RNA–Protein interactions for RNA: ENST00000538271.1

PRKAB1-204, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 4

Gene PRKAB1, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-204ENST00000538271 Q6ZNB5 142 aa11.23□□□□□ -0.61
PRKAB1-204ENST00000538271 LCORLQ8N3X6 602 aa11.23□□□□□ -0.61
PRKAB1-204ENST00000538271 LRIG1Q96JA1 1093 aa11.23□□□□□ -0.61
PRKAB1-204ENST00000538271 TYW1Q9NV66 732 aaKnown RBP11.23□□□□□ -0.61
PRKAB1-204ENST00000538271 EPS15L1Q9UBC2 864 aa11.23□□□□□ -0.61
PRKAB1-204ENST00000538271 PTPRCP08575 1304 aa11.23□□□□□ -0.61
PRKAB1-204ENST00000538271 CFAP46Q8IYW2 2715 aa11.23□□□□□ -0.61
PRKAB1-204ENST00000538271 SPTAN1Q13813 2472 aaKnown RBP11.23□□□□□ -0.61
PRKAB1-204ENST00000538271 B4DLN1 442 aa11.22□□□□□ -0.61
PRKAB1-204ENST00000538271 J3QKU1 62 aa11.22□□□□□ -0.61
PRKAB1-204ENST00000538271 SRGAP3O43295 1099 aa11.22□□□□□ -0.61
PRKAB1-204ENST00000538271 ICAM1P05362 532 aa11.22□□□□□ -0.61
PRKAB1-204ENST00000538271 GBP2P32456 591 aaPredicted RBP11.22□□□□□ -0.61
PRKAB1-204ENST00000538271 MRPL12P52815 198 aaKnown RBP11.22□□□□□ -0.61
PRKAB1-204ENST00000538271 ATP8B2P98198 1209 aa11.22□□□□□ -0.61
PRKAB1-204ENST00000538271 MGAT3Q09327 533 aa11.22□□□□□ -0.61
PRKAB1-204ENST00000538271 SNW1Q13573 536 aaKnown RBP11.22□□□□□ -0.61
PRKAB1-204ENST00000538271 LAPTM4AQ15012 233 aa11.22□□□□□ -0.61
PRKAB1-204ENST00000538271 RNF207Q6ZRF8 634 aa11.22□□□□□ -0.61
PRKAB1-204ENST00000538271 CABP7Q86V35 215 aa11.22□□□□□ -0.61
PRKAB1-204ENST00000538271 LAPTM4BQ86VI4 370 aa11.22□□□□□ -0.61
PRKAB1-204ENST00000538271 CLDN23Q96B33 292 aa11.22□□□□□ -0.61
PRKAB1-204ENST00000538271 KLHL5Q96PQ7 755 aa11.22□□□□□ -0.61
PRKAB1-204ENST00000538271 C16orf70Q9BSU1 422 aa11.22□□□□□ -0.61
PRKAB1-204ENST00000538271 LTB4R2Q9NPC1 389 aa11.22□□□□□ -0.61
PRKAB1-204ENST00000538271 DDX41Q9UJV9 622 aaKnown RBP11.22□□□□□ -0.61
PRKAB1-204ENST00000538271 LRFN2Q9ULH4 789 aa11.22□□□□□ -0.61
PRKAB1-204ENST00000538271 KAT6AQ92794 2004 aa11.21□□□□□ -0.61
PRKAB1-204ENST00000538271 NRCAMQ92823 1304 aa11.21□□□□□ -0.61
PRKAB1-204ENST00000538271 IGKV6D-41A0A0C4DH26 115 aa11.21□□□□□ -0.61
PRKAB1-204ENST00000538271 TBKBP1A7MCY6 615 aa11.21□□□□□ -0.61
PRKAB1-204ENST00000538271 PRKAB2O43741 272 aa11.21□□□□□ -0.61
PRKAB1-204ENST00000538271 PLA2G6O60733 806 aa11.21□□□□□ -0.61
PRKAB1-204ENST00000538271 ZNF806P0C7X5 589 aa11.21□□□□□ -0.61
PRKAB1-204ENST00000538271 SCG2P13521 617 aa11.21□□□□□ -0.61
PRKAB1-204ENST00000538271 LAG3P18627 525 aa11.21□□□□□ -0.61
PRKAB1-204ENST00000538271 RPS6P62753 249 aaKnown RBP11.21□□□□□ -0.61
PRKAB1-204ENST00000538271 FBXO47Q5MNV8 452 aa11.21□□□□□ -0.61
PRKAB1-204ENST00000538271 TSHZ1Q6ZSZ6 1077 aa11.21□□□□□ -0.61
PRKAB1-204ENST00000538271 AMOTL1Q8IY63 956 aa11.21□□□□□ -0.61
PRKAB1-204ENST00000538271 HNRNPLLQ8WVV9 542 aaKnown RBP11.21□□□□□ -0.61
PRKAB1-204ENST00000538271 MYADMQ96S97 322 aa11.21□□□□□ -0.61
PRKAB1-204ENST00000538271 CWH43Q9H720 699 aa11.21□□□□□ -0.61
PRKAB1-204ENST00000538271 SFXN1Q9H9B4 322 aa11.21□□□□□ -0.61
PRKAB1-204ENST00000538271 AGO3Q9H9G7 860 aaKnown RBP11.21□□□□□ -0.61
PRKAB1-204ENST00000538271 ATP8A2Q9NTI2 1148 aa11.21□□□□□ -0.61
PRKAB1-204ENST00000538271 PRR12Q9ULL5 1215 aa11.21□□□□□ -0.61
PRKAB1-204ENST00000538271 SYNPO2Q9UMS6 1093 aa11.21□□□□□ -0.61
PRKAB1-204ENST00000538271 MYH15Q9Y2K3 1946 aa11.21□□□□□ -0.62
PRKAB1-204ENST00000538271 APC2O95996 2303 aa11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 ABCA12Q86UK0 2595 aa11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 HYAL3O43820 417 aaPredicted RBP11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 RASA1P20936 1047 aa11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 RPS9P46781 194 aaKnown RBP11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 KRT17Q04695 432 aa11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 PRKCQQ04759 706 aa11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 MTAPQ13126 283 aa11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 MLF2Q15773 248 aaPredicted RBP11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 TNNI3KQ59H18 835 aa11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 ZBTB41Q5SVQ8 909 aa11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 SWT1Q5T5J6 900 aaKnown RBP11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 KIAA1211LQ6NV74 962 aa11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 SLC22A17Q8WUG5 538 aa11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 SPIRE2Q8WWL2 714 aa11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 CLEC4DQ8WXI8 215 aa11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 GLG1Q92896 1179 aa11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 FTHL17Q9BXU8 183 aa11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 CCDC8Q9H0W5 538 aaPredicted RBP11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 SETD4Q9NVD3 440 aa11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 KLK13Q9UKR3 277 aa11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 HDAC5Q9UQL6 1122 aa11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 FPGT-TNNI3KV9GXZ4 949 aa11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 SPAG17Q6Q759 2223 aa11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 LAMA1P25391 3075 aa11.2□□□□□ -0.62
PRKAB1-204ENST00000538271 H3BRB1 525 aa11.19□□□□□ -0.62
PRKAB1-204ENST00000538271 GNAT1P11488 350 aa11.19□□□□□ -0.62
PRKAB1-204ENST00000538271 CD72P21854 359 aa11.19□□□□□ -0.62
PRKAB1-204ENST00000538271 CD52P31358 61 aa11.19□□□□□ -0.62
PRKAB1-204ENST00000538271 CA8P35219 290 aa11.19□□□□□ -0.62
PRKAB1-204ENST00000538271 GPC5P78333 572 aa11.19□□□□□ -0.62
PRKAB1-204ENST00000538271 SRSF5Q13243 272 aaKnown RBP11.19□□□□□ -0.62
PRKAB1-204ENST00000538271 G3BP1Q13283 466 aaKnown RBP eCLIP11.19□□□□□ -0.62
PRKAB1-204ENST00000538271 HSDL1Q3SXM5 330 aa11.19□□□□□ -0.62
PRKAB1-204ENST00000538271 SH3PXD2AQ5TCZ1 1133 aa11.19□□□□□ -0.62
PRKAB1-204ENST00000538271 RNF43Q68DV7 783 aa11.19□□□□□ -0.62
PRKAB1-204ENST00000538271 FAM160A2Q8N612 972 aaPredicted RBP11.19□□□□□ -0.62
PRKAB1-204ENST00000538271 CHMP4CQ96CF2 233 aa11.19□□□□□ -0.62
PRKAB1-204ENST00000538271 CEP95Q96GE4 821 aa11.19□□□□□ -0.62
PRKAB1-204ENST00000538271 ZFRQ96KR1 1074 aaKnown RBP11.19□□□□□ -0.62
PRKAB1-204ENST00000538271 USP26Q9BXU7 913 aa11.19□□□□□ -0.62
PRKAB1-204ENST00000538271 TUT1Q9H6E5 874 aaKnown RBP11.19□□□□□ -0.62
PRKAB1-204ENST00000538271 BCAS3Q9H6U6 928 aa11.19□□□□□ -0.62
PRKAB1-204ENST00000538271 ARMT1Q9H993 441 aa11.19□□□□□ -0.62
PRKAB1-204ENST00000538271 SUPT16HQ9Y5B9 1047 aaKnown RBP11.19□□□□□ -0.62
PRKAB1-204ENST00000538271 ANHXE9PGG2 379 aa11.18□□□□□ -0.62
PRKAB1-204ENST00000538271 PDE6AP16499 860 aa11.18□□□□□ -0.62
PRKAB1-204ENST00000538271 IBSPP21815 317 aaPredicted RBP11.18□□□□□ -0.62
PRKAB1-204ENST00000538271 TARSP26639 723 aaKnown RBP11.18□□□□□ -0.62
PRKAB1-204ENST00000538271 SLC1A4P43007 532 aa11.18□□□□□ -0.62
PRKAB1-204ENST00000538271 ADAM17P78536 824 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms