RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 CHGBP05060 677 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 CSF1RP07333 972 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 SPDYE6P0CI01 402 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 KRT10P13645 584 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 CACNB2Q08289 660 aaPredicted RBP5.78□□□□□ -1.48
LRP6-203ENST00000538239 RPS6KA2Q15349 733 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 ALX1Q15699 326 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 ELF2Q15723 593 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 RABL6Q3YEC7 729 aaPredicted RBP5.78□□□□□ -1.48
LRP6-203ENST00000538239 ERO1AQ96HE7 468 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 RILPQ96NA2 401 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 CLGNO14967 610 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 CTNND1O60716 968 aaKnown RBP5.78□□□□□ -1.48
LRP6-203ENST00000538239 HIP1RO75146 1068 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 CCNE1P24864 410 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 PSMA2P25787 234 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 CEP85LQ5SZL2 805 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 ZNF449Q6P9G9 518 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 AFAP1L1Q8TED9 768 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 PPP4R1Q8TF05 950 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 MRPL47Q9HD33 250 aaKnown RBP5.78□□□□□ -1.48
LRP6-203ENST00000538239 PCDHA10Q9Y5I2 948 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 STK36Q9NRP7 1315 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 GARSP41250 739 aaKnown RBP5.78□□□□□ -1.48
LRP6-203ENST00000538239 MTMR3Q13615 1198 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 GLYCTKQ8IVS8 523 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 TMEM143Q96AN5 459 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 CHMP6Q96FZ7 201 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 ANGPTL3Q9Y5C1 460 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 MEGF6O75095 1541 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 POLR1AO95602 1720 aaPredicted RBP5.78□□□□□ -1.48
LRP6-203ENST00000538239 MOCS3O95396 460 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 PSMD6Q15008 389 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 TKFCQ3LXA3 575 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 RESP18Q5W5W9 173 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 C16orf86Q6ZW13 317 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 UNC13DQ70J99 1090 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 VCPKMTQ9H867 229 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 PRR12Q9ULL5 1215 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 TRIM49BA6NDI0 452 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 M0QYV0 167 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 NR3C1P04150 777 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 TUBBP07437 444 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 HS1BP3Q53T59 392 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 MYLK4Q86YV6 388 aaPredicted RBP5.78□□□□□ -1.48
LRP6-203ENST00000538239 SCYL3Q8IZE3 742 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 ALKBH8Q96BT7 664 aaKnown RBP5.78□□□□□ -1.48
LRP6-203ENST00000538239 AGBL1Q96MI9 1066 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 MAP3K20Q9NYL2 800 aaKnown RBP5.78□□□□□ -1.48
LRP6-203ENST00000538239 TACC3Q9Y6A5 838 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 MST1RQ04912 1400 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 MROH2AA6NES4 1674 aa5.77□□□□□ -1.48
LRP6-203ENST00000538239 ENC1O14682 589 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 GUCY1A2P33402 732 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 ZNF543Q08ER8 600 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 TMEM270Q6UE05 265 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 FBXO33Q7Z6M2 555 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 SDCCAG8Q86SQ7 713 aaPredicted RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 NEK9Q8TD19 979 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 PDCD6IPQ8WUM4 868 aaKnown RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 CFAP36Q96G28 342 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 PRMT6Q96LA8 375 aaPredicted RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 MTIF3Q9H2K0 278 aaKnown RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 NGRNQ9NPE2 291 aaKnown RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 PHLPP2Q6ZVD8 1323 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 KIF28PB7ZC32 967 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 ZWINTO95229 277 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 CTNNA1P35221 906 aaKnown RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 TRIP13Q15645 432 aaPredicted RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 KRT71Q3SY84 523 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 ACCSLQ4AC99 568 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 TCP11X2Q5H9J9 407 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 RPUSD2Q8IZ73 545 aaKnown RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 MCUQ8NE86 351 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 SUDS3Q9H7L9 328 aaPredicted RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 RGL1Q9NZL6 768 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 CALCOCO1Q9P1Z2 691 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 LRRD1A4D1F6 860 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 CCDC160A6NGH7 325 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 TADA2AO75478 443 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 PRKCBP05771 671 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 GRIK1P39086 918 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 BASP1P80723 227 aaKnown RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 NME3Q13232 169 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 THOC5Q13769 683 aaKnown RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 SGO2Q562F6 1265 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 PPP4R3CPQ6ZMV5 832 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 GTF3C2Q8WUA4 911 aaPredicted RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 HDAC11Q96DB2 347 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 ATG4CQ96DT6 458 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 ACAP3Q96P50 834 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 GBA2Q9HCG7 927 aaPredicted RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 KIF20BQ96Q89 1820 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 PFASO15067 1338 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 PASKQ96RG2 1323 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 POC1B-GALNT4F8VUJ3 575 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 RGS16O15492 202 aaPredicted RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 CREB3O43889 395 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 SLC25A27O95847 323 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 FTCDO95954 541 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms