFRSF1A-212ENST00000539372 MRPL42Q9Y6G3 142 aaKnown RBP21.47■■□□□ 1.03
TNFRSF1A-212ENST00000539372 DENND3A2RUS2 1198 aa21.46■■□□□ 1.03
TNFRSF1A-212ENST00000539372 CCNT1O60563 726 aaKnown RBP21.46■■□□□ 1.03
TNFRSF1A-212ENST00000539372 EIF5BO60841 1220 aaKnown RBP21.46■■□□□ 1.03
TNFRSF1A-212ENST00000539372 TMOD1P28289 359 aa21.46■■□□□ 1.03
TNFRSF1A-212ENST00000539372 SARSP49591 514 aaKnown RBP21.46■■□□□ 1.03
TNFRSF1A-212ENST00000539372 FOSBP53539 338 aa21.46■■□□□ 1.03
TNFRSF1A-212ENST00000539372 NLRP11P59045 1033 aaKnown RBP21.46■■□□□ 1.03
TNFRSF1A-212ENST00000539372 MTERF2Q49AM1 385 aa21.46■■□□□ 1.03
TNFRSF1A-212ENST00000539372 BANK1Q8NDB2 785 aa21.46■■□□□ 1.03
TNFRSF1A-212ENST00000539372 CLP1Q92989 425 aaKnown RBP21.46■■□□□ 1.03
TNFRSF1A-212ENST00000539372 SH2D3AQ9BRG2 576 aa21.46■■□□□ 1.03
TNFRSF1A-212ENST00000539372 RWDD3Q9Y3V2 267 aa21.46■■□□□ 1.03
TNFRSF1A-212ENST00000539372 WDR81Q562E7 1941 aa21.46■■□□□ 1.03
TNFRSF1A-212ENST00000539372 FAM205CA6NFA0 338 aa21.45■■□□□ 1.02
TNFRSF1A-212ENST00000539372 C5orf67F2Z3F1 127 aa21.45■■□□□ 1.02
TNFRSF1A-212ENST00000539372 EML1O00423 815 aa21.45■■□□□ 1.02
TNFRSF1A-212ENST00000539372 JAK2O60674 1132 aa21.45■■□□□ 1.02
TNFRSF1A-212ENST00000539372 CSPG5O95196 566 aa21.45■■□□□ 1.02
TNFRSF1A-212ENST00000539372 RB1P06400 928 aa21.45■■□□□ 1.02
TNFRSF1A-212ENST00000539372 KRT2P35908 639 aa21.45■■□□□ 1.02
TNFRSF1A-212ENST00000539372 TBC1D8BQ0IIM8 1120 aa21.45■■□□□ 1.02
TNFRSF1A-212ENST00000539372 TIGD5Q53EQ6 642 aa21.45■■□□□ 1.02
TNFRSF1A-212ENST00000539372 ODR4Q5SWX8 454 aa21.45■■□□□ 1.02
TNFRSF1A-212ENST00000539372 CMTR2Q8IYT2 770 aaKnown RBP21.45■■□□□ 1.02
TNFRSF1A-212ENST00000539372 NSUN7Q8NE18 718 aaKnown RBP21.45■■□□□ 1.02
TNFRSF1A-212ENST00000539372 C11orf84Q9BUA3 381 aaPredicted RBP21.45■■□□□ 1.02
TNFRSF1A-212ENST00000539372 ADAMTS10Q9H324 1103 aa21.45■■□□□ 1.02
TNFRSF1A-212ENST00000539372 KCNMB3Q9NPA1 279 aa21.45■■□□□ 1.02
TNFRSF1A-212ENST00000539372 PCDHB7Q9Y5E2 793 aa21.45■■□□□ 1.02
TNFRSF1A-212ENST00000539372 RALGAPA2Q2PPJ7 1873 aa21.45■■□□□ 1.02
TNFRSF1A-212ENST00000539372 TCF20Q9UGU0 1960 aaKnown RBP21.45■■□□□ 1.02
TNFRSF1A-212ENST00000539372 DDX11L8A8MPP1 907 aa21.44■■□□□ 1.02
TNFRSF1A-212ENST00000539372 GRM6O15303 877 aa21.44■■□□□ 1.02
TNFRSF1A-212ENST00000539372 STBD1O95210 358 aa21.44■■□□□ 1.02
TNFRSF1A-212ENST00000539372 GCFC2P16383 781 aaKnown RBP21.44■■□□□ 1.02
TNFRSF1A-212ENST00000539372 NR5A1Q13285 461 aa21.44■■□□□ 1.02
TNFRSF1A-212ENST00000539372 TARBP2Q15633 366 aaKnown RBP21.44■■□□□ 1.02
TNFRSF1A-212ENST00000539372 XKR3Q5GH77 459 aa21.44■■□□□ 1.02
TNFRSF1A-212ENST00000539372 PPP4R3AQ6IN85 833 aa21.44■■□□□ 1.02
TNFRSF1A-212ENST00000539372 SCLT1Q96NL6 688 aa21.44■■□□□ 1.02
TNFRSF1A-212ENST00000539372 NIFKQ9BYG3 293 aaKnown RBP21.44■■□□□ 1.02
TNFRSF1A-212ENST00000539372 UBE2ZQ9H832 354 aaPredicted RBP21.44■■□□□ 1.02
TNFRSF1A-212ENST00000539372 RGS18Q9NS28 235 aa21.44■■□□□ 1.02
TNFRSF1A-212ENST00000539372 C1orf112Q9NSG2 853 aa21.44■■□□□ 1.02
TNFRSF1A-212ENST00000539372 VAV3Q9UKW4 847 aa21.44■■□□□ 1.02
TNFRSF1A-212ENST00000539372 PPP2R5CQ13362 524 aa21.43■■□□□ 1.02
TNFRSF1A-212ENST00000539372 DRP2Q13474 957 aa21.43■■□□□ 1.02
TNFRSF1A-212ENST00000539372 TCEAL5Q5H9L2 206 aa21.43■■□□□ 1.02
TNFRSF1A-212ENST00000539372 SLC24A5Q71RS6 500 aa21.43■■□□□ 1.02
TNFRSF1A-212ENST00000539372 POTEDQ86YR6 584 aa21.43■■□□□ 1.02
TNFRSF1A-212ENST00000539372 FAM20AQ96MK3 541 aa21.43■■□□□ 1.02
TNFRSF1A-212ENST00000539372 MUC3AQ02505 3323 aa21.43■■□□□ 1.02
TNFRSF1A-212ENST00000539372 C9IYK1 514 aa21.42■■□□□ 1.02
TNFRSF1A-212ENST00000539372 MARCH6O60337 910 aa21.42■■□□□ 1.02
TNFRSF1A-212ENST00000539372 KCNA5P22460 613 aa21.42■■□□□ 1.02
TNFRSF1A-212ENST00000539372 GPC3P51654 580 aa21.42■■□□□ 1.02
TNFRSF1A-212ENST00000539372 PSMC5P62195 406 aa21.42■■□□□ 1.02
TNFRSF1A-212ENST00000539372 ST3GAL1Q11201 340 aa21.42■■□□□ 1.02
TNFRSF1A-212ENST00000539372 FAM102BQ5T8I3 360 aa21.42■■□□□ 1.02
TNFRSF1A-212ENST00000539372 HAS1Q92839 578 aa21.42■■□□□ 1.02
TNFRSF1A-212ENST00000539372 TNFRSF25Q93038 417 aa21.42■■□□□ 1.02
TNFRSF1A-212ENST00000539372 CEP89Q96ST8 783 aa21.42■■□□□ 1.02
TNFRSF1A-212ENST00000539372 NSUN3Q9H649 340 aaKnown RBP21.42■■□□□ 1.02
TNFRSF1A-212ENST00000539372 BRMS1Q9HCU9 246 aa21.42■■□□□ 1.02
TNFRSF1A-212ENST00000539372 ALG13Q9NP73 1137 aaKnown RBP21.42■■□□□ 1.02
TNFRSF1A-212ENST00000539372 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF1A-212ENST00000539372 TBKBP1A7MCY6 615 aa21.41■■□□□ 1.02
TNFRSF1A-212ENST00000539372 FGFR4P22455 802 aa21.41■■□□□ 1.02
TNFRSF1A-212ENST00000539372 EIF4BP23588 611 aaKnown RBP21.41■■□□□ 1.02
TNFRSF1A-212ENST00000539372 DSC3Q14574 896 aa21.41■■□□□ 1.02
TNFRSF1A-212ENST00000539372 PLA2G4FQ68DD2 849 aa21.41■■□□□ 1.02
TNFRSF1A-212ENST00000539372 ANO5Q75V66 913 aa21.41■■□□□ 1.02
TNFRSF1A-212ENST00000539372 NLRP7Q8WX94 980 aa21.41■■□□□ 1.02
TNFRSF1A-212ENST00000539372 NAP1L4Q99733 375 aaKnown RBP21.41■■□□□ 1.02
TNFRSF1A-212ENST00000539372 PLVAPQ9BX97 442 aa21.41■■□□□ 1.02
TNFRSF1A-212ENST00000539372 FGFR1P11362 822 aa21.4■■□□□ 1.02
TNFRSF1A-212ENST00000539372 DARSP14868 501 aaKnown RBP21.4■■□□□ 1.02
TNFRSF1A-212ENST00000539372 EP400NLQ6ZTU2 488 aa21.4■■□□□ 1.02
TNFRSF1A-212ENST00000539372 LMAN2LQ9H0V9 348 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms