RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 KBTBD3Q8NAB2 608 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 ASZ1Q8WWH4 475 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 IL1RAPL1Q9NZN1 696 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 C15orf41Q9Y2V0 281 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 FHOD1Q9Y613 1164 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 CDK5RAP2Q96SN8 1893 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 UBE4BO95155 1302 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 ZDBF2Q9HCK1 2354 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 SYNJ2BP-COX16A0A087WUM0 186 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 ZNF185O15231 689 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 RHOBTB1O94844 696 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 IQCB1Q15051 598 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 LUZP2Q86TE4 346 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 NOA1Q8NC60 698 aaKnown RBP6.05□□□□□ -1.44
CSMD1-215ENST00000537824 DBNDD2Q9BQY9 259 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 MAGEF1Q9HAY2 307 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 COX16Q9P0S2 106 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 ADGRG1Q9Y653 693 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 ADD1P35611 737 aaKnown RBP6.04□□□□□ -1.44
CSMD1-215ENST00000537824 ITKQ08881 620 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 DARS2Q6PI48 645 aaKnown RBP6.04□□□□□ -1.44
CSMD1-215ENST00000537824 SFR1Q86XK3 245 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 TAGAPQ8N103 731 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 SIX6OS1Q8N1H7 587 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 MAML3Q96JK9 1138 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 KDM5DQ9BY66 1539 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 SYNGAP1Q96PV0 1343 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 NFIBO00712 420 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 KCNB1Q14721 858 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 EXT2Q93063 718 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 PLXNC1O60486 1568 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 MAGEA13PA6NCF6 341 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 BTBD18B2RXH4 712 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 CCDC188H7C350 402 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 OR52Z1P0C646 297 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 COPS2P61201 443 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 TIMM10P62072 90 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 KIF23Q02241 960 aaPredicted RBP6.04□□□□□ -1.44
CSMD1-215ENST00000537824 INPP5AQ14642 412 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 PDIK1LQ8N165 341 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 GRAMD1AQ96CP6 724 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 THTPAQ9BU02 230 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 EDEM3Q9BZQ6 932 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 PARVGQ9HBI0 331 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 ARL4CP56559 192 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 LRIG3Q6UXM1 1119 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 MYCBPAPQ8TBZ2 947 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 PBXIP1Q96AQ6 731 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 SUGCTQ9HAC7 445 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 MRPL40Q9NQ50 206 aaKnown RBP6.04□□□□□ -1.44
CSMD1-215ENST00000537824 GINM1Q9NU53 330 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 ITGB1BP2Q9UKP3 347 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 GMEB1Q9Y692 573 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 ZGRF1Q86YA3 2104 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 ASNA1O43681 348 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 ANKRD27Q96NW4 1050 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 PNKPQ96T60 521 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 KDM4CQ9H3R0 1056 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 SEC24CP53992 1094 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 MTF1Q14872 753 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 TAF1BQ53T94 588 aaPredicted RBP6.04□□□□□ -1.44
CSMD1-215ENST00000537824 ELMSAN1Q6PJG2 1045 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 C17orf50Q8WW18 174 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 PAGE5Q96GU1 130 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.04□□□□□ -1.441e-7■□□□□ 9.3
CSMD1-215ENST00000537824 BTBD7Q9P203 1132 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 DKK3Q9UBP4 350 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 HEATR5AQ86XA9 2040 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 ABCA5Q8WWZ7 1642 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 P4HA1P13674 534 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 FGFR4P22455 802 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 ADARP55265 1226 aaKnown RBP6.04□□□□□ -1.44
CSMD1-215ENST00000537824 RESP18Q5W5W9 173 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 CCNYL1Q8N7R7 359 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 FAM81AQ8TBF8 368 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 MIEF2Q96C03 454 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 SLC52A1Q9NWF4 448 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 AP4S1Q9Y587 144 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 TMEM191CA6NGB0 347 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 TMEM191BP0C7N4 346 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 SKA2Q8WVK7 121 aaPredicted RBP6.04□□□□□ -1.44
CSMD1-215ENST00000537824 RNPC3Q96LT9 517 aaKnown RBP6.04□□□□□ -1.44
CSMD1-215ENST00000537824 GTSE1Q9NYZ3 720 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 R3HDM2Q9Y2K5 976 aaKnown RBP6.04□□□□□ -1.44
CSMD1-215ENST00000537824 DTNAQ9Y4J8 743 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 SESN1Q9Y6P5 492 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 WNK1Q9H4A3 2382 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 PCNX2A6NKB5 2137 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 ABCA4P78363 2273 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 PI4K2BG5E9Z4 385 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 DDX39AO00148 427 aaKnown RBP6.04□□□□□ -1.44
CSMD1-215ENST00000537824 PDZD4Q76G19 769 aaPredicted RBP6.04□□□□□ -1.44
CSMD1-215ENST00000537824 CCDC117Q8IWD4 279 aaPredicted RBP6.04□□□□□ -1.44
CSMD1-215ENST00000537824 CCDC127Q96BQ5 260 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 ZNF219Q9P2Y4 722 aaPredicted RBP6.04□□□□□ -1.44
CSMD1-215ENST00000537824 TARSP26639 723 aaKnown RBP6.04□□□□□ -1.44
CSMD1-215ENST00000537824 NCAPHQ15003 741 aa6.04□□□□□ -1.44
CSMD1-215ENST00000537824 EDC3Q96F86 508 aaKnown RBP6.04□□□□□ -1.44
CSMD1-215ENST00000537824 DDX47Q9H0S4 455 aaKnown RBP6.04□□□□□ -1.44
CSMD1-215ENST00000537824 IPPQ9Y573 584 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms