RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 HOXD8P13378 290 aaPredicted RBP25.36■■□□□ 1.65
RBFOX1-206ENST00000535565 POLGP54098 1239 aaPredicted RBP25.36■■□□□ 1.65
RBFOX1-206ENST00000535565 MYOCDQ8IZQ8 938 aa25.36■■□□□ 1.65
RBFOX1-206ENST00000535565 POLD4Q9HCU8 107 aa25.36■■□□□ 1.65
RBFOX1-206ENST00000535565 TRPC6Q9Y210 931 aa25.36■■□□□ 1.65
RBFOX1-206ENST00000535565 BICDL2A1A5D9 508 aa25.35■■□□□ 1.65
RBFOX1-206ENST00000535565 SFI1A8K8P3 1242 aa25.35■■□□□ 1.65
RBFOX1-206ENST00000535565 ADCY3O60266 1144 aa25.35■■□□□ 1.65
RBFOX1-206ENST00000535565 RFC5P40937 340 aa25.35■■□□□ 1.65
RBFOX1-206ENST00000535565 CPT1AP50416 773 aa25.35■■□□□ 1.65
RBFOX1-206ENST00000535565 PRMT2P55345 433 aa25.35■■□□□ 1.65
RBFOX1-206ENST00000535565 STX17P56962 302 aa25.35■■□□□ 1.65
RBFOX1-206ENST00000535565 MAPK7Q13164 816 aa25.35■■□□□ 1.65
RBFOX1-206ENST00000535565 NCAPHQ15003 741 aa25.35■■□□□ 1.65
RBFOX1-206ENST00000535565 PLCB4Q15147 1175 aa25.35■■□□□ 1.65
RBFOX1-206ENST00000535565 ODR4Q5SWX8 454 aa25.35■■□□□ 1.65
RBFOX1-206ENST00000535565 FAM102BQ5T8I3 360 aa25.35■■□□□ 1.65
RBFOX1-206ENST00000535565 SLC7A3Q8WY07 619 aa25.35■■□□□ 1.65
RBFOX1-206ENST00000535565 KIFAP3Q92845 792 aa25.35■■□□□ 1.65
RBFOX1-206ENST00000535565 A6NJR5 290 aa25.35■■□□□ 1.65
RBFOX1-206ENST00000535565 HBP1O60381 514 aa25.35■■□□□ 1.65
RBFOX1-206ENST00000535565 TPD52L1Q16890 204 aaPredicted RBP25.35■■□□□ 1.65
RBFOX1-206ENST00000535565 SPATA1Q5VX52 437 aa25.35■■□□□ 1.65
RBFOX1-206ENST00000535565 STXBP4Q6ZWJ1 553 aa25.35■■□□□ 1.65
RBFOX1-206ENST00000535565 FAM178BQ8IXR5 827 aa25.35■■□□□ 1.65
RBFOX1-206ENST00000535565 EXOC8Q8IYI6 725 aa25.35■■□□□ 1.65
RBFOX1-206ENST00000535565 DAW1Q8N136 415 aa25.35■■□□□ 1.65
RBFOX1-206ENST00000535565 TRPV1Q8NER1 839 aa25.35■■□□□ 1.65
RBFOX1-206ENST00000535565 DUSP11O75319 330 aaKnown RBP25.34■■□□□ 1.65
RBFOX1-206ENST00000535565 HMGCRP04035 888 aa25.34■■□□□ 1.65
RBFOX1-206ENST00000535565 ZNF286BP0CG31 522 aa25.34■■□□□ 1.65
RBFOX1-206ENST00000535565 ELNP15502 786 aa25.34■■□□□ 1.65
RBFOX1-206ENST00000535565 CCNE1P24864 410 aa25.34■■□□□ 1.65
RBFOX1-206ENST00000535565 CACNB2Q08289 660 aaPredicted RBP25.34■■□□□ 1.65
RBFOX1-206ENST00000535565 EMC2Q15006 297 aa25.34■■□□□ 1.65
RBFOX1-206ENST00000535565 LRRC41Q15345 812 aa25.34■■□□□ 1.65
RBFOX1-206ENST00000535565 TARBP2Q15633 366 aaKnown RBP25.34■■□□□ 1.65
RBFOX1-206ENST00000535565 P2RX5Q93086 422 aa25.34■■□□□ 1.65
RBFOX1-206ENST00000535565 LENG1Q96BZ8 264 aaPredicted RBP25.34■■□□□ 1.65
RBFOX1-206ENST00000535565 DHX33Q9H6R0 707 aaKnown RBP25.34■■□□□ 1.65
RBFOX1-206ENST00000535565 NFE2L3Q9Y4A8 694 aa25.34■■□□□ 1.65
RBFOX1-206ENST00000535565 GCNT3O95395 438 aa25.33■■□□□ 1.65
RBFOX1-206ENST00000535565 PLS3P13797 630 aa25.33■■□□□ 1.65
RBFOX1-206ENST00000535565 CNGA1P29973 690 aa25.33■■□□□ 1.65
RBFOX1-206ENST00000535565 PLCB2Q00722 1185 aa25.33■■□□□ 1.65
RBFOX1-206ENST00000535565 PXYLP1Q8TE99 480 aa25.33■■□□□ 1.65
RBFOX1-206ENST00000535565 C16orf70Q9BSU1 422 aa25.33■■□□□ 1.65
RBFOX1-206ENST00000535565 C17orf75Q9HAS0 396 aa25.33■■□□□ 1.65
RBFOX1-206ENST00000535565 PDLIM7Q9NR12 457 aa25.33■■□□□ 1.65
RBFOX1-206ENST00000535565 H3BRB1 525 aa25.32■■□□□ 1.64
RBFOX1-206ENST00000535565 SEPT4O43236 478 aa25.32■■□□□ 1.64
RBFOX1-206ENST00000535565 SLC17A8Q8NDX2 589 aa25.32■■□□□ 1.64
RBFOX1-206ENST00000535565 GLIS3Q8NEA6 775 aa25.32■■□□□ 1.64
RBFOX1-206ENST00000535565 MED15Q96RN5 788 aa25.32■■□□□ 1.64
RBFOX1-206ENST00000535565 FGFBP2Q9BYJ0 223 aa25.32■■□□□ 1.64
RBFOX1-206ENST00000535565 TUT1Q9H6E5 874 aaKnown RBP25.32■■□□□ 1.64
RBFOX1-206ENST00000535565 EIF3DO15371 548 aaKnown RBP eCLIP25.31■■□□□ 1.64
RBFOX1-206ENST00000535565 MAPTP10636 758 aaKnown RBP25.31■■□□□ 1.64
RBFOX1-206ENST00000535565 PRKAR2AP13861 404 aaKnown RBP25.31■■□□□ 1.64
RBFOX1-206ENST00000535565 TBC1D8BQ0IIM8 1120 aa25.31■■□□□ 1.64
RBFOX1-206ENST00000535565 TRIM32Q13049 653 aa25.31■■□□□ 1.64
RBFOX1-206ENST00000535565 CEP89Q96ST8 783 aa25.31■■□□□ 1.64
RBFOX1-206ENST00000535565 JPH2Q9BR39 696 aaPredicted RBP25.31■■□□□ 1.64
RBFOX1-206ENST00000535565 GPRC5CQ9NQ84 441 aa25.31■■□□□ 1.64
RBFOX1-206ENST00000535565 XPNPEP1Q9NQW7 623 aa25.31■■□□□ 1.64
RBFOX1-206ENST00000535565 FANCLQ9NW38 375 aa25.31■■□□□ 1.64
RBFOX1-206ENST00000535565 UBE4BO95155 1302 aa25.31■■□□□ 1.64
RBFOX1-206ENST00000535565 GAS2O43903 313 aaKnown RBP25.31■■□□□ 1.64
RBFOX1-206ENST00000535565 RTP1P59025 263 aa25.31■■□□□ 1.64
RBFOX1-206ENST00000535565 DMP1Q13316 513 aaPredicted RBP25.31■■□□□ 1.64
RBFOX1-206ENST00000535565 ALCAMQ13740 583 aa25.31■■□□□ 1.64
RBFOX1-206ENST00000535565 ZNF484Q5JVG2 852 aa25.31■■□□□ 1.64
RBFOX1-206ENST00000535565 CENPPQ6IPU0 288 aa25.31■■□□□ 1.64
RBFOX1-206ENST00000535565 EPM2AIP1Q7L775 607 aaPredicted RBP25.31■■□□□ 1.64
RBFOX1-206ENST00000535565 SCFD1Q8WVM8 642 aa25.31■■□□□ 1.64
RBFOX1-206ENST00000535565 TSG101Q99816 390 aa25.31■■□□□ 1.64
RBFOX1-206ENST00000535565 SPC25Q9HBM1 224 aa25.31■■□□□ 1.64
RBFOX1-206ENST00000535565 KCNG1Q9UIX4 513 aa25.31■■□□□ 1.64
RBFOX1-206ENST00000535565 TSKSQ9UJT2 592 aa25.31■■□□□ 1.64
RBFOX1-206ENST00000535565 KAT6AQ92794 2004 aa25.3■■□□□ 1.64
RBFOX1-206ENST00000535565 MAFO75444 373 aaPredicted RBP25.3■■□□□ 1.64
RBFOX1-206ENST00000535565 MYBP10242 640 aa25.3■■□□□ 1.64
RBFOX1-206ENST00000535565 RARBP10826 455 aa25.3■■□□□ 1.64
RBFOX1-206ENST00000535565 CASP5P51878 434 aa25.3■■□□□ 1.64
RBFOX1-206ENST00000535565 SMTNP53814 917 aa25.3■■□□□ 1.64
RBFOX1-206ENST00000535565 LRRC63Q05C16 580 aa25.3■■□□□ 1.64
RBFOX1-206ENST00000535565 ZNF720Q7Z2F6 126 aa25.3■■□□□ 1.64
RBFOX1-206ENST00000535565 SLAIN1Q8ND83 568 aa25.3■■□□□ 1.64
RBFOX1-206ENST00000535565 IFT74Q96LB3 600 aa25.3■■□□□ 1.64
RBFOX1-206ENST00000535565 POLR3FQ9H1D9 316 aaPredicted RBP25.3■■□□□ 1.64
RBFOX1-206ENST00000535565 RNPEPQ9H4A4 650 aa25.3■■□□□ 1.64
RBFOX1-206ENST00000535565 PCDHB13Q9Y5F0 798 aa25.3■■□□□ 1.64
RBFOX1-206ENST00000535565 COL1A2P08123 1366 aa25.3■■□□□ 1.64
RBFOX1-206ENST00000535565 TRIM49BA6NDI0 452 aa25.29■■□□□ 1.64
RBFOX1-206ENST00000535565 K7ENM7 598 aa25.29■■□□□ 1.64
RBFOX1-206ENST00000535565 NMT1P30419 496 aaKnown RBP25.29■■□□□ 1.64
RBFOX1-206ENST00000535565 PEX3P56589 373 aa25.29■■□□□ 1.64
RBFOX1-206ENST00000535565 FSCN1Q16658 493 aaKnown RBP25.29■■□□□ 1.64
RBFOX1-206ENST00000535565 BMT2Q1RMZ1 405 aa25.29■■□□□ 1.64
RBFOX1-206ENST00000535565 TTI2Q6NXR4 508 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms