RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 ST5P78524 1137 aa4.06□□□□□ -1.76
SKA3-207ENST00000536239 ACAP1Q15027 740 aa4.06□□□□□ -1.76
SKA3-207ENST00000536239 ELAVL1Q15717 326 aaKnown RBP4.06□□□□□ -1.76
SKA3-207ENST00000536239 RABL3Q5HYI8 236 aa4.06□□□□□ -1.76
SKA3-207ENST00000536239 COLEC12Q5KU26 742 aa4.06□□□□□ -1.76
SKA3-207ENST00000536239 BCL6BQ8N143 479 aaPredicted RBP4.06□□□□□ -1.76
SKA3-207ENST00000536239 LPPQ93052 612 aa4.06□□□□□ -1.76
SKA3-207ENST00000536239 FBXW5Q969U6 566 aa4.06□□□□□ -1.76
SKA3-207ENST00000536239 BBC3Q96PG8 261 aaPredicted RBP4.06□□□□□ -1.76
SKA3-207ENST00000536239 MLST8Q9BVC4 326 aa4.06□□□□□ -1.76
SKA3-207ENST00000536239 GPR87Q9BY21 358 aa4.06□□□□□ -1.76
SKA3-207ENST00000536239 VWA7Q9Y334 891 aa4.06□□□□□ -1.76
SKA3-207ENST00000536239 TRAF6Q9Y4K3 522 aa4.06□□□□□ -1.76
SKA3-207ENST00000536239 COL4A3Q01955 1670 aa4.06□□□□□ -1.76
SKA3-207ENST00000536239 IQCA1LA6NCM1 817 aa4.05□□□□□ -1.76
SKA3-207ENST00000536239 PYGMP11217 842 aa4.05□□□□□ -1.76
SKA3-207ENST00000536239 KRTAP10-9P60411 292 aa4.05□□□□□ -1.76
SKA3-207ENST00000536239 PTPAQ15257 358 aa4.05□□□□□ -1.76
SKA3-207ENST00000536239 LY6G5CQ5SRR4 150 aa4.05□□□□□ -1.76
SKA3-207ENST00000536239 FAM111BQ6SJ93 734 aa4.05□□□□□ -1.76
SKA3-207ENST00000536239 GAREM2Q75VX8 874 aa4.05□□□□□ -1.76
SKA3-207ENST00000536239 C16orf59Q7L2K0 433 aa4.05□□□□□ -1.76
SKA3-207ENST00000536239 MAMDC2Q7Z304 686 aaPredicted RBP4.05□□□□□ -1.76
SKA3-207ENST00000536239 VPS37DQ86XT2 251 aa4.05□□□□□ -1.76
SKA3-207ENST00000536239 ADGRG3Q86Y34 549 aa4.05□□□□□ -1.76
SKA3-207ENST00000536239 SYNE4Q8N205 404 aa4.05□□□□□ -1.76
SKA3-207ENST00000536239 ZNF276Q8N554 614 aa4.05□□□□□ -1.76
SKA3-207ENST00000536239 SLC6A15Q9H2J7 730 aa4.05□□□□□ -1.76
SKA3-207ENST00000536239 CCSER2Q9H7U1 834 aa4.05□□□□□ -1.76
SKA3-207ENST00000536239 CAPN10Q9HC96 672 aa4.05□□□□□ -1.76
SKA3-207ENST00000536239 ST7Q9NRC1 585 aa4.05□□□□□ -1.76
SKA3-207ENST00000536239 TRPS1Q9UHF7 1281 aa4.05□□□□□ -1.76
SKA3-207ENST00000536239 CBLCQ9ULV8 474 aa4.05□□□□□ -1.76
SKA3-207ENST00000536239 FZD1Q9UP38 647 aa4.05□□□□□ -1.76
SKA3-207ENST00000536239 TRAV20A0A0B4J274 112 aa4.04□□□□□ -1.76
SKA3-207ENST00000536239 KLRG2A4D1S0 409 aaPredicted RBP4.04□□□□□ -1.76
SKA3-207ENST00000536239 GRID2IPA4D2P6 1211 aa4.04□□□□□ -1.76
SKA3-207ENST00000536239 ZNF561-AS1K7EIQ3 104 aa4.04□□□□□ -1.76
SKA3-207ENST00000536239 MMEP08473 750 aa4.04□□□□□ -1.76
SKA3-207ENST00000536239 ZNF37AP17032 561 aaPredicted RBP4.04□□□□□ -1.76
SKA3-207ENST00000536239 CD38P28907 300 aa4.04□□□□□ -1.76
SKA3-207ENST00000536239 RABGGTBP53611 331 aa4.04□□□□□ -1.76
SKA3-207ENST00000536239 SMAD3P84022 425 aaKnown RBP4.04□□□□□ -1.76
SKA3-207ENST00000536239 CRY1Q16526 586 aa4.04□□□□□ -1.76
SKA3-207ENST00000536239 KLHDC10Q6PID8 442 aa4.04□□□□□ -1.76
SKA3-207ENST00000536239 MTDHQ86UE4 582 aaKnown RBP4.04□□□□□ -1.76
SKA3-207ENST00000536239 PCDH19Q8TAB3 1148 aa4.04□□□□□ -1.76
SKA3-207ENST00000536239 PROKR1Q8TCW9 393 aa4.04□□□□□ -1.76
SKA3-207ENST00000536239 SLC7A6OSQ96CW6 309 aaPredicted RBP4.04□□□□□ -1.76
SKA3-207ENST00000536239 RPL10LQ96L21 214 aaKnown RBP4.04□□□□□ -1.76
SKA3-207ENST00000536239 GPHA2Q96T91 129 aa4.04□□□□□ -1.76
SKA3-207ENST00000536239 MNTQ99583 582 aa4.04□□□□□ -1.76
SKA3-207ENST00000536239 A0A0A6YYK5 440 aaPredicted RBP4.03□□□□□ -1.76
SKA3-207ENST00000536239 PRAMEF22A3QJZ6 481 aa4.03□□□□□ -1.76
SKA3-207ENST00000536239 INO80B-WBP1J3KQ70 363 aa4.03□□□□□ -1.76
SKA3-207ENST00000536239 AQP7O14520 342 aa4.03□□□□□ -1.76
SKA3-207ENST00000536239 KCNK3O14649 394 aa4.03□□□□□ -1.76
SKA3-207ENST00000536239 H2AFYO75367 372 aaKnown RBP4.03□□□□□ -1.76
SKA3-207ENST00000536239 MAFO75444 373 aaPredicted RBP4.03□□□□□ -1.76
SKA3-207ENST00000536239 ABHD16AO95870 558 aa4.03□□□□□ -1.76
SKA3-207ENST00000536239 ITGB1P05556 798 aa4.03□□□□□ -1.76
SKA3-207ENST00000536239 NR4A1P22736 598 aa4.03□□□□□ -1.76
SKA3-207ENST00000536239 SESN2P58004 480 aaPredicted RBP4.03□□□□□ -1.76
SKA3-207ENST00000536239 ADAM8P78325 824 aa4.03□□□□□ -1.76
SKA3-207ENST00000536239 SEC23AQ15436 765 aa4.03□□□□□ -1.76
SKA3-207ENST00000536239 STRIP1Q5VSL9 837 aa4.03□□□□□ -1.76
SKA3-207ENST00000536239 YOD1Q5VVQ6 348 aaPredicted RBP4.03□□□□□ -1.76
SKA3-207ENST00000536239 OLFML1Q6UWY5 402 aa4.03□□□□□ -1.76
SKA3-207ENST00000536239 HTR3DQ70Z44 454 aa4.03□□□□□ -1.76
SKA3-207ENST00000536239 THAP3Q8WTV1 239 aaPredicted RBP4.03□□□□□ -1.76
SKA3-207ENST00000536239 ASB15Q8WXK1 588 aa4.03□□□□□ -1.76
SKA3-207ENST00000536239 INO80BQ9C086 356 aaPredicted RBP4.03□□□□□ -1.76
SKA3-207ENST00000536239 TOR3AQ9H497 397 aa4.03□□□□□ -1.76
SKA3-207ENST00000536239 SYNPO2LQ9H987 977 aa4.03□□□□□ -1.76
SKA3-207ENST00000536239 ZNF408Q9H9D4 720 aa4.03□□□□□ -1.76
SKA3-207ENST00000536239 SMURF1Q9HCE7 757 aa4.03□□□□□ -1.76
SKA3-207ENST00000536239 PCDHA8Q9Y5H6 950 aa4.03□□□□□ -1.76
SKA3-207ENST00000536239 C2orf78A6NCI8 922 aa4.02□□□□□ -1.77
SKA3-207ENST00000536239 GOLGA6L6A8MZA4 724 aa4.02□□□□□ -1.77
SKA3-207ENST00000536239 GSTA4O15217 222 aa4.02□□□□□ -1.77
SKA3-207ENST00000536239 ERBB2P04626 1255 aa4.02□□□□□ -1.77
SKA3-207ENST00000536239 SRGAP2CP0DJJ0 459 aa4.02□□□□□ -1.77
SKA3-207ENST00000536239 APEX1P27695 318 aaKnown RBP4.02□□□□□ -1.77
SKA3-207ENST00000536239 LACTBP83111 547 aaPredicted RBP4.02□□□□□ -1.77
SKA3-207ENST00000536239 MAP3K12Q12852 859 aa4.02□□□□□ -1.77
SKA3-207ENST00000536239 CELF2-AS1Q8N7Q2 184 aa4.02□□□□□ -1.77
SKA3-207ENST00000536239 ANKRD53Q8N9V6 530 aa4.02□□□□□ -1.77
SKA3-207ENST00000536239 GBP4Q96PP9 640 aa4.02□□□□□ -1.77
SKA3-207ENST00000536239 TCF25Q9BQ70 676 aa4.02□□□□□ -1.77
SKA3-207ENST00000536239 ASB1Q9Y576 335 aa4.02□□□□□ -1.77
SKA3-207ENST00000536239 HS3ST4Q9Y661 456 aa4.02□□□□□ -1.77
SKA3-207ENST00000536239 POLR2AP24928 1970 aaKnown RBP4.02□□□□□ -1.77
SKA3-207ENST00000536239 UBE2QL1A1L167 161 aa4.01□□□□□ -1.77
SKA3-207ENST00000536239 GOLGA8BA8MQT2 603 aa4.01□□□□□ -1.77
SKA3-207ENST00000536239 GRXCR1A8MXD5 290 aa4.01□□□□□ -1.77
SKA3-207ENST00000536239 GOLGA6L22H0YM25 854 aa4.01□□□□□ -1.77
SKA3-207ENST00000536239 ARVCFO00192 962 aa4.01□□□□□ -1.77
SKA3-207ENST00000536239 B3GALT2O43825 422 aa4.01□□□□□ -1.77
SKA3-207ENST00000536239 PPFIA4O75335 1185 aa4.01□□□□□ -1.77
SKA3-207ENST00000536239 BPIFB4P59827 614 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms