RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 MAGEF1Q9HAY2 307 aa17.33■□□□□ 0.37
CNN1-202ENST00000535659 PDLIM7Q9NR12 457 aa17.33■□□□□ 0.37
CNN1-202ENST00000535659 KBTBD4Q9NVX7 518 aa17.33■□□□□ 0.37
CNN1-202ENST00000535659 IGKV6-21A0A0C4DH24 114 aa17.32■□□□□ 0.36
CNN1-202ENST00000535659 MBLAC1A4D2B0 266 aaPredicted RBP17.32■□□□□ 0.36
CNN1-202ENST00000535659 TREHO43280 583 aa17.32■□□□□ 0.36
CNN1-202ENST00000535659 C22orf31O95567 290 aa17.32■□□□□ 0.36
CNN1-202ENST00000535659 CYP11B2P19099 503 aa17.32■□□□□ 0.36
CNN1-202ENST00000535659 POLGP54098 1239 aaPredicted RBP17.32■□□□□ 0.36
CNN1-202ENST00000535659 AMPD3Q01432 767 aa17.32■□□□□ 0.36
CNN1-202ENST00000535659 PRPF38BQ5VTL8 546 aaKnown RBP17.32■□□□□ 0.36
CNN1-202ENST00000535659 RETREG2Q8NC44 543 aa17.32■□□□□ 0.36
CNN1-202ENST00000535659 JPH2Q9BR39 696 aaPredicted RBP17.32■□□□□ 0.36
CNN1-202ENST00000535659 LRRC27Q9C0I9 530 aa17.32■□□□□ 0.36
CNN1-202ENST00000535659 TNMDQ9H2S6 317 aa17.32■□□□□ 0.36
CNN1-202ENST00000535659 SUGCTQ9HAC7 445 aa17.32■□□□□ 0.36
CNN1-202ENST00000535659 BMP2KQ9NSY1 1161 aaPredicted RBP17.32■□□□□ 0.36
CNN1-202ENST00000535659 DACT1Q9NYF0 836 aa17.32■□□□□ 0.36
CNN1-202ENST00000535659 KCND2Q9NZV8 630 aa17.32■□□□□ 0.36
CNN1-202ENST00000535659 TUBE1Q9UJT0 475 aa17.32■□□□□ 0.36
CNN1-202ENST00000535659 PCDHA2Q9Y5H9 948 aa17.32■□□□□ 0.36
CNN1-202ENST00000535659 PTMSP20962 102 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 SNX17Q15036 470 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 PTGISQ16647 500 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 ARSHQ5FYA8 562 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 EFCAB12Q6NXP0 572 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 KANK3Q6NY19 840 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 GPBP1Q86WP2 473 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 STAMQ92783 540 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 ZBTB10Q96DT7 871 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 PAGE5Q96GU1 130 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 MYMKA6NI61 221 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 USO1O60763 962 aaKnown RBP17.31■□□□□ 0.36
CNN1-202ENST00000535659 KINO60870 393 aaKnown RBP17.31■□□□□ 0.36
CNN1-202ENST00000535659 AFMP43652 599 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 DNM2P50570 870 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 EMC2Q15006 297 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 ANKRD33Q7Z3H0 272 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 METTL13Q8N6R0 699 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 GPT2Q8TD30 523 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 CCDC34Q96HJ3 373 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 TOX2Q96NM4 488 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 MTRQ99707 1265 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 RUSC1Q9BVN2 902 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 TRPV6Q9H1D0 765 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 ATP6V0A4Q9HBG4 840 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 TRMT13Q9NUP7 481 aaKnown RBP17.31■□□□□ 0.36
CNN1-202ENST00000535659 MROH7Q68CQ1 1323 aa17.31■□□□□ 0.36
CNN1-202ENST00000535659 SMIM35A0A1B0GVV1 85 aa17.3■□□□□ 0.36
CNN1-202ENST00000535659 CYP2C9P11712 490 aa17.3■□□□□ 0.36
CNN1-202ENST00000535659 GUCY2CP25092 1073 aa17.3■□□□□ 0.36
CNN1-202ENST00000535659 TMOD1P28289 359 aa17.3■□□□□ 0.36
CNN1-202ENST00000535659 IER5Q5VY09 327 aa17.3■□□□□ 0.36
CNN1-202ENST00000535659 MAEAQ7L5Y9 396 aa17.3■□□□□ 0.36
CNN1-202ENST00000535659 SH3RF1Q7Z6J0 888 aa17.3■□□□□ 0.36
CNN1-202ENST00000535659 FAM126BQ8IXS8 530 aa17.3■□□□□ 0.36
CNN1-202ENST00000535659 ELOA2Q8IYF1 753 aaPredicted RBP17.3■□□□□ 0.36
CNN1-202ENST00000535659 MCPH1Q8NEM0 835 aa17.3■□□□□ 0.36
CNN1-202ENST00000535659 TIPINQ9BVW5 301 aa17.3■□□□□ 0.36
CNN1-202ENST00000535659 XPNPEP1Q9NQW7 623 aa17.3■□□□□ 0.36
CNN1-202ENST00000535659 NOD1Q9Y239 953 aa17.3■□□□□ 0.36
CNN1-202ENST00000535659 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.29■□□□□ 0.36
CNN1-202ENST00000535659 NPHP3-ACAD11A0A0J9YXS1 232 aa17.29■□□□□ 0.36
CNN1-202ENST00000535659 DCDC2CA8MYV0 355 aa17.29■□□□□ 0.36
CNN1-202ENST00000535659 GAS2O43903 313 aaKnown RBP17.29■□□□□ 0.36
CNN1-202ENST00000535659 B4GALT4O60513 344 aa17.29■□□□□ 0.36
CNN1-202ENST00000535659 MBD3O95983 291 aa17.29■□□□□ 0.36
CNN1-202ENST00000535659 CD4P01730 458 aa17.29■□□□□ 0.36
CNN1-202ENST00000535659 KRT18P05783 430 aaKnown RBP17.29■□□□□ 0.36
CNN1-202ENST00000535659 MDM2Q00987 491 aaPredicted RBP17.29■□□□□ 0.36
CNN1-202ENST00000535659 TLE2Q04725 743 aa17.29■□□□□ 0.36
CNN1-202ENST00000535659 PTK7Q13308 1070 aa17.29■□□□□ 0.36
CNN1-202ENST00000535659 MKRN4PQ13434 485 aaPredicted RBP17.29■□□□□ 0.36
CNN1-202ENST00000535659 GIT2Q14161 759 aa17.29■□□□□ 0.36
CNN1-202ENST00000535659 FAM102BQ5T8I3 360 aa17.29■□□□□ 0.36
CNN1-202ENST00000535659 TAF2Q6P1X5 1199 aa17.29■□□□□ 0.36
CNN1-202ENST00000535659 SERINC5Q86VE9 423 aa17.29■□□□□ 0.36
CNN1-202ENST00000535659 KIAA0319LQ8IZA0 1049 aa17.29■□□□□ 0.36
CNN1-202ENST00000535659 LRRC71Q8N4P6 559 aa17.29■□□□□ 0.36
CNN1-202ENST00000535659 LINC01465Q8N7H1 131 aa17.29■□□□□ 0.36
CNN1-202ENST00000535659 TCP11Q8WWU5 503 aa17.29■□□□□ 0.36
CNN1-202ENST00000535659 DDX12PQ92771 950 aa17.29■□□□□ 0.36
CNN1-202ENST00000535659 TMEM143Q96AN5 459 aa17.29■□□□□ 0.36
CNN1-202ENST00000535659 CTAGE1Q96RT6 745 aa17.29■□□□□ 0.36
CNN1-202ENST00000535659 C7orf25Q9BPX7 421 aa17.29■□□□□ 0.36
CNN1-202ENST00000535659 POLD4Q9HCU8 107 aa17.29■□□□□ 0.36
CNN1-202ENST00000535659 MKI67P46013 3256 aaKnown RBP17.29■□□□□ 0.36
CNN1-202ENST00000535659 TLR3O15455 904 aaKnown RBP17.28■□□□□ 0.36
CNN1-202ENST00000535659 PQBP1O60828 265 aaKnown RBP17.28■□□□□ 0.36
CNN1-202ENST00000535659 RTP1P59025 263 aa17.28■□□□□ 0.36
CNN1-202ENST00000535659 RAD51AP2Q09MP3 1159 aa17.28■□□□□ 0.36
CNN1-202ENST00000535659 NFKBIBQ15653 356 aa17.28■□□□□ 0.36
CNN1-202ENST00000535659 LRRC26Q2I0M4 334 aa17.28■□□□□ 0.36
CNN1-202ENST00000535659 TRIM60Q495X7 471 aa17.28■□□□□ 0.36
CNN1-202ENST00000535659 RUFY4Q6ZNE9 571 aa17.28■□□□□ 0.36
CNN1-202ENST00000535659 DYMQ7RTS9 669 aa17.28■□□□□ 0.36
CNN1-202ENST00000535659 GRAMD1CQ8IYS0 662 aa17.28■□□□□ 0.36
CNN1-202ENST00000535659 NME8Q8N427 588 aa17.28■□□□□ 0.36
CNN1-202ENST00000535659 TRIM9Q9C026 710 aa17.28■□□□□ 0.36
CNN1-202ENST00000535659 SUCLA2Q9P2R7 463 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms