RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 KATNBL1Q9H079 304 aa12.79□□□□□ -0.36
CHRNB1-202ENST00000536404 ZSWIM4Q9H7M6 989 aa12.79□□□□□ -0.36
CHRNB1-202ENST00000536404 MAGEC2Q9UBF1 373 aaPredicted RBP12.79□□□□□ -0.36
CHRNB1-202ENST00000536404 FRMPD2Q68DX3 1309 aaPredicted RBP12.78□□□□□ -0.36
CHRNB1-202ENST00000536404 ANO9A1A5B4 782 aa12.78□□□□□ -0.36
CHRNB1-202ENST00000536404 KRT86O43790 486 aa12.78□□□□□ -0.36
CHRNB1-202ENST00000536404 PQBP1O60828 265 aaKnown RBP12.78□□□□□ -0.36
CHRNB1-202ENST00000536404 NEFHP12036 1026 aa12.78□□□□□ -0.36
CHRNB1-202ENST00000536404 CALML3P27482 149 aa12.78□□□□□ -0.36
CHRNB1-202ENST00000536404 KRT9P35527 623 aa12.78□□□□□ -0.36
CHRNB1-202ENST00000536404 STX17P56962 302 aa12.78□□□□□ -0.36
CHRNB1-202ENST00000536404 PTPN21Q16825 1174 aa12.78□□□□□ -0.36
CHRNB1-202ENST00000536404 TKFCQ3LXA3 575 aa12.78□□□□□ -0.36
CHRNB1-202ENST00000536404 C9orf50Q5SZB4 431 aa12.78□□□□□ -0.36
CHRNB1-202ENST00000536404 POTEDQ86YR6 584 aa12.78□□□□□ -0.36
CHRNB1-202ENST00000536404 ITFG2Q969R8 447 aa12.78□□□□□ -0.36
CHRNB1-202ENST00000536404 PNKPQ96T60 521 aa12.78□□□□□ -0.36
CHRNB1-202ENST00000536404 TSGA10Q9BZW7 698 aa12.78□□□□□ -0.36
CHRNB1-202ENST00000536404 ABHD16BQ9H3Z7 469 aa12.78□□□□□ -0.36
CHRNB1-202ENST00000536404 THAP9Q9H5L6 903 aa12.78□□□□□ -0.36
CHRNB1-202ENST00000536404 GPCPD1Q9NPB8 672 aa12.78□□□□□ -0.36
CHRNB1-202ENST00000536404 LUC7L2Q9Y383 392 aaKnown RBP12.78□□□□□ -0.36
CHRNB1-202ENST00000536404 EPN1Q9Y6I3 576 aaPredicted RBP12.78□□□□□ -0.36
CHRNB1-202ENST00000536404 ASTN1O14525 1302 aa12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 TNKSO95271 1327 aa12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 NDUFA10O95299 355 aa12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 CLTBP09497 229 aa12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 C6orf222P0C671 652 aaPredicted RBP12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 RHOXF2BP0C7M4 288 aa12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 CD44P16070 742 aaKnown RBP12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 ARHGAP25P42331 645 aa12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 VSNL1P62760 191 aa12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 AMPD2Q01433 879 aa12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 SEC23AQ15436 765 aa12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 DNAJC21Q5F1R6 531 aaKnown RBP12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 WWC2Q6AWC2 1192 aa12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 TRAPPC11Q7Z392 1133 aa12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 FAM114A1Q8IWE2 563 aa12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 CCDC170Q8IYT3 715 aa12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 AFAP1L1Q8TED9 768 aa12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 NELFBQ8WX92 580 aa12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 EPSTI1Q96J88 318 aa12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 PURBQ96QR8 312 aaKnown RBP12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 RHOXF2Q9BQY4 288 aa12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 IRX2Q9BZI1 471 aaPredicted RBP12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 MAGEF1Q9HAY2 307 aa12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 STARD7Q9NQZ5 370 aa12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 TCP11L1Q9NUJ3 509 aa12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 MTMR10Q9NXD2 777 aa12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 SAR1BQ9Y6B6 198 aa12.77□□□□□ -0.36
CHRNB1-202ENST00000536404 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.77□□□□□ -0.37
CHRNB1-202ENST00000536404 PPFIA4O75335 1185 aa12.77□□□□□ -0.37
CHRNB1-202ENST00000536404 MNAT1P51948 309 aa12.77□□□□□ -0.37
CHRNB1-202ENST00000536404 GJA9P57773 515 aa12.77□□□□□ -0.37
CHRNB1-202ENST00000536404 UBXN1Q04323 297 aa12.77□□□□□ -0.37
CHRNB1-202ENST00000536404 NEDD9Q14511 834 aa12.77□□□□□ -0.37
CHRNB1-202ENST00000536404 KCNB1Q14721 858 aa12.77□□□□□ -0.37
CHRNB1-202ENST00000536404 PPP2R5AQ15172 486 aa12.77□□□□□ -0.37
CHRNB1-202ENST00000536404 IFIT1BQ5T764 474 aaKnown RBP12.77□□□□□ -0.37
CHRNB1-202ENST00000536404 SYDE2Q5VT97 1194 aa12.77□□□□□ -0.37
CHRNB1-202ENST00000536404 PAPD7Q5XG87 772 aaKnown RBP12.77□□□□□ -0.37
CHRNB1-202ENST00000536404 BTNL9Q6UXG8 535 aa12.77□□□□□ -0.37
CHRNB1-202ENST00000536404 GBP6Q6ZN66 633 aa12.77□□□□□ -0.37
CHRNB1-202ENST00000536404 ACRBPQ8NEB7 543 aa12.77□□□□□ -0.37
CHRNB1-202ENST00000536404 OXER1Q8TDS5 423 aa12.77□□□□□ -0.37
CHRNB1-202ENST00000536404 ZSCAN10Q96SZ4 725 aaPredicted RBP12.77□□□□□ -0.37
CHRNB1-202ENST00000536404 UPF3AQ9H1J1 476 aaKnown RBP12.77□□□□□ -0.37
CHRNB1-202ENST00000536404 RANBP17Q9H2T7 1088 aaKnown RBP12.77□□□□□ -0.37
CHRNB1-202ENST00000536404 CYP39A1Q9NYL5 469 aa12.77□□□□□ -0.37
CHRNB1-202ENST00000536404 CCPG1Q9ULG6 757 aa12.77□□□□□ -0.37
CHRNB1-202ENST00000536404 CAPN11Q9UMQ6 739 aa12.77□□□□□ -0.37
CHRNB1-202ENST00000536404 FAN1Q9Y2M0 1017 aa12.77□□□□□ -0.37
CHRNB1-202ENST00000536404 SH3BP1Q9Y3L3 701 aa12.77□□□□□ -0.37
CHRNB1-202ENST00000536404 MOXD2PA6NHM9 499 aa12.76□□□□□ -0.37
CHRNB1-202ENST00000536404 LGALS16A8MUM7 142 aa12.76□□□□□ -0.37
CHRNB1-202ENST00000536404 KIAA0355O15063 1070 aa12.76□□□□□ -0.37
CHRNB1-202ENST00000536404 RPN1P04843 607 aaKnown RBP12.76□□□□□ -0.37
CHRNB1-202ENST00000536404 ASGR1P07306 291 aa12.76□□□□□ -0.37
CHRNB1-202ENST00000536404 CST5P28325 142 aaPredicted RBP12.76□□□□□ -0.37
CHRNB1-202ENST00000536404 CCT6AP40227 531 aaKnown RBP12.76□□□□□ -0.37
CHRNB1-202ENST00000536404 DNM2P50570 870 aa12.76□□□□□ -0.37
CHRNB1-202ENST00000536404 EPHB4P54760 987 aa12.76□□□□□ -0.37
CHRNB1-202ENST00000536404 BEX3Q00994 111 aa12.76□□□□□ -0.37
CHRNB1-202ENST00000536404 FAAP100Q0VG06 881 aa12.76□□□□□ -0.37
CHRNB1-202ENST00000536404 E2F4Q16254 413 aa12.76□□□□□ -0.37
CHRNB1-202ENST00000536404 GNASQ5JWF2 1037 aa12.76□□□□□ -0.37
CHRNB1-202ENST00000536404 NSMFQ6X4W1 530 aa12.76□□□□□ -0.37
CHRNB1-202ENST00000536404 USP49Q70CQ1 688 aa12.76□□□□□ -0.37
CHRNB1-202ENST00000536404 DNAJC7Q99615 494 aa12.76□□□□□ -0.37
CHRNB1-202ENST00000536404 CRACR2AQ9BSW2 395 aa12.76□□□□□ -0.37
CHRNB1-202ENST00000536404 CUEDC2Q9H467 287 aa12.76□□□□□ -0.37
CHRNB1-202ENST00000536404 PDGFCQ9NRA1 345 aa12.76□□□□□ -0.37
CHRNB1-202ENST00000536404 TMEM39AQ9NV64 488 aa12.76□□□□□ -0.37
CHRNB1-202ENST00000536404 A0A087X0B3 334 aa12.75□□□□□ -0.37
CHRNB1-202ENST00000536404 BICDL2A1A5D9 508 aa12.75□□□□□ -0.37
CHRNB1-202ENST00000536404 ASB14A6NK59 587 aa12.75□□□□□ -0.37
CHRNB1-202ENST00000536404 PSMA7O14818 248 aa12.75□□□□□ -0.37
CHRNB1-202ENST00000536404 ICAM1P05362 532 aa12.75□□□□□ -0.37
CHRNB1-202ENST00000536404 RAG1P15918 1043 aa12.75□□□□□ -0.37
CHRNB1-202ENST00000536404 TNFAIP2Q03169 654 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms