RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 SAMM50Q9Y512 469 aa9.99□□□□□ -0.81
CHD4-204ENST00000535810 MYH9P35579 1960 aaKnown RBP9.98□□□□□ -0.81
CHD4-204ENST00000535810 CCDC194A0A1B0GVG4 234 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 LINC01553A4QN01 128 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 RFXAPO00287 272 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 SLC37A4O43826 429 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 ZNF862O60290 1169 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 JAK2O60674 1132 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 C22orf31O95567 290 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 IGFBP4P22692 258 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 KLRC1P26715 233 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 CD52P31358 61 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 SFNP31947 248 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 JAK3P52333 1124 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 HTRA4P83105 476 aaPredicted RBP9.98□□□□□ -0.81
CHD4-204ENST00000535810 PRKCEQ02156 737 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 UGCGQ16739 394 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 LETM2Q2VYF4 491 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 ZNF484Q5JVG2 852 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 IER5Q5VY09 327 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 B3GNT9Q6UX72 402 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 TSHZ1Q6ZSZ6 1077 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 PIK3AP1Q6ZUJ8 805 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 NEK8Q86SG6 692 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 CKAP2LQ8IYA6 745 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 KIAA0319LQ8IZA0 1049 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 PTCD2Q8WV60 388 aaKnown RBP9.98□□□□□ -0.81
CHD4-204ENST00000535810 PPM1EQ8WY54 764 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 TNFRSF25Q93038 417 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 TOP1MTQ969P6 601 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 FAM167AQ96KS9 214 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 KIF2CQ99661 725 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 LRFN3Q9BTN0 628 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 DDX25Q9UHL0 483 aaKnown RBP9.98□□□□□ -0.81
CHD4-204ENST00000535810 INSL6Q9Y581 213 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 TRPV2Q9Y5S1 764 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 MUC6Q6W4X9 2439 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 KDM3AQ9Y4C1 1321 aa9.98□□□□□ -0.81
CHD4-204ENST00000535810 COL4A6Q14031 1691 aa9.97□□□□□ -0.81
CHD4-204ENST00000535810 FAM205CA6NFA0 338 aa9.97□□□□□ -0.81
CHD4-204ENST00000535810 M0QZ92 97 aa9.97□□□□□ -0.81
CHD4-204ENST00000535810 OATP04181 439 aa9.97□□□□□ -0.81
CHD4-204ENST00000535810 KRT2P35908 639 aa9.97□□□□□ -0.81
CHD4-204ENST00000535810 NR5A1Q13285 461 aa9.97□□□□□ -0.81
CHD4-204ENST00000535810 EARS2Q5JPH6 523 aaKnown RBP9.97□□□□□ -0.81
CHD4-204ENST00000535810 PPP4R3AQ6IN85 833 aa9.97□□□□□ -0.81
CHD4-204ENST00000535810 TRMT1LQ7Z2T5 733 aaKnown RBP9.97□□□□□ -0.81
CHD4-204ENST00000535810 NME8Q8N427 588 aa9.97□□□□□ -0.81
CHD4-204ENST00000535810 RDM1Q8NG50 284 aa9.97□□□□□ -0.81
CHD4-204ENST00000535810 LINC01599Q8WXQ3 324 aa9.97□□□□□ -0.81
CHD4-204ENST00000535810 YME1L1Q96TA2 773 aa9.97□□□□□ -0.81
CHD4-204ENST00000535810 CELF4Q9BZC1 486 aaKnown RBP9.97□□□□□ -0.81
CHD4-204ENST00000535810 KCNMB3Q9NPA1 279 aa9.97□□□□□ -0.81
CHD4-204ENST00000535810 MTUS1Q9ULD2 1270 aa9.97□□□□□ -0.81
CHD4-204ENST00000535810 CEP131Q9UPN4 1083 aa9.97□□□□□ -0.81
CHD4-204ENST00000535810 SQORQ9Y6N5 450 aa9.97□□□□□ -0.81
CHD4-204ENST00000535810 COL4A4P53420 1690 aaPredicted RBP9.96□□□□□ -0.81
CHD4-204ENST00000535810 WDR81Q562E7 1941 aa9.96□□□□□ -0.81
CHD4-204ENST00000535810 CCNT1O60563 726 aaKnown RBP9.96□□□□□ -0.82
CHD4-204ENST00000535810 LPXNO60711 386 aa9.96□□□□□ -0.82
CHD4-204ENST00000535810 UPP2O95045 317 aa9.96□□□□□ -0.82
CHD4-204ENST00000535810 MMP1P03956 469 aa9.96□□□□□ -0.82
CHD4-204ENST00000535810 BMP1P13497 986 aa9.96□□□□□ -0.82
CHD4-204ENST00000535810 GCFC2P16383 781 aaKnown RBP9.96□□□□□ -0.82
CHD4-204ENST00000535810 POU3F3P20264 500 aaPredicted RBP9.96□□□□□ -0.82
CHD4-204ENST00000535810 ERVK-21P61565 698 aa9.96□□□□□ -0.82
CHD4-204ENST00000535810 PAK2Q13177 524 aa9.96□□□□□ -0.82
CHD4-204ENST00000535810 GRB10Q13322 594 aa9.96□□□□□ -0.82
CHD4-204ENST00000535810 KRT40Q6A162 431 aa9.96□□□□□ -0.82
CHD4-204ENST00000535810 MIER3Q7Z3K6 550 aa9.96□□□□□ -0.82
CHD4-204ENST00000535810 GPIHBP1Q8IV16 184 aa9.96□□□□□ -0.82
CHD4-204ENST00000535810 METTL13Q8N6R0 699 aa9.96□□□□□ -0.82
CHD4-204ENST00000535810 GDPD5Q8WTR4 605 aa9.96□□□□□ -0.82
CHD4-204ENST00000535810 TMEM40Q8WWA1 233 aa9.96□□□□□ -0.82
CHD4-204ENST00000535810 TGS1Q96RS0 853 aaKnown RBP9.96□□□□□ -0.82
CHD4-204ENST00000535810 TMX1Q9H3N1 280 aa9.96□□□□□ -0.82
CHD4-204ENST00000535810 BRMS1Q9HCU9 246 aa9.96□□□□□ -0.82
CHD4-204ENST00000535810 VAV3Q9UKW4 847 aa9.96□□□□□ -0.82
CHD4-204ENST00000535810 PADI3Q9ULW8 664 aa9.96□□□□□ -0.82
CHD4-204ENST00000535810 LIMCH1Q9UPQ0 1083 aa9.96□□□□□ -0.82
CHD4-204ENST00000535810 GINS2Q9Y248 185 aa9.96□□□□□ -0.82
CHD4-204ENST00000535810 MTCH2Q9Y6C9 303 aa9.96□□□□□ -0.82
CHD4-204ENST00000535810 BRWD1Q9NSI6 2320 aa9.96□□□□□ -0.82
CHD4-204ENST00000535810 TTC3P53804 2025 aa9.95□□□□□ -0.82
CHD4-204ENST00000535810 ENPP3O14638 875 aa9.95□□□□□ -0.82
CHD4-204ENST00000535810 MAGEB2O15479 319 aa9.95□□□□□ -0.82
CHD4-204ENST00000535810 RBM25P49756 843 aaKnown RBP9.95□□□□□ -0.82
CHD4-204ENST00000535810 CLCN3P51790 818 aa9.95□□□□□ -0.82
CHD4-204ENST00000535810 FOSBP53539 338 aa9.95□□□□□ -0.82
CHD4-204ENST00000535810 PPP2R5CQ13362 524 aa9.95□□□□□ -0.82
CHD4-204ENST00000535810 CCDC85BQ15834 202 aaPredicted RBP9.95□□□□□ -0.82
CHD4-204ENST00000535810 AAK1Q2M2I8 961 aa9.95□□□□□ -0.82
CHD4-204ENST00000535810 KIZQ2M2Z5 673 aa9.95□□□□□ -0.82
CHD4-204ENST00000535810 TMEM266Q2M3C6 531 aa9.95□□□□□ -0.82
CHD4-204ENST00000535810 TMEM31Q5JXX7 168 aa9.95□□□□□ -0.82
CHD4-204ENST00000535810 ALYREFQ86V81 257 aaKnown RBP9.95□□□□□ -0.82
CHD4-204ENST00000535810 CCDC83Q8IWF9 413 aa9.95□□□□□ -0.82
CHD4-204ENST00000535810 DIS3L2Q8IYB7 885 aaKnown RBP9.95□□□□□ -0.82
CHD4-204ENST00000535810 MICALL1Q8N3F8 863 aa9.95□□□□□ -0.82
CHD4-204ENST00000535810 LINC01465Q8N7H1 131 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms