RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 MIS18BP1Q6P0N0 1132 aa14.07□□□□□ -0.16
PRKDC-207ENST00000536483 KRT25Q7Z3Z0 450 aa14.07□□□□□ -0.16
PRKDC-207ENST00000536483 NPAS4Q8IUM7 802 aa14.07□□□□□ -0.16
PRKDC-207ENST00000536483 CMTR2Q8IYT2 770 aaKnown RBP14.07□□□□□ -0.16
PRKDC-207ENST00000536483 NSUN7Q8NE18 718 aaKnown RBP14.07□□□□□ -0.16
PRKDC-207ENST00000536483 P2RX5Q93086 422 aa14.07□□□□□ -0.16
PRKDC-207ENST00000536483 CELF4Q9BZC1 486 aaKnown RBP14.07□□□□□ -0.16
PRKDC-207ENST00000536483 ORC3Q9UBD5 711 aaPredicted RBP14.07□□□□□ -0.16
PRKDC-207ENST00000536483 ATG2AQ2TAZ0 1938 aa14.07□□□□□ -0.16
PRKDC-207ENST00000536483 MSH4O15457 936 aa14.06□□□□□ -0.16
PRKDC-207ENST00000536483 HBP1O60381 514 aa14.06□□□□□ -0.16
PRKDC-207ENST00000536483 LARGE1O95461 756 aa14.06□□□□□ -0.16
PRKDC-207ENST00000536483 ITGB1P05556 798 aa14.06□□□□□ -0.16
PRKDC-207ENST00000536483 STAG3L1P0CL83 205 aa14.06□□□□□ -0.16
PRKDC-207ENST00000536483 IBSPP21815 317 aaPredicted RBP14.06□□□□□ -0.16
PRKDC-207ENST00000536483 GATMP50440 423 aa14.06□□□□□ -0.16
PRKDC-207ENST00000536483 PAK2Q13177 524 aa14.06□□□□□ -0.16
PRKDC-207ENST00000536483 NONOQ15233 471 aaKnown RBP eCLIP14.06□□□□□ -0.16
PRKDC-207ENST00000536483 TMEM266Q2M3C6 531 aa14.06□□□□□ -0.16
PRKDC-207ENST00000536483 FAM160B1Q5W0V3 765 aa14.06□□□□□ -0.16
PRKDC-207ENST00000536483 PPP4R3AQ6IN85 833 aa14.06□□□□□ -0.16
PRKDC-207ENST00000536483 MTHFD1LQ6UB35 978 aa14.06□□□□□ -0.16
PRKDC-207ENST00000536483 CCDC60Q8IWA6 550 aaPredicted RBP14.06□□□□□ -0.16
PRKDC-207ENST00000536483 KLHL23Q8NBE8 558 aa14.06□□□□□ -0.16
PRKDC-207ENST00000536483 RDM1Q8NG50 284 aa14.06□□□□□ -0.16
PRKDC-207ENST00000536483 SPPL3Q8TCT6 385 aa14.06□□□□□ -0.16
PRKDC-207ENST00000536483 ATP8B4Q8TF62 1192 aa14.06□□□□□ -0.16
PRKDC-207ENST00000536483 LIMCH1Q9UPQ0 1083 aa14.06□□□□□ -0.16
PRKDC-207ENST00000536483 PCDHA10Q9Y5I2 948 aa14.06□□□□□ -0.16
PRKDC-207ENST00000536483 IGSF9BQ9UPX0 1349 aa14.06□□□□□ -0.16
PRKDC-207ENST00000536483 PIEZO1Q92508 2521 aa14.06□□□□□ -0.16
PRKDC-207ENST00000536483 COL1A2P08123 1366 aa14.06□□□□□ -0.16
PRKDC-207ENST00000536483 WDFY4Q6ZS81 3184 aa14.06□□□□□ -0.16
PRKDC-207ENST00000536483 SMIM35A0A1B0GVV1 85 aa14.05□□□□□ -0.16
PRKDC-207ENST00000536483 DDX39AO00148 427 aaKnown RBP14.05□□□□□ -0.16
PRKDC-207ENST00000536483 PSMD10O75832 226 aa14.05□□□□□ -0.16
PRKDC-207ENST00000536483 ATP4AP20648 1035 aa14.05□□□□□ -0.16
PRKDC-207ENST00000536483 NDUFV1P49821 464 aa14.05□□□□□ -0.16
PRKDC-207ENST00000536483 ST3GAL1Q11201 340 aa14.05□□□□□ -0.16
PRKDC-207ENST00000536483 NFX1Q12986 1120 aaKnown RBP14.05□□□□□ -0.16
PRKDC-207ENST00000536483 ADAM15Q13444 863 aa14.05□□□□□ -0.16
PRKDC-207ENST00000536483 SMAD4Q13485 552 aaKnown RBP14.05□□□□□ -0.16
PRKDC-207ENST00000536483 NAALADL2Q58DX5 795 aa14.05□□□□□ -0.16
PRKDC-207ENST00000536483 ADGRD2Q7Z7M1 963 aa14.05□□□□□ -0.16
PRKDC-207ENST00000536483 NME8Q8N427 588 aa14.05□□□□□ -0.16
PRKDC-207ENST00000536483 NECAB1Q8N987 351 aa14.05□□□□□ -0.16
PRKDC-207ENST00000536483 ETNPPLQ8TBG4 499 aa14.05□□□□□ -0.16
PRKDC-207ENST00000536483 POF1BQ8WVV4 589 aa14.05□□□□□ -0.16
PRKDC-207ENST00000536483 TNFRSF25Q93038 417 aa14.05□□□□□ -0.16
PRKDC-207ENST00000536483 LLPHQ9BRT6 129 aaKnown RBP14.05□□□□□ -0.16
PRKDC-207ENST00000536483 TMX1Q9H3N1 280 aa14.05□□□□□ -0.16
PRKDC-207ENST00000536483 MUTYHQ9UIF7 546 aa14.05□□□□□ -0.16
PRKDC-207ENST00000536483 CD207Q9UJ71 328 aa14.05□□□□□ -0.16
PRKDC-207ENST00000536483 KCNJ14Q9UNX9 436 aa14.05□□□□□ -0.16
PRKDC-207ENST00000536483 GINS2Q9Y248 185 aa14.05□□□□□ -0.16
PRKDC-207ENST00000536483 WDR64B1ANS9 1081 aa14.04□□□□□ -0.16
PRKDC-207ENST00000536483 ZBTB42B2RXF5 422 aa14.04□□□□□ -0.16
PRKDC-207ENST00000536483 PSAPP07602 524 aa14.04□□□□□ -0.16
PRKDC-207ENST00000536483 GCFC2P16383 781 aaKnown RBP14.04□□□□□ -0.16
PRKDC-207ENST00000536483 KLRC1P26715 233 aa14.04□□□□□ -0.16
PRKDC-207ENST00000536483 SFNP31947 248 aa14.04□□□□□ -0.16
PRKDC-207ENST00000536483 ZNF484Q5JVG2 852 aa14.04□□□□□ -0.16
PRKDC-207ENST00000536483 SWSAP1Q6NVH7 229 aa14.04□□□□□ -0.16
PRKDC-207ENST00000536483 ALYREFQ86V81 257 aaKnown RBP14.04□□□□□ -0.16
PRKDC-207ENST00000536483 BBXQ8WY36 941 aaPredicted RBP14.04□□□□□ -0.16
PRKDC-207ENST00000536483 PPP2R3CQ969Q6 453 aa14.04□□□□□ -0.16
PRKDC-207ENST00000536483 ZSCAN31Q96LW9 406 aaPredicted RBP14.04□□□□□ -0.16
PRKDC-207ENST00000536483 POP1Q99575 1024 aaKnown RBP14.04□□□□□ -0.16
PRKDC-207ENST00000536483 NAP1L4Q99733 375 aaKnown RBP14.04□□□□□ -0.16
PRKDC-207ENST00000536483 KCNMB3Q9NPA1 279 aa14.04□□□□□ -0.16
PRKDC-207ENST00000536483 ZNF302Q9NR11 478 aa14.04□□□□□ -0.16
PRKDC-207ENST00000536483 LRFN2Q9ULH4 789 aa14.04□□□□□ -0.16
PRKDC-207ENST00000536483 KDM3AQ9Y4C1 1321 aa14.04□□□□□ -0.16
PRKDC-207ENST00000536483 TRIOO75962 3097 aa14.04□□□□□ -0.16
PRKDC-207ENST00000536483 BACH1O14867 736 aa14.03□□□□□ -0.16
PRKDC-207ENST00000536483 TBX3O15119 743 aa14.03□□□□□ -0.16
PRKDC-207ENST00000536483 NRIP1P48552 1158 aa14.03□□□□□ -0.16
PRKDC-207ENST00000536483 JAK3P52333 1124 aa14.03□□□□□ -0.16
PRKDC-207ENST00000536483 PDXDC2PQ6P474 469 aa14.03□□□□□ -0.16
PRKDC-207ENST00000536483 HFE2Q6ZVN8 426 aa14.03□□□□□ -0.16
PRKDC-207ENST00000536483 NEK8Q86SG6 692 aa14.03□□□□□ -0.16
PRKDC-207ENST00000536483 RBM23Q86U06 439 aaKnown RBP14.03□□□□□ -0.16
PRKDC-207ENST00000536483 RNF135Q8IUD6 432 aa14.03□□□□□ -0.16
PRKDC-207ENST00000536483 TMEM40Q8WWA1 233 aa14.03□□□□□ -0.16
PRKDC-207ENST00000536483 MSLNLQ96KJ4 702 aa14.03□□□□□ -0.16
PRKDC-207ENST00000536483 FAM20AQ96MK3 541 aa14.03□□□□□ -0.16
PRKDC-207ENST00000536483 CDHR5Q9HBB8 845 aa14.03□□□□□ -0.16
PRKDC-207ENST00000536483 ERVK-5Q9HDB9 667 aa14.03□□□□□ -0.16
PRKDC-207ENST00000536483 SH2B1Q9NRF2 756 aaPredicted RBP14.03□□□□□ -0.16
PRKDC-207ENST00000536483 DISC1Q9NRI5 854 aa14.03□□□□□ -0.16
PRKDC-207ENST00000536483 CLEC1BQ9P126 229 aa14.03□□□□□ -0.16
PRKDC-207ENST00000536483 NOC2LQ9Y3T9 749 aaKnown RBP14.03□□□□□ -0.16
PRKDC-207ENST00000536483 PCDHB7Q9Y5E2 793 aa14.03□□□□□ -0.16
PRKDC-207ENST00000536483 PCDHGC5Q9Y5F6 944 aa14.03□□□□□ -0.16
PRKDC-207ENST00000536483 LOXHD1Q8IVV2 1947 aa14.02□□□□□ -0.16
PRKDC-207ENST00000536483 CCDC194A0A1B0GVG4 234 aa14.02□□□□□ -0.17
PRKDC-207ENST00000536483 MGEA5O60502 916 aa14.02□□□□□ -0.17
PRKDC-207ENST00000536483 GAS7O60861 476 aa14.02□□□□□ -0.17
PRKDC-207ENST00000536483 RPS6KA5O75582 802 aa14.02□□□□□ -0.17
PRKDC-207ENST00000536483 TDP2O95551 362 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms