RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 GRB10Q13322 594 aa12.02□□□□□ -0.49
UBE3B-205ENST00000535900 KARSQ15046 597 aaKnown RBP12.02□□□□□ -0.49
UBE3B-205ENST00000535900 CCDC85BQ15834 202 aaPredicted RBP12.02□□□□□ -0.49
UBE3B-205ENST00000535900 PTGISQ16647 500 aa12.02□□□□□ -0.49
UBE3B-205ENST00000535900 LRSAM1Q6UWE0 723 aa12.02□□□□□ -0.49
UBE3B-205ENST00000535900 CATSPER3Q86XQ3 398 aa12.02□□□□□ -0.49
UBE3B-205ENST00000535900 DHX37Q8IY37 1157 aaKnown RBP12.02□□□□□ -0.49
UBE3B-205ENST00000535900 PDILTQ8N807 584 aa12.02□□□□□ -0.49
UBE3B-205ENST00000535900 SEPT1Q8WYJ6 367 aa12.02□□□□□ -0.49
UBE3B-205ENST00000535900 GJA10Q969M2 543 aa12.02□□□□□ -0.49
UBE3B-205ENST00000535900 DHX58Q96C10 678 aa12.02□□□□□ -0.49
UBE3B-205ENST00000535900 ZFP91Q96JP5 570 aaPredicted RBP12.02□□□□□ -0.49
UBE3B-205ENST00000535900 SLC9A7Q96T83 725 aa12.02□□□□□ -0.49
UBE3B-205ENST00000535900 KATNAL1Q9BW62 490 aa12.02□□□□□ -0.49
UBE3B-205ENST00000535900 GZF1Q9H116 711 aaPredicted RBP12.02□□□□□ -0.49
UBE3B-205ENST00000535900 KBTBD4Q9NVX7 518 aa12.02□□□□□ -0.49
UBE3B-205ENST00000535900 KCND2Q9NZV8 630 aa12.02□□□□□ -0.49
UBE3B-205ENST00000535900 SAMM50Q9Y512 469 aa12.02□□□□□ -0.49
UBE3B-205ENST00000535900 COL4A4P53420 1690 aaPredicted RBP12.02□□□□□ -0.49
UBE3B-205ENST00000535900 PP2D1A8MPX8 630 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 NOP56O00567 594 aaKnown RBP12.01□□□□□ -0.49
UBE3B-205ENST00000535900 SLITRK3O94933 977 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 SMC2O95347 1197 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 CAVIN2O95810 425 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 CCNE2O96020 404 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 IQCF3P0C7M6 154 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 ZNF286BP0CG31 522 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 SPATA31C1P0DKV0 1188 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 MYOGP15173 224 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 CDC25AP30304 524 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 KCNJ6P48051 423 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 SLC26A2P50443 739 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 ACTR2P61160 394 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 SP2Q02086 613 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 ADGRE1Q14246 886 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 DGKDQ16760 1214 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 LONRF3Q496Y0 759 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 TPRNQ4KMQ1 711 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 FAM160B1Q5W0V3 765 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 PDXDC2PQ6P474 469 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 CNNM4Q6P4Q7 775 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 ABHD15Q6UXT9 468 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 SV2BQ7L1I2 683 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 CYFIP1Q7L576 1253 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 C4orf19Q8IY42 314 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 PPTC7Q8NI37 304 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 CAGE1Q8TC20 777 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 AFAP1L1Q8TED9 768 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 LARP4BQ92615 738 aaKnown RBP12.01□□□□□ -0.49
UBE3B-205ENST00000535900 RAD54LQ92698 747 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 PNMA5Q96PV4 448 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 PRDM6Q9NQX0 595 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 PKD2L1Q9P0L9 805 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 KIAA1024Q9UPX6 916 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 PPME1Q9Y570 386 aa12.01□□□□□ -0.49
UBE3B-205ENST00000535900 MYH9P35579 1960 aaKnown RBP12□□□□□ -0.49
UBE3B-205ENST00000535900 A0A087X0B3 334 aa12□□□□□ -0.49
UBE3B-205ENST00000535900 IGKV6D-21A0A0A0MT36 114 aa12□□□□□ -0.49
UBE3B-205ENST00000535900 DDX39AO00148 427 aaKnown RBP12□□□□□ -0.49
UBE3B-205ENST00000535900 CHMP2AO43633 222 aa12□□□□□ -0.49
UBE3B-205ENST00000535900 GTPBP6O43824 516 aaPredicted RBP12□□□□□ -0.49
UBE3B-205ENST00000535900 MED24O75448 989 aa12□□□□□ -0.49
UBE3B-205ENST00000535900 EYA4O95677 639 aa12□□□□□ -0.49
UBE3B-205ENST00000535900 CA3P07451 260 aa12□□□□□ -0.49
UBE3B-205ENST00000535900 PSEN2P49810 448 aa12□□□□□ -0.49
UBE3B-205ENST00000535900 POSTNQ15063 836 aa12□□□□□ -0.49
UBE3B-205ENST00000535900 NAALADL2Q58DX5 795 aa12□□□□□ -0.49
UBE3B-205ENST00000535900 L1TD1Q5T7N2 865 aaKnown RBP12□□□□□ -0.49
UBE3B-205ENST00000535900 GDF6Q6KF10 455 aaPredicted RBP12□□□□□ -0.49
UBE3B-205ENST00000535900 OTUD6AQ7L8S5 288 aa12□□□□□ -0.49
UBE3B-205ENST00000535900 TPH2Q8IWU9 490 aa12□□□□□ -0.49
UBE3B-205ENST00000535900 C7orf31Q8N865 590 aa12□□□□□ -0.49
UBE3B-205ENST00000535900 VWCEQ96DN2 955 aa12□□□□□ -0.49
UBE3B-205ENST00000535900 FAM167AQ96KS9 214 aa12□□□□□ -0.49
UBE3B-205ENST00000535900 SPATA33Q96N06 139 aa12□□□□□ -0.49
UBE3B-205ENST00000535900 LXNQ9BS40 222 aa12□□□□□ -0.49
UBE3B-205ENST00000535900 PANK2Q9BZ23 570 aa12□□□□□ -0.49
UBE3B-205ENST00000535900 TSPYL2Q9H2G4 693 aaPredicted RBP12□□□□□ -0.49
UBE3B-205ENST00000535900 AZI2Q9H6S1 392 aa12□□□□□ -0.49
UBE3B-205ENST00000535900 BMP2KQ9NSY1 1161 aaPredicted RBP12□□□□□ -0.49
UBE3B-205ENST00000535900 ANKEF1Q9NU02 776 aa12□□□□□ -0.49
UBE3B-205ENST00000535900 SERTAD1Q9UHV2 236 aa12□□□□□ -0.49
UBE3B-205ENST00000535900 DBR1Q9UK59 544 aaKnown RBP12□□□□□ -0.49
UBE3B-205ENST00000535900 CUL9Q8IWT3 2517 aa12□□□□□ -0.49
UBE3B-205ENST00000535900 VCANP13611 3396 aa11.99□□□□□ -0.49
UBE3B-205ENST00000535900 POTEB3A0JP26 581 aa11.99□□□□□ -0.49
UBE3B-205ENST00000535900 GOLGA6L3A6NEY3 463 aa11.99□□□□□ -0.49
UBE3B-205ENST00000535900 SORBS3O60504 671 aa11.99□□□□□ -0.49
UBE3B-205ENST00000535900 PPFIA4O75335 1185 aa11.99□□□□□ -0.49
UBE3B-205ENST00000535900 LGR5O75473 907 aa11.99□□□□□ -0.49
UBE3B-205ENST00000535900 BAIAP3O94812 1187 aa11.99□□□□□ -0.49
UBE3B-205ENST00000535900 HOXD8P13378 290 aaPredicted RBP11.99□□□□□ -0.49
UBE3B-205ENST00000535900 SELPP16109 830 aa11.99□□□□□ -0.49
UBE3B-205ENST00000535900 MRE11P49959 708 aa11.99□□□□□ -0.49
UBE3B-205ENST00000535900 MFSD10Q14728 455 aa11.99□□□□□ -0.49
UBE3B-205ENST00000535900 SKIV2LQ15477 1246 aaKnown RBP11.99□□□□□ -0.49
UBE3B-205ENST00000535900 ZRSR1Q15695 479 aaKnown RBP11.99□□□□□ -0.49
UBE3B-205ENST00000535900 NT5DC1Q5TFE4 455 aa11.99□□□□□ -0.49
UBE3B-205ENST00000535900 POTEBQ6S5H4 581 aa11.99□□□□□ -0.49
UBE3B-205ENST00000535900 LRRC8DQ7L1W4 858 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms