RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 DDX25Q9UHL0 483 aaKnown RBP25.04■■□□□ 1.6
SCARB1-206ENST00000539320 CCDC194A0A1B0GVG4 234 aa25.03■■□□□ 1.6
SCARB1-206ENST00000539320 GPR182O15218 404 aa25.03■■□□□ 1.6
SCARB1-206ENST00000539320 MGEA5O60502 916 aa25.03■■□□□ 1.6
SCARB1-206ENST00000539320 SARSP49591 514 aaKnown RBP25.03■■□□□ 1.6
SCARB1-206ENST00000539320 FAM228AQ86W67 206 aa25.03■■□□□ 1.6
SCARB1-206ENST00000539320 LMAN2LQ9H0V9 348 aa25.03■■□□□ 1.6
SCARB1-206ENST00000539320 NSUN3Q9H649 340 aaKnown RBP25.03■■□□□ 1.6
SCARB1-206ENST00000539320 C1orf112Q9NSG2 853 aa25.03■■□□□ 1.6
SCARB1-206ENST00000539320 LRFN2Q9ULH4 789 aa25.03■■□□□ 1.6
SCARB1-206ENST00000539320 ST3GAL5Q9UNP4 418 aa25.03■■□□□ 1.6
SCARB1-206ENST00000539320 AKT3Q9Y243 479 aa25.03■■□□□ 1.6
SCARB1-206ENST00000539320 MRPL42Q9Y6G3 142 aaKnown RBP25.03■■□□□ 1.6
SCARB1-206ENST00000539320 DENND3A2RUS2 1198 aa25.02■■□□□ 1.6
SCARB1-206ENST00000539320 GPR32O75388 356 aa25.02■■□□□ 1.6
SCARB1-206ENST00000539320 IBSPP21815 317 aaPredicted RBP25.02■■□□□ 1.6
SCARB1-206ENST00000539320 TMOD1P28289 359 aa25.02■■□□□ 1.6
SCARB1-206ENST00000539320 LETM2Q2VYF4 491 aa25.02■■□□□ 1.6
SCARB1-206ENST00000539320 PAN2Q504Q3 1202 aaKnown RBP25.02■■□□□ 1.6
SCARB1-206ENST00000539320 B3GNT9Q6UX72 402 aa25.02■■□□□ 1.6
SCARB1-206ENST00000539320 LRRC71Q8N4P6 559 aa25.02■■□□□ 1.6
SCARB1-206ENST00000539320 PLVAPQ9BX97 442 aa25.02■■□□□ 1.6
SCARB1-206ENST00000539320 SLC37A4O43826 429 aa25.01■■□□□ 1.59
SCARB1-206ENST00000539320 EIF5BO60841 1220 aaKnown RBP25.01■■□□□ 1.59
SCARB1-206ENST00000539320 TCEAL5Q5H9L2 206 aa25.01■■□□□ 1.59
SCARB1-206ENST00000539320 EFCAB12Q6NXP0 572 aa25.01■■□□□ 1.59
SCARB1-206ENST00000539320 ADAM2Q99965 735 aa25.01■■□□□ 1.59
SCARB1-206ENST00000539320 ORC3Q9UBD5 711 aaPredicted RBP25.01■■□□□ 1.59
SCARB1-206ENST00000539320 BDP1A6H8Y1 2624 aa25■■□□□ 1.59
SCARB1-206ENST00000539320 KIAA1671Q9BY89 1806 aa25■■□□□ 1.59
SCARB1-206ENST00000539320 ATG2AQ2TAZ0 1938 aa25■■□□□ 1.59
SCARB1-206ENST00000539320 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25■■□□□ 1.59
SCARB1-206ENST00000539320 GRM6O15303 877 aa25■■□□□ 1.59
SCARB1-206ENST00000539320 CTDNEP1O95476 244 aa25■■□□□ 1.59
SCARB1-206ENST00000539320 KCNA5P22460 613 aa25■■□□□ 1.59
SCARB1-206ENST00000539320 GATMP50440 423 aa25■■□□□ 1.59
SCARB1-206ENST00000539320 TBC1D8BQ0IIM8 1120 aa25■■□□□ 1.59
SCARB1-206ENST00000539320 NEK8Q86SG6 692 aa25■■□□□ 1.59
SCARB1-206ENST00000539320 ZNF710Q8N1W2 664 aa25■■□□□ 1.59
SCARB1-206ENST00000539320 WASF1Q92558 559 aa25■■□□□ 1.59
SCARB1-206ENST00000539320 RGS18Q9NS28 235 aa25■■□□□ 1.59
SCARB1-206ENST00000539320 RNF216Q9NWF9 866 aaPredicted RBP25■■□□□ 1.59
SCARB1-206ENST00000539320 SEPT9Q9UHD8 586 aaPredicted RBP25■■□□□ 1.59
SCARB1-206ENST00000539320 DTNBO60941 627 aa24.99■■□□□ 1.59
SCARB1-206ENST00000539320 GCFC2P16383 781 aaKnown RBP24.99■■□□□ 1.59
SCARB1-206ENST00000539320 NLRP11P59045 1033 aaKnown RBP24.99■■□□□ 1.59
SCARB1-206ENST00000539320 LEXMQ3ZCV2 418 aa24.99■■□□□ 1.59
SCARB1-206ENST00000539320 XKR3Q5GH77 459 aa24.99■■□□□ 1.59
SCARB1-206ENST00000539320 SLC24A5Q71RS6 500 aa24.99■■□□□ 1.59
SCARB1-206ENST00000539320 ADAMTS10Q9H324 1103 aa24.99■■□□□ 1.59
SCARB1-206ENST00000539320 GJB4Q9NTQ9 266 aa24.99■■□□□ 1.59
SCARB1-206ENST00000539320 PCDHB7Q9Y5E2 793 aa24.99■■□□□ 1.59
SCARB1-206ENST00000539320 C9IYK1 514 aa24.98■■□□□ 1.59
SCARB1-206ENST00000539320 LARGE1O95461 756 aa24.98■■□□□ 1.59
SCARB1-206ENST00000539320 MMP1P03956 469 aa24.98■■□□□ 1.59
SCARB1-206ENST00000539320 TARBP2Q15633 366 aaKnown RBP24.98■■□□□ 1.59
SCARB1-206ENST00000539320 PIK3AP1Q6ZUJ8 805 aa24.98■■□□□ 1.59
SCARB1-206ENST00000539320 OXER1Q8TDS5 423 aa24.98■■□□□ 1.59
SCARB1-206ENST00000539320 P2RX5Q93086 422 aa24.98■■□□□ 1.59
SCARB1-206ENST00000539320 GTF3C6Q969F1 213 aa24.98■■□□□ 1.59
SCARB1-206ENST00000539320 SCLT1Q96NL6 688 aa24.98■■□□□ 1.59
SCARB1-206ENST00000539320 KCNMB3Q9NPA1 279 aa24.98■■□□□ 1.59
SCARB1-206ENST00000539320 GPC3P51654 580 aa24.97■■□□□ 1.59
SCARB1-206ENST00000539320 DSC3Q14574 896 aa24.97■■□□□ 1.59
SCARB1-206ENST00000539320 ME3Q16798 604 aa24.97■■□□□ 1.59
SCARB1-206ENST00000539320 MTERF2Q49AM1 385 aa24.97■■□□□ 1.59
SCARB1-206ENST00000539320 NAALADL2Q58DX5 795 aa24.97■■□□□ 1.59
SCARB1-206ENST00000539320 PPP4R3AQ6IN85 833 aa24.97■■□□□ 1.59
SCARB1-206ENST00000539320 NECAB1Q8N987 351 aa24.97■■□□□ 1.59
SCARB1-206ENST00000539320 NAP1L4Q99733 375 aaKnown RBP24.97■■□□□ 1.59
SCARB1-206ENST00000539320 COL19A1Q14993 1142 aa24.96■■□□□ 1.59
SCARB1-206ENST00000539320 PABPC5Q96DU9 382 aaKnown RBP24.96■■□□□ 1.59
SCARB1-206ENST00000539320 ZNF668Q96K58 619 aaPredicted RBP24.96■■□□□ 1.59
SCARB1-206ENST00000539320 FAM20AQ96MK3 541 aa24.96■■□□□ 1.59
SCARB1-206ENST00000539320 NIFKQ9BYG3 293 aaKnown RBP24.96■■□□□ 1.59
SCARB1-206ENST00000539320 VAV3Q9UKW4 847 aa24.96■■□□□ 1.59
SCARB1-206ENST00000539320 FNDC1Q4ZHG4 1894 aaPredicted RBP24.96■■□□□ 1.59
SCARB1-206ENST00000539320 TMEM150BA6NC51 233 aa24.95■■□□□ 1.58
SCARB1-206ENST00000539320 CSPG5O95196 566 aa24.95■■□□□ 1.58
SCARB1-206ENST00000539320 STBD1O95210 358 aa24.95■■□□□ 1.58
SCARB1-206ENST00000539320 CENPBP07199 599 aaPredicted RBP24.95■■□□□ 1.58
SCARB1-206ENST00000539320 EIF4BP23588 611 aaKnown RBP24.95■■□□□ 1.58
SCARB1-206ENST00000539320 PSMC5P62195 406 aa24.95■■□□□ 1.58
SCARB1-206ENST00000539320 PPP2R5CQ13362 524 aa24.95■■□□□ 1.58
SCARB1-206ENST00000539320 ATP6V0A4Q9HBG4 840 aa24.95■■□□□ 1.58
SCARB1-206ENST00000539320 BRMS1Q9HCU9 246 aa24.95■■□□□ 1.58
SCARB1-206ENST00000539320 ALG13Q9NP73 1137 aaKnown RBP24.95■■□□□ 1.58
SCARB1-206ENST00000539320 TMEM161AQ9NX61 479 aa24.95■■□□□ 1.58
SCARB1-206ENST00000539320 PLAGL2Q9UPG8 496 aa24.95■■□□□ 1.58
SCARB1-206ENST00000539320 TBKBP1A7MCY6 615 aa24.94■■□□□ 1.58
SCARB1-206ENST00000539320 EML1O00423 815 aa24.94■■□□□ 1.58
SCARB1-206ENST00000539320 CCNT1O60563 726 aaKnown RBP24.94■■□□□ 1.58
SCARB1-206ENST00000539320 ITGB1P05556 798 aa24.94■■□□□ 1.58
SCARB1-206ENST00000539320 FDPSP14324 419 aaKnown RBP24.94■■□□□ 1.58
SCARB1-206ENST00000539320 DARSP14868 501 aaKnown RBP24.94■■□□□ 1.58
SCARB1-206ENST00000539320 KRT2P35908 639 aa24.94■■□□□ 1.58
SCARB1-206ENST00000539320 NSUN7Q8NE18 718 aaKnown RBP24.94■■□□□ 1.58
SCARB1-206ENST00000539320 NEK9Q8TD19 979 aa24.94■■□□□ 1.58
SCARB1-206ENST00000539320 NLRP7Q8WX94 980 aa24.94■■□□□ 1.58
SCARB1-206ENST00000539320 CEP89Q96ST8 783 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms