RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 CYP26B1Q9NR63 512 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 TBC1D7Q9P0N9 293 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 KCNG1Q9UIX4 513 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 EMSYQ7Z589 1322 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 LOXHD1Q8IVV2 1947 aa11.82□□□□□ -0.52
TNFRSF1A-211ENST00000538363 TMEM150BA6NC51 233 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 CCDC169A6NNP5 214 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 SMTNL1A8MU46 457 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 LGR5O75473 907 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 DGAT1O75907 488 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 PGK1P00558 417 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 ZNF286BP0CG31 522 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 CCND3P30281 292 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 PPP1R2P41236 205 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 RARRES1P49788 294 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 LBX1P52954 281 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 SMTNP53814 917 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 KCNB1Q14721 858 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 ZNF658Q5TYW1 1059 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 RBM43Q6ZSC3 357 aaKnown RBP11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 RNF180Q86T96 592 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 TRIM50Q86XT4 487 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 MLKLQ8NB16 471 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 PCSK9Q8NBP7 692 aaKnown RBP11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 RETREG2Q8NC44 543 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 MCPH1Q8NEM0 835 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 TRPV1Q8NER1 839 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 ATP8B4Q8TF62 1192 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 LENG1Q96BZ8 264 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 MTRQ99707 1265 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 RUSC1Q9BVN2 902 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 DNAJC25Q9H1X3 360 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 MRPL44Q9H9J2 332 aaKnown RBP11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 SLC39A2Q9NP94 309 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 LARSQ9P2J5 1176 aaKnown RBP11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 WRAP73Q9P2S5 460 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 DDX20Q9UHI6 824 aaKnown RBP11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 TUBE1Q9UJT0 475 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 GNEQ9Y223 722 aaKnown RBP11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 PTPN22Q9Y2R2 807 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 TELO2Q9Y4R8 837 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 PPME1Q9Y570 386 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 IGSF9BQ9UPX0 1349 aa11.81□□□□□ -0.52
TNFRSF1A-211ENST00000538363 IGKV6D-21A0A0A0MT36 114 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 TTLL13PA6NNM8 815 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 SFI1A8K8P3 1242 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 ZNF862O60290 1169 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 HIP1RO75146 1068 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 PTGS1P23219 599 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 TMOD1P28289 359 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 ZNF165P49910 485 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 PLCB2Q00722 1185 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 COASYQ13057 564 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 GIT2Q14161 759 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 PLCB4Q15147 1175 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 ODR4Q5SWX8 454 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 C1orf186Q6ZWK4 172 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 ANO5Q75V66 913 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 CTU1Q7Z7A3 348 aaKnown RBP11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 CREBRFQ8IUR6 639 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 METTL13Q8N6R0 699 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 C7orf31Q8N865 590 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 ARRDC4Q8NCT1 418 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 RNF214Q8ND24 703 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 SH3TC2Q8TF17 1288 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 TCP11Q8WWU5 503 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 KIFAP3Q92845 792 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 REEP2Q9BRK0 252 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 NIFKQ9BYG3 293 aaKnown RBP11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 PARVGQ9HBI0 331 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 POLD4Q9HCU8 107 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 ODF2LQ9ULJ1 636 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 FRMPD3Q5JV73 1810 aa11.8□□□□□ -0.52
TNFRSF1A-211ENST00000538363 RRN3P2A6NIE6 340 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 A6NJR5 290 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 TULP1O00294 542 aaPredicted RBP11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 PSMA7O14818 248 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 MAGEB2O15479 319 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 GCNT3O95395 438 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 GNAT1P11488 350 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 GUCY2CP25092 1073 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 SARSP49591 514 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 PSEN2P49810 448 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 ATN1P54259 1190 aaPredicted RBP11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 GJA9P57773 515 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 PPFIA1Q13136 1202 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 DMP1Q13316 513 aaPredicted RBP11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 MORC3Q14149 939 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 MFSD10Q14728 455 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 EMC2Q15006 297 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 PPP2R5AQ15172 486 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 TMEM132AQ24JP5 1023 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 ARSHQ5FYA8 562 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 FAM47CQ5HY64 1035 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 FAM26FQ5R3K3 315 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 FAM178BQ8IXR5 827 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 SYCP3Q8IZU3 236 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 SCLT1Q96NL6 688 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 PCYT2Q99447 389 aa11.79□□□□□ -0.52
TNFRSF1A-211ENST00000538363 TSG101Q99816 390 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms