RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 GRIN2CQ14957 1233 aa19.4■□□□□ 0.7
GPN3-202ENST00000537466 LARP1BQ659C4 914 aaKnown RBP19.4■□□□□ 0.7
GPN3-202ENST00000537466 FAM117BQ6P1L5 589 aa19.4■□□□□ 0.7
GPN3-202ENST00000537466 C4orf19Q8IY42 314 aa19.4■□□□□ 0.7
GPN3-202ENST00000537466 MYOCDQ8IZQ8 938 aa19.4■□□□□ 0.7
GPN3-202ENST00000537466 C4orf32Q8N8J7 132 aa19.4■□□□□ 0.7
GPN3-202ENST00000537466 HSD17B14Q9BPX1 270 aa19.4■□□□□ 0.7
GPN3-202ENST00000537466 AKT3Q9Y243 479 aa19.4■□□□□ 0.7
GPN3-202ENST00000537466 SQORQ9Y6N5 450 aa19.4■□□□□ 0.7
GPN3-202ENST00000537466 IGKV6-21A0A0C4DH24 114 aa19.39■□□□□ 0.69
GPN3-202ENST00000537466 DKC1O60832 514 aaKnown RBP eCLIP19.39■□□□□ 0.69
GPN3-202ENST00000537466 ARHGEF15O94989 841 aa19.39■□□□□ 0.69
GPN3-202ENST00000537466 GJB5O95377 273 aa19.39■□□□□ 0.69
GPN3-202ENST00000537466 AMHP03971 560 aa19.39■□□□□ 0.69
GPN3-202ENST00000537466 TECP42680 631 aa19.39■□□□□ 0.69
GPN3-202ENST00000537466 TMEM266Q2M3C6 531 aa19.39■□□□□ 0.69
GPN3-202ENST00000537466 TPH2Q8IWU9 490 aa19.39■□□□□ 0.69
GPN3-202ENST00000537466 USP38Q8NB14 1042 aa19.39■□□□□ 0.69
GPN3-202ENST00000537466 CDX2Q99626 313 aaPredicted RBP19.39■□□□□ 0.69
GPN3-202ENST00000537466 OSMRQ99650 979 aa19.39■□□□□ 0.69
GPN3-202ENST00000537466 ZSWIM4Q9H7M6 989 aa19.39■□□□□ 0.69
GPN3-202ENST00000537466 SLC28A3Q9HAS3 691 aa19.39■□□□□ 0.69
GPN3-202ENST00000537466 CYP26B1Q9NR63 512 aa19.39■□□□□ 0.69
GPN3-202ENST00000537466 PADI3Q9ULW8 664 aa19.39■□□□□ 0.69
GPN3-202ENST00000537466 NLRC5Q86WI3 1866 aa19.39■□□□□ 0.69
GPN3-202ENST00000537466 COL6A3P12111 3177 aa19.38■□□□□ 0.69
GPN3-202ENST00000537466 LCHNA4D1U4 455 aa19.38■□□□□ 0.69
GPN3-202ENST00000537466 K7ELQ4 463 aaPredicted RBP19.38■□□□□ 0.69
GPN3-202ENST00000537466 TLL1O43897 1013 aa19.38■□□□□ 0.69
GPN3-202ENST00000537466 TMOD1P28289 359 aa19.38■□□□□ 0.69
GPN3-202ENST00000537466 YWHABP31946 246 aaKnown RBP19.38■□□□□ 0.69
GPN3-202ENST00000537466 NLRP11P59045 1033 aaKnown RBP19.38■□□□□ 0.69
GPN3-202ENST00000537466 PPP2R2DQ66LE6 453 aa19.38■□□□□ 0.69
GPN3-202ENST00000537466 LINC01599Q8WXQ3 324 aa19.38■□□□□ 0.69
GPN3-202ENST00000537466 ZNF668Q96K58 619 aaPredicted RBP19.38■□□□□ 0.69
GPN3-202ENST00000537466 MAP7D2Q96T17 732 aa19.38■□□□□ 0.69
GPN3-202ENST00000537466 ZBED2Q9BTP6 218 aa19.38■□□□□ 0.69
GPN3-202ENST00000537466 NOC2LQ9Y3T9 749 aaKnown RBP19.38■□□□□ 0.69
GPN3-202ENST00000537466 MAFO75444 373 aaPredicted RBP19.37■□□□□ 0.69
GPN3-202ENST00000537466 CRYBB1P53674 252 aaPredicted RBP19.37■□□□□ 0.69
GPN3-202ENST00000537466 PAK2Q13177 524 aa19.37■□□□□ 0.69
GPN3-202ENST00000537466 MYLIPQ8WY64 445 aa19.37■□□□□ 0.69
GPN3-202ENST00000537466 CEP170P1Q96L14 293 aa19.37■□□□□ 0.69
GPN3-202ENST00000537466 ADAMTS10Q9H324 1103 aa19.37■□□□□ 0.69
GPN3-202ENST00000537466 COL4A4P53420 1690 aaPredicted RBP19.36■□□□□ 0.69
GPN3-202ENST00000537466 ENPP3O14638 875 aa19.36■□□□□ 0.69
GPN3-202ENST00000537466 UPP2O95045 317 aa19.36■□□□□ 0.69
GPN3-202ENST00000537466 GPC3P51654 580 aa19.36■□□□□ 0.69
GPN3-202ENST00000537466 PTGDRQ13258 359 aa19.36■□□□□ 0.69
GPN3-202ENST00000537466 SPRED2Q7Z698 418 aa19.36■□□□□ 0.69
GPN3-202ENST00000537466 RTN4RL1Q86UN2 441 aaPredicted RBP19.36■□□□□ 0.69
GPN3-202ENST00000537466 NEK9Q8TD19 979 aa19.36■□□□□ 0.69
GPN3-202ENST00000537466 TOP1MTQ969P6 601 aa19.36■□□□□ 0.69
GPN3-202ENST00000537466 TMX1Q9H3N1 280 aa19.36■□□□□ 0.69
GPN3-202ENST00000537466 ERVK-5Q9HDB9 667 aa19.36■□□□□ 0.69
GPN3-202ENST00000537466 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.36■□□□□ 0.69
GPN3-202ENST00000537466 FOXD4L1Q9NU39 408 aa19.36■□□□□ 0.69
GPN3-202ENST00000537466 A0A087WWV3 80 aa19.35■□□□□ 0.69
GPN3-202ENST00000537466 RPS6KA5O75582 802 aa19.35■□□□□ 0.69
GPN3-202ENST00000537466 LYPLA2O95372 231 aa19.35■□□□□ 0.69
GPN3-202ENST00000537466 SPATA31C1P0DKV0 1188 aa19.35■□□□□ 0.69
GPN3-202ENST00000537466 NFX1Q12986 1120 aaKnown RBP19.35■□□□□ 0.69
GPN3-202ENST00000537466 RILPL1Q5EBL4 403 aa19.35■□□□□ 0.69
GPN3-202ENST00000537466 SNX21Q969T3 373 aa19.35■□□□□ 0.69
GPN3-202ENST00000537466 RAD9AQ99638 391 aa19.35■□□□□ 0.69
GPN3-202ENST00000537466 BMP2KQ9NSY1 1161 aaPredicted RBP19.35■□□□□ 0.69
GPN3-202ENST00000537466 MYH15Q9Y2K3 1946 aa19.35■□□□□ 0.69
GPN3-202ENST00000537466 MED24O75448 989 aa19.35■□□□□ 0.69
GPN3-202ENST00000537466 TAP1Q03518 808 aa19.35■□□□□ 0.69
GPN3-202ENST00000537466 XKR9Q5GH70 373 aa19.35■□□□□ 0.69
GPN3-202ENST00000537466 OTUD6AQ7L8S5 288 aa19.35■□□□□ 0.69
GPN3-202ENST00000537466 FAM228AQ86W67 206 aa19.35■□□□□ 0.69
GPN3-202ENST00000537466 CATSPER3Q86XQ3 398 aa19.35■□□□□ 0.69
GPN3-202ENST00000537466 INTS4Q96HW7 963 aaKnown RBP19.35■□□□□ 0.69
GPN3-202ENST00000537466 PRDM12Q9H4Q4 367 aa19.35■□□□□ 0.69
GPN3-202ENST00000537466 DHX33Q9H6R0 707 aaKnown RBP19.35■□□□□ 0.69
GPN3-202ENST00000537466 ST3GAL5Q9UNP4 418 aa19.35■□□□□ 0.69
GPN3-202ENST00000537466 STXBP5LQ9Y2K9 1186 aa19.35■□□□□ 0.69
GPN3-202ENST00000537466 EYSQ5T1H1 3165 aa19.35■□□□□ 0.69
GPN3-202ENST00000537466 COL4A6Q14031 1691 aa19.34■□□□□ 0.69
GPN3-202ENST00000537466 KIAA1671Q9BY89 1806 aa19.34■□□□□ 0.69
GPN3-202ENST00000537466 RALGAPA2Q2PPJ7 1873 aa19.34■□□□□ 0.69
GPN3-202ENST00000537466 VPS37CA5D8V6 355 aaPredicted RBP19.34■□□□□ 0.69
GPN3-202ENST00000537466 MGEA5O60502 916 aa19.34■□□□□ 0.69
GPN3-202ENST00000537466 DNM2P50570 870 aa19.34■□□□□ 0.69
GPN3-202ENST00000537466 FXR2P51116 673 aaKnown RBP eCLIP19.34■□□□□ 0.69
GPN3-202ENST00000537466 POLGP54098 1239 aaPredicted RBP19.34■□□□□ 0.69
GPN3-202ENST00000537466 HTRA4P83105 476 aaPredicted RBP19.34■□□□□ 0.69
GPN3-202ENST00000537466 PIGOQ8TEQ8 1089 aa19.34■□□□□ 0.69
GPN3-202ENST00000537466 SLC7A3Q8WY07 619 aa19.34■□□□□ 0.69
GPN3-202ENST00000537466 FTHL17Q9BXU8 183 aa19.34■□□□□ 0.69
GPN3-202ENST00000537466 CERS4Q9HA82 394 aa19.34■□□□□ 0.69
GPN3-202ENST00000537466 SUCLA2Q9P2R7 463 aaPredicted RBP19.34■□□□□ 0.69
GPN3-202ENST00000537466 FNDC1Q4ZHG4 1894 aaPredicted RBP19.33■□□□□ 0.69
GPN3-202ENST00000537466 RFC5P40937 340 aa19.33■□□□□ 0.68
GPN3-202ENST00000537466 IL17AQ16552 155 aa19.33■□□□□ 0.68
GPN3-202ENST00000537466 FERMT3Q86UX7 667 aa19.33■□□□□ 0.68
GPN3-202ENST00000537466 RHPN2Q8IUC4 686 aa19.33■□□□□ 0.68
GPN3-202ENST00000537466 KSR1Q8IVT5 923 aa19.33■□□□□ 0.68
GPN3-202ENST00000537466 NLRP7Q8WX94 980 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms