RNA–Protein interactions for RNA: ENST00000537971.5

TSPAN9-206, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPAN9, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-206ENST00000537971 IFFO1Q0D2I5 559 aa13.44□□□□□ -0.26
TSPAN9-206ENST00000537971 STRN3Q13033 797 aa13.44□□□□□ -0.26
TSPAN9-206ENST00000537971 RAB30Q15771 203 aa13.44□□□□□ -0.26
TSPAN9-206ENST00000537971 SNX29Q8TEQ0 813 aa13.44□□□□□ -0.26
TSPAN9-206ENST00000537971 PURBQ96QR8 312 aaKnown RBP13.44□□□□□ -0.26
TSPAN9-206ENST00000537971 EMSYQ7Z589 1322 aa13.44□□□□□ -0.26
TSPAN9-206ENST00000537971 CTAGE15A4D2H0 777 aa13.44□□□□□ -0.26
TSPAN9-206ENST00000537971 RPS6KA5O75582 802 aa13.44□□□□□ -0.26
TSPAN9-206ENST00000537971 KIF20AO95235 890 aa13.44□□□□□ -0.26
TSPAN9-206ENST00000537971 CTAGE8P0CG41 777 aa13.44□□□□□ -0.26
TSPAN9-206ENST00000537971 ACTR2P61160 394 aa13.44□□□□□ -0.26
TSPAN9-206ENST00000537971 FANCCQ00597 558 aa13.44□□□□□ -0.26
TSPAN9-206ENST00000537971 ZNF484Q5JVG2 852 aa13.44□□□□□ -0.26
TSPAN9-206ENST00000537971 CTAGE6Q86UF2 777 aa13.44□□□□□ -0.26
TSPAN9-206ENST00000537971 CTAGE4Q8IX94 777 aa13.44□□□□□ -0.26
TSPAN9-206ENST00000537971 PPTC7Q8NI37 304 aa13.44□□□□□ -0.26
TSPAN9-206ENST00000537971 ALS2CR12Q96Q35 445 aa13.44□□□□□ -0.26
TSPAN9-206ENST00000537971 CTAGE1Q96RT6 745 aa13.44□□□□□ -0.26
TSPAN9-206ENST00000537971 RIT2Q99578 217 aa13.44□□□□□ -0.26
TSPAN9-206ENST00000537971 NFE2L3Q9Y4A8 694 aa13.44□□□□□ -0.26
TSPAN9-206ENST00000537971 OR52Z1P0C646 297 aa13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 UBA1P22314 1058 aaKnown RBP13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 RFX1P22670 979 aa13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 TRAPPC10P48553 1259 aa13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 PAK2Q13177 524 aa13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 ZNF746Q6NUN9 644 aaPredicted RBP13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 NEK9Q8TD19 979 aa13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 PDLIM2Q96JY6 352 aa13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 ZMYND12Q9H0C1 365 aa13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 GSTTP1A0A1W2PQM5 241 aa13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 ZNF710Q8N1W2 664 aa13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 RDM1Q8NG50 284 aa13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 RPS6KC1Q96S38 1066 aa13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 DDX41Q9UJV9 622 aaKnown RBP13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 LARGE1O95461 756 aa13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 HSD17B4P51659 736 aa13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 PSMC5P62195 406 aa13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 XKR3Q5GH77 459 aa13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 PAF1Q8N7H5 531 aa13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 CLEC4DQ8WXI8 215 aa13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 CCDC42Q96M95 316 aa13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 BAG1Q99933 345 aaPredicted RBP13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 PAK6Q9NQU5 681 aaPredicted RBP13.43□□□□□ -0.26
TSPAN9-206ENST00000537971 BTBD18B2RXH4 712 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 INO80B-WBP1J3KQ70 363 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 LGALS2P05162 132 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 CYP4A11Q02928 519 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 FAM114A1Q8IWE2 563 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 EEF2KMTQ96G04 330 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 PLCD4Q9BRC7 762 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 NT5C3AQ9H0P0 336 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 SELPP16109 830 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 CYLC1P35663 651 aaPredicted RBP13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 LONRF3Q496Y0 759 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 MYSM1Q5VVJ2 828 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 NFRKBQ6P4R8 1299 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 PSPC1Q8WXF1 523 aaKnown RBP13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 NACC1Q96RE7 527 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 PHF24Q9UPV7 400 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 H0YCG3 227 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 H0YGN5 161 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 PIK3CDO00329 1044 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 P4HBP07237 508 aaKnown RBP13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 PFKMP08237 780 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 MMP3P08254 477 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 ZNF865P0CJ78 1059 aaPredicted RBP13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 SREBF1P36956 1147 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 QARSP47897 775 aaKnown RBP13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 TWF2Q6IBS0 349 aaKnown RBP13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 DYDC1Q8WWB3 177 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 PPM1EQ8WY54 764 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 SETD4Q9NVD3 440 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 FAM170AA1A519 330 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 MAEAQ7L5Y9 396 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 NIPA1Q7RTP0 329 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 REPS2Q8NFH8 660 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 PPP1R16BQ96T49 567 aa13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 LUC7L2Q9Y383 392 aaKnown RBP13.42□□□□□ -0.26
TSPAN9-206ENST00000537971 NRCAMQ92823 1304 aa13.41□□□□□ -0.26
TSPAN9-206ENST00000537971 KDM3AQ9Y4C1 1321 aa13.41□□□□□ -0.26
TSPAN9-206ENST00000537971 LRRIQ4A6NIV6 560 aa13.41□□□□□ -0.26
TSPAN9-206ENST00000537971 FAM102BQ5T8I3 360 aa13.41□□□□□ -0.26
TSPAN9-206ENST00000537971 MAATS1Q7Z4T9 603 aa13.41□□□□□ -0.26
TSPAN9-206ENST00000537971 NOSTRINQ8IVI9 506 aa13.41□□□□□ -0.26
TSPAN9-206ENST00000537971 DIS3LQ8TF46 1054 aaKnown RBP13.41□□□□□ -0.26
TSPAN9-206ENST00000537971 NLRP4Q96MN2 994 aa13.41□□□□□ -0.26
TSPAN9-206ENST00000537971 TAF6LQ9Y6J9 622 aa13.41□□□□□ -0.26
TSPAN9-206ENST00000537971 HOXA2O43364 376 aa13.41□□□□□ -0.26
TSPAN9-206ENST00000537971 PHKA2P46019 1235 aa13.41□□□□□ -0.26
TSPAN9-206ENST00000537971 IGSF22Q8N9C0 903 aa13.41□□□□□ -0.26
TSPAN9-206ENST00000537971 URGCPQ8TCY9 931 aa13.41□□□□□ -0.26
TSPAN9-206ENST00000537971 FLRT1Q9NZU1 646 aa13.41□□□□□ -0.26
TSPAN9-206ENST00000537971 GPR182O15218 404 aa13.41□□□□□ -0.26
TSPAN9-206ENST00000537971 XPO4Q9C0E2 1151 aaKnown RBP13.41□□□□□ -0.26
TSPAN9-206ENST00000537971 FOXP1Q9H334 677 aaPredicted RBP13.41□□□□□ -0.26
TSPAN9-206ENST00000537971 CTAGE9A4FU28 777 aa13.4□□□□□ -0.26
TSPAN9-206ENST00000537971 PNOCQ13519 176 aa13.4□□□□□ -0.26
TSPAN9-206ENST00000537971 COL9A3Q14050 684 aaPredicted RBP13.4□□□□□ -0.26
TSPAN9-206ENST00000537971 PTPN21Q16825 1174 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms