RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 CWC25Q9NXE8 425 aaPredicted RBP11.56□□□□□ -0.56
RTN3-208ENST00000537981 PRR12Q9ULL5 1215 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 C1orf167Q5SNV9 1468 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 USP31Q70CQ4 1352 aa11.56□□□□□ -0.56
RTN3-208ENST00000537981 TMEM221A6NGB7 291 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 TLR2O60603 784 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 WFS1O76024 890 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 CBX6O95503 412 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 BAG3O95817 575 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 DESP17661 470 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 CCDC15Q0P6D6 951 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 KCNMA1Q12791 1236 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 TTLL12Q14166 644 aaPredicted RBP11.55□□□□□ -0.56
RTN3-208ENST00000537981 MPP2Q14168 576 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 C9orf131Q5VYM1 1079 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 ANKRD42Q8N9B4 389 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 RBBP8NLQ8NC74 664 aaPredicted RBP11.55□□□□□ -0.56
RTN3-208ENST00000537981 GATA6Q92908 595 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 TXLNGYQ9BZA5 131 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 PUS3Q9BZE2 481 aaKnown RBP11.55□□□□□ -0.56
RTN3-208ENST00000537981 KIAA1683Q9H0B3 1180 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 TUBGCP4Q9UGJ1 667 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 SIK3Q9Y2K2 1263 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 NOC2LQ9Y3T9 749 aaKnown RBP11.55□□□□□ -0.56
RTN3-208ENST00000537981 KAT6BQ8WYB5 2073 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 OR6B1O95007 311 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 ADAMTS2O95450 1211 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 GJB6O95452 261 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 FCER1AP12319 257 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 CDK17Q00537 523 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 SFSWAPQ12872 951 aaKnown RBP11.55□□□□□ -0.56
RTN3-208ENST00000537981 SDE2Q6IQ49 451 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 LMBR1LQ6UX01 489 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 NOP9Q86U38 636 aaKnown RBP11.55□□□□□ -0.56
RTN3-208ENST00000537981 BAP1Q92560 729 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 IFT74Q96LB3 600 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 GBP5Q96PP8 586 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 PHF12Q96QT6 1004 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 TIPINQ9BVW5 301 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 TBC1D10AQ9BXI6 508 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 PRKAG3Q9UGI9 489 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 ROBO1Q9Y6N7 1651 aa11.55□□□□□ -0.56
RTN3-208ENST00000537981 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.54□□□□□ -0.56
RTN3-208ENST00000537981 BOLA2-SMG1P6H3BVE0 249 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 KLRC4O43908 158 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 KRT36O76013 467 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 SUN1O94901 812 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 FGFR4P22455 802 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 VARSP26640 1264 aaKnown RBP11.54□□□□□ -0.56
RTN3-208ENST00000537981 PDE6CP51160 858 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 TSNAXIP1Q2TAA8 658 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 CEP128Q6ZU80 1094 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 CXorf38Q8TB03 319 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 DYDC2Q96IM9 177 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 SEMA4AQ9H3S1 761 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 KANSL2Q9H9L4 492 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 NLRP2Q9NX02 1062 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 ZSWIM5Q9P217 1185 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 CTNNAL1Q9UBT7 734 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 SLC12A7Q9Y666 1083 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 NUMBLQ9Y6R0 609 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 GOLGA6L10A0A0M3HER8 536 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 RGS16O15492 202 aaPredicted RBP11.54□□□□□ -0.56
RTN3-208ENST00000537981 PENKP01210 267 aaPredicted RBP11.54□□□□□ -0.56
RTN3-208ENST00000537981 HNRNPH3P31942 346 aaKnown RBP11.54□□□□□ -0.56
RTN3-208ENST00000537981 EVA1CP58658 441 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 LSAMPQ13449 338 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 TCEAL1Q15170 157 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 SNX30Q5VWJ9 437 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 DSTYKQ6XUX3 929 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 C3orf67Q6ZVT6 689 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 GET4Q7L5D6 327 aaPredicted RBP11.54□□□□□ -0.56
RTN3-208ENST00000537981 ENDOVQ8N8Q3 282 aaKnown RBP11.54□□□□□ -0.56
RTN3-208ENST00000537981 DHX38Q92620 1227 aaKnown RBP11.54□□□□□ -0.56
RTN3-208ENST00000537981 SLC7A6OSQ96CW6 309 aaPredicted RBP11.54□□□□□ -0.56
RTN3-208ENST00000537981 ERP27Q96DN0 273 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 CCDC87Q9NVE4 849 aa11.54□□□□□ -0.56
RTN3-208ENST00000537981 TDRKHQ9Y2W6 561 aaKnown RBP11.54□□□□□ -0.56
RTN3-208ENST00000537981 A0A087X0T9 212 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 A0A0J9YVX5 310 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 SPDYE16A6NNV3 312 aaPredicted RBP11.53□□□□□ -0.56
RTN3-208ENST00000537981 SMIM22K7EJ46 135 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 FAM228BP0C875 321 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 T-ENOLP0DO92 83 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 IFNAR1P17181 557 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 ZAP70P43403 619 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 PABPC4Q13310 644 aaKnown RBP eCLIP11.53□□□□□ -0.563e-7■■□□□ 12.6
RTN3-208ENST00000537981 MTMR3Q13615 1198 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 KIAA0753Q2KHM9 967 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 ISLR2Q6UXK2 745 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 XAGE3Q8WTP9 111 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 GLG1Q92896 1179 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 CCDC134Q9H6E4 229 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 ARHGEF38Q9NXL2 777 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 LRCH1Q9Y2L9 728 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 USP6P35125 1406 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 KRIT1O00522 736 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 ZBTB48P10074 688 aaPredicted RBP11.53□□□□□ -0.56
RTN3-208ENST00000537981 MCM7P33993 719 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 STK4Q13043 487 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms