RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 KLRC1P26715 233 aa15.92■□□□□ 0.14
CDCA3-207ENST00000538862 MATR3P43243 847 aaKnown RBP eCLIP15.92■□□□□ 0.14
CDCA3-207ENST00000538862 IRX5P78411 483 aaPredicted RBP15.92■□□□□ 0.14
CDCA3-207ENST00000538862 CACNB1Q02641 598 aaPredicted RBP15.92■□□□□ 0.14
CDCA3-207ENST00000538862 KNOP1Q1ED39 458 aaKnown RBP15.92■□□□□ 0.14
CDCA3-207ENST00000538862 ALS2CLQ60I27 953 aa15.92■□□□□ 0.14
CDCA3-207ENST00000538862 LRRC31Q6UY01 552 aa15.92■□□□□ 0.14
CDCA3-207ENST00000538862 EPM2AIP1Q7L775 607 aaPredicted RBP15.92■□□□□ 0.14
CDCA3-207ENST00000538862 ZKSCAN4Q969J2 545 aaPredicted RBP15.92■□□□□ 0.14
CDCA3-207ENST00000538862 WNK4Q96J92 1243 aa15.92■□□□□ 0.14
CDCA3-207ENST00000538862 PSMB7Q99436 277 aa15.92■□□□□ 0.14
CDCA3-207ENST00000538862 RBM12Q9NTZ6 932 aaKnown RBP15.92■□□□□ 0.14
CDCA3-207ENST00000538862 SIPA1L1O43166 1804 aa15.92■□□□□ 0.14
CDCA3-207ENST00000538862 POTEFA5A3E0 1075 aa15.92■□□□□ 0.14
CDCA3-207ENST00000538862 CALUO43852 315 aaPredicted RBP15.92■□□□□ 0.14
CDCA3-207ENST00000538862 OPA1O60313 960 aa15.92■□□□□ 0.14
CDCA3-207ENST00000538862 TRPA1O75762 1119 aa15.92■□□□□ 0.14
CDCA3-207ENST00000538862 SREBF1P36956 1147 aa15.92■□□□□ 0.14
CDCA3-207ENST00000538862 STAT3P40763 770 aa15.92■□□□□ 0.14
CDCA3-207ENST00000538862 MEI1Q5TIA1 1274 aa15.92■□□□□ 0.14
CDCA3-207ENST00000538862 TATDN1Q6P1N9 297 aa15.92■□□□□ 0.14
CDCA3-207ENST00000538862 POTEGQ6S5H5 508 aa15.92■□□□□ 0.14
CDCA3-207ENST00000538862 POTEEQ6S8J3 1075 aa15.92■□□□□ 0.14
CDCA3-207ENST00000538862 GPIHBP1Q8IV16 184 aa15.92■□□□□ 0.14
CDCA3-207ENST00000538862 IFT20Q8IY31 132 aa15.92■□□□□ 0.14
CDCA3-207ENST00000538862 GMCL1P1Q8NEA9 526 aa15.92■□□□□ 0.14
CDCA3-207ENST00000538862 FAM76AQ8TAV0 307 aa15.92■□□□□ 0.14
CDCA3-207ENST00000538862 RIN2Q8WYP3 895 aaPredicted RBP15.92■□□□□ 0.14
CDCA3-207ENST00000538862 SH3GL2Q99962 352 aa15.92■□□□□ 0.14
CDCA3-207ENST00000538862 ARMCX3Q9UH62 379 aaPredicted RBP15.92■□□□□ 0.14
CDCA3-207ENST00000538862 A0A087X0T9 212 aa15.91■□□□□ 0.14
CDCA3-207ENST00000538862 GOLGA8KD6RF30 607 aa15.91■□□□□ 0.14
CDCA3-207ENST00000538862 CES2O00748 559 aa15.91■□□□□ 0.14
CDCA3-207ENST00000538862 ENTPD3O75355 529 aa15.91■□□□□ 0.14
CDCA3-207ENST00000538862 AFPP02771 609 aaKnown RBP15.91■□□□□ 0.14
CDCA3-207ENST00000538862 FAM228BP0C875 321 aa15.91■□□□□ 0.14
CDCA3-207ENST00000538862 SPATA31C1P0DKV0 1188 aa15.91■□□□□ 0.14
CDCA3-207ENST00000538862 ANXA13P27216 316 aa15.91■□□□□ 0.14
CDCA3-207ENST00000538862 CIITAP33076 1130 aa15.91■□□□□ 0.14
CDCA3-207ENST00000538862 SLC7A5Q01650 507 aa15.91■□□□□ 0.14
CDCA3-207ENST00000538862 BMT2Q1RMZ1 405 aa15.91■□□□□ 0.14
CDCA3-207ENST00000538862 KIAA0753Q2KHM9 967 aa15.91■□□□□ 0.14
CDCA3-207ENST00000538862 PRR16Q569H4 304 aa15.91■□□□□ 0.14
CDCA3-207ENST00000538862 DPY19L2P1Q6NXN4 242 aa15.91■□□□□ 0.14
CDCA3-207ENST00000538862 TMEM179Q6ZVK1 233 aa15.91■□□□□ 0.14
CDCA3-207ENST00000538862 FAM133AQ8N9E0 248 aa15.91■□□□□ 0.14
CDCA3-207ENST00000538862 LENG9Q96B70 501 aa15.91■□□□□ 0.14
CDCA3-207ENST00000538862 GMCL1Q96IK5 515 aa15.91■□□□□ 0.14
CDCA3-207ENST00000538862 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.91■□□□□ 0.14
CDCA3-207ENST00000538862 GDF3Q9NR23 364 aa15.91■□□□□ 0.14
CDCA3-207ENST00000538862 RNF186Q9NXI6 227 aa15.91■□□□□ 0.14
CDCA3-207ENST00000538862 ADAMTS1Q9UHI8 967 aa15.91■□□□□ 0.14
CDCA3-207ENST00000538862 GOLGA6CA6NDK9 693 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 SPDYE3A6NKU9 549 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 SHOX2O60902 331 aaPredicted RBP15.9■□□□□ 0.14
CDCA3-207ENST00000538862 GOLGA6DP0CG33 693 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 EPB41P11171 864 aaKnown RBP15.9■□□□□ 0.14
CDCA3-207ENST00000538862 INPP5BP32019 993 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 SLC20A2Q08357 652 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 DCAF15Q66K64 600 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 IRF2BP2Q7Z5L9 587 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 SRLQ86TD4 932 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 FBXO11Q86XK2 927 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 SIAH1Q8IUQ4 282 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 OPTNQ96CV9 577 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 ZHX3Q9H4I2 956 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 METTL14Q9HCE5 456 aaKnown RBP15.9■□□□□ 0.14
CDCA3-207ENST00000538862 GOLGA6AQ9NYA3 693 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 SMARCAL1Q9NZC9 954 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 EHD2Q9NZN4 543 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 FBXL5Q9UKA1 691 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 F5H6K3 240 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 RAD21O60216 631 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 RPL13P26373 211 aaKnown RBP15.9■□□□□ 0.14
CDCA3-207ENST00000538862 CASP5P51878 434 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 PSMC6P62333 389 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 ICA1Q05084 483 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 KLRC3Q07444 240 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 PPFIA1Q13136 1202 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 IFI16Q16666 785 aaKnown RBP15.9■□□□□ 0.14
CDCA3-207ENST00000538862 UIMC1Q96RL1 719 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 P2RX7Q99572 595 aaKnown RBP15.9■□□□□ 0.14
CDCA3-207ENST00000538862 REEP2Q9BRK0 252 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 POLR3CQ9BUI4 534 aaPredicted RBP15.9■□□□□ 0.14
CDCA3-207ENST00000538862 ZNF341Q9BYN7 854 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 CSADQ9Y600 493 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 ATP8B3O60423 1300 aa15.9■□□□□ 0.14
CDCA3-207ENST00000538862 ATRNL1Q5VV63 1379 aa15.89■□□□□ 0.14
CDCA3-207ENST00000538862 FAM196BA6NMK8 535 aa15.89■□□□□ 0.13
CDCA3-207ENST00000538862 SLC16A3O15427 465 aaKnown RBP15.89■□□□□ 0.13
CDCA3-207ENST00000538862 PPFIA4O75335 1185 aa15.89■□□□□ 0.13
CDCA3-207ENST00000538862 XRCC5P13010 732 aaKnown RBP15.89■□□□□ 0.13
CDCA3-207ENST00000538862 UCHL3P15374 230 aa15.89■□□□□ 0.13
CDCA3-207ENST00000538862 HOXD13P35453 343 aa15.89■□□□□ 0.13
CDCA3-207ENST00000538862 PRKCIP41743 596 aa15.89■□□□□ 0.13
CDCA3-207ENST00000538862 IRX3P78415 501 aaPredicted RBP15.89■□□□□ 0.13
CDCA3-207ENST00000538862 APBA1Q02410 837 aa15.89■□□□□ 0.13
CDCA3-207ENST00000538862 PABPC4Q13310 644 aaKnown RBP eCLIP15.89■□□□□ 0.132e-7■■■□□ 15.6
CDCA3-207ENST00000538862 EXOC3L4Q17RC7 722 aa15.89■□□□□ 0.13
CDCA3-207ENST00000538862 GBP6Q6ZN66 633 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms