RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 LTBP1Q14766 1721 aa3.12□□□□□ -1.91
TNFRSF1A-210ENST00000537842 SCN9AQ15858 1988 aa3.12□□□□□ -1.91
TNFRSF1A-210ENST00000537842 LAMB2P55268 1798 aa3.12□□□□□ -1.91
TNFRSF1A-210ENST00000537842 ARFGEF1Q9Y6D6 1849 aa3.12□□□□□ -1.91
TNFRSF1A-210ENST00000537842 SPTBN5Q9NRC6 3674 aaKnown RBP3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 DLEC1Q9Y238 1755 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 ANKRD18BA2A2Z9 1011 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 EYA2O00167 538 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 TRAF5O00463 557 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 CBFA2T2O43439 604 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 SIGLEC6O43699 453 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 SH3BP5O60239 455 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 CAND2O75155 1236 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 USP2O75604 605 aaPredicted RBP3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 MAP4K4O95819 1239 aaPredicted RBP3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 PRNPP04156 253 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 RNASE1P07998 156 aaKnown RBP3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 PDGFRBP09619 1106 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 VEGFAP15692 232 aaPredicted RBP3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 PTMSP20962 102 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 FUT4P22083 530 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 CNGA1P29973 690 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 CCNFP41002 786 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 GYG1P46976 350 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 GALK1P51570 392 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 PCBP3P57721 371 aaKnown RBP3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 ZNF280AP59817 542 aaPredicted RBP3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 ATP8B2P98198 1209 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 MTX1Q13505 466 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 RASGRF1Q13972 1273 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 BRD3Q15059 726 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 FXNQ16595 210 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 PLEKHG6Q3KR16 790 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 SV2CQ496J9 727 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 LONRF3Q496Y0 759 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 DACT2Q5SW24 774 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 PRAMEF18Q5VWM3 479 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 CST9Q5W186 159 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 ZKSCAN2Q63HK3 967 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 CEP85Q6P2H3 762 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 LDHAL6AQ6ZMR3 332 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 NFXL1Q6ZNB6 911 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 C15orf52Q6ZUT6 534 aaKnown RBP3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 TMPRSS7Q7RTY8 843 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 WFDC3Q8IUB2 231 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 FMNL3Q8IVF7 1028 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 GPC2Q8N158 579 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 C19orf47Q8N9M1 422 aaKnown RBP3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 SSH3Q8TE77 659 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 JDP2Q8WYK2 163 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 TCTN2Q96GX1 697 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 ZBED3Q96IU2 234 aaPredicted RBP3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 ALPK1Q96QP1 1244 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 CDC5LQ99459 802 aaKnown RBP3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 NAP1L4Q99733 375 aaKnown RBP3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 API5Q9BZZ5 524 aaKnown RBP3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 SIL1Q9H173 461 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 DUSP15Q9H1R2 295 aaPredicted RBP3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 GP6Q9HCN6 339 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 CD209Q9NNX6 404 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 HOMER2Q9NSB8 354 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 GPRC5DQ9NZD1 345 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 APEX2Q9UBZ4 518 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 PGAP2Q9UHJ9 254 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 CNOT7Q9UIV1 285 aaKnown RBP3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 ZNF214Q9UL59 606 aaPredicted RBP3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 G3BP2Q9UN86 482 aaKnown RBP3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 ZNF451Q9Y4E5 1061 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 SNX11Q9Y5W9 270 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 COMMD10Q9Y6G5 202 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 ZNF804BA4D1E1 1349 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 XDHP47989 1333 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 CCDC88AQ3V6T2 1871 aa3.11□□□□□ -1.91
TNFRSF1A-210ENST00000537842 ANKRD36CQ5JPF3 1778 aa3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 ALG1L2C9J202 215 aa3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 SHOXO15266 292 aa3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 IPO8O15397 1037 aaKnown RBP3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 PDPK1O15530 556 aa3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 SRGAP3O43295 1099 aa3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 CREB3O43889 395 aa3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 TOMM70O94826 608 aa3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 KCNH1O95259 989 aa3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 PDE8BO95263 885 aa3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 GJB6O95452 261 aa3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 ESR1P03372 595 aa3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 GNAI2P04899 355 aa3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 CHGBP05060 677 aa3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 KRT18P05783 430 aaKnown RBP3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 GSTM1P09488 218 aa3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 UBTFL1P0CB47 393 aaPredicted RBP3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 IL1R1P14778 569 aa3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 IFNGR1P15260 489 aa3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 CD247P20963 164 aa3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 EPHX2P34913 555 aa3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 TRHRP34981 398 aaPredicted RBP3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 IGHMBP2P38935 993 aaKnown RBP3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 PHKA1P46020 1223 aa3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 ZNF445P59923 1031 aa3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 ERVFC1P60507 584 aa3.1□□□□□ -1.91
TNFRSF1A-210ENST00000537842 TFCP2Q12800 502 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms