RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 PCDHGC5Q9Y5F6 944 aa9.58□□□□□ -0.88
USP28-203ENST00000537490 REV3LO60673 3130 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 DENND3A2RUS2 1198 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 TBKBP1A7MCY6 615 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 MSH4O15457 936 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 FGFR1P11362 822 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 PSMA5P28066 241 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 CLCN3P51790 818 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 TOB2Q14106 344 aaPredicted RBP9.57□□□□□ -0.88
USP28-203ENST00000537490 DSC3Q14574 896 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 SMAD2Q15796 467 aaKnown RBP9.57□□□□□ -0.88
USP28-203ENST00000537490 ODR4Q5SWX8 454 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 EFCAB12Q6NXP0 572 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 RBM23Q86U06 439 aaKnown RBP9.57□□□□□ -0.88
USP28-203ENST00000537490 ADHFE1Q8IWW8 467 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 LRRC71Q8N4P6 559 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 LINC01465Q8N7H1 131 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 CCDC148Q8NFR7 591 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 BICD2Q8TD16 824 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 GJA10Q969M2 543 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 FAM122AQ96E09 287 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 CCDC136Q96JN2 1154 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 ZNF668Q96K58 619 aaPredicted RBP9.57□□□□□ -0.88
USP28-203ENST00000537490 LARP6Q9BRS8 491 aaKnown RBP9.57□□□□□ -0.88
USP28-203ENST00000537490 ADAMTS10Q9H324 1103 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 ZSWIM6Q9HCJ5 1215 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 DISC1Q9NRI5 854 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 TYW1Q9NV66 732 aaKnown RBP9.57□□□□□ -0.88
USP28-203ENST00000537490 CLEC1BQ9P126 229 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 PRKAG3Q9UGI9 489 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 FAM50BQ9Y247 325 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 SAMM50Q9Y512 469 aa9.57□□□□□ -0.88
USP28-203ENST00000537490 RALGAPA2Q2PPJ7 1873 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 NLRC5Q86WI3 1866 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 WDR64B1ANS9 1081 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 MAGEB2O15479 319 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 DCXO43602 365 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 OATP04181 439 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 ALADP13716 330 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 NRIP1P48552 1158 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 NDUFV1P49821 464 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 USP11P51784 963 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 NLRP11P59045 1033 aaKnown RBP9.56□□□□□ -0.88
USP28-203ENST00000537490 NLRP5P59047 1200 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 SMAD4Q13485 552 aaKnown RBP9.56□□□□□ -0.88
USP28-203ENST00000537490 UGCGQ16739 394 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 SPOUT1Q5T280 376 aaKnown RBP9.56□□□□□ -0.88
USP28-203ENST00000537490 FAM43BQ6ZT52 329 aaPredicted RBP9.56□□□□□ -0.88
USP28-203ENST00000537490 RUFY3Q7L099 469 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 EFHBQ8N7U6 833 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 TBCKQ8TEA7 893 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 SLC5A5Q92911 643 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 MSLNLQ96KJ4 702 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 UNC45AQ9H3U1 944 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 CWH43Q9H720 699 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 ATP6V0A4Q9HBG4 840 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 SH3GLB2Q9NR46 395 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 NRBP2Q9NSY0 501 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 RNF19AQ9NV58 838 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 TMEM161AQ9NX61 479 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 TCEAL9Q9UHQ7 104 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 CD207Q9UJ71 328 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 CEP131Q9UPN4 1083 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 AKT3Q9Y243 479 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 HCN4Q9Y3Q4 1203 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 PCDHB12Q9Y5F1 795 aa9.56□□□□□ -0.88
USP28-203ENST00000537490 XIRP2A4UGR9 3374 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 PRR33A8MZF0 331 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 PER2O15055 1255 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 CHMP2AO43633 222 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 GAS7O60861 476 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 PSMD10O75832 226 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 FGF18O76093 207 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 REC8O95072 547 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 STBD1O95210 358 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 EYA4O95677 639 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 GLP2RO95838 553 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 EIF4BP23588 611 aaKnown RBP9.55□□□□□ -0.88
USP28-203ENST00000537490 GPC3P51654 580 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 ERVFC1P60507 584 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 RBM10P98175 930 aaKnown RBP9.55□□□□□ -0.88
USP28-203ENST00000537490 PRKCEQ02156 737 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 SSRP1Q08945 709 aaKnown RBP9.55□□□□□ -0.88
USP28-203ENST00000537490 LRCH2Q5VUJ6 765 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 LRRC55Q6ZSA7 311 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 COLGALT1Q8NBJ5 622 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 MICAL1Q8TDZ2 1067 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 PPP2R3CQ969Q6 453 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 FAM167AQ96KS9 214 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 AIFM3Q96NN9 605 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 CASD1Q96PB1 797 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 MAP7D2Q96T17 732 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 RIT2Q99578 217 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 TEKT3Q9BXF9 490 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 ELAC1Q9H777 363 aaKnown RBP9.55□□□□□ -0.88
USP28-203ENST00000537490 TLE6Q9H808 572 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 AAASQ9NRG9 546 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 BARX2Q9UMQ3 279 aaPredicted RBP9.55□□□□□ -0.88
USP28-203ENST00000537490 PCDHA4Q9UN74 947 aa9.55□□□□□ -0.88
USP28-203ENST00000537490 ARIH1Q9Y4X5 557 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms