RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 ZNF287Q9HBT7 754 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 SIX2Q9NPC8 291 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 ESYT2A0FGR8 921 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 GCNT3O95395 438 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 MARCKSL1P49006 195 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 SLC12A3P55017 1021 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 PPP4CP60510 307 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 GIT2Q14161 759 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 EPHA7Q15375 998 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 KNOP1Q1ED39 458 aaKnown RBP14.56□□□□□ -0.08
HDAC4-214ENST00000535493 ZC2HC1CQ53FD0 456 aaPredicted RBP14.56□□□□□ -0.08
HDAC4-214ENST00000535493 MFSD14BQ5SR56 506 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 C1orf131Q8NDD1 294 aaKnown RBP14.56□□□□□ -0.08
HDAC4-214ENST00000535493 CYP2W1Q8TAV3 490 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 EPS8L3Q8TE67 593 aaKnown RBP14.56□□□□□ -0.08
HDAC4-214ENST00000535493 CUL5Q93034 780 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 P2RX7Q99572 595 aaKnown RBP14.56□□□□□ -0.08
HDAC4-214ENST00000535493 AMFRQ9UKV5 643 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 STXBP5LQ9Y2K9 1186 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 PTPN22Q9Y2R2 807 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 IRS2Q9Y4H2 1338 aa14.55□□□□□ -0.08
HDAC4-214ENST00000535493 TRIM37O94972 964 aa14.55□□□□□ -0.08
HDAC4-214ENST00000535493 RHBDL3P58872 404 aa14.55□□□□□ -0.08
HDAC4-214ENST00000535493 DR1Q01658 176 aa14.55□□□□□ -0.08
HDAC4-214ENST00000535493 ADCY1Q08828 1119 aa14.55□□□□□ -0.08
HDAC4-214ENST00000535493 MSL1Q68DK7 614 aa14.55□□□□□ -0.08
HDAC4-214ENST00000535493 CCDC25Q86WR0 208 aa14.55□□□□□ -0.08
HDAC4-214ENST00000535493 CPNE8Q86YQ8 564 aa14.55□□□□□ -0.08
HDAC4-214ENST00000535493 PIGOQ8TEQ8 1089 aa14.55□□□□□ -0.08
HDAC4-214ENST00000535493 SLC35C1Q96A29 364 aa14.55□□□□□ -0.08
HDAC4-214ENST00000535493 THAP2Q9H0W7 228 aa14.55□□□□□ -0.08
HDAC4-214ENST00000535493 PLCG2P16885 1265 aa14.55□□□□□ -0.08
HDAC4-214ENST00000535493 MARSP56192 900 aaKnown RBP14.55□□□□□ -0.08
HDAC4-214ENST00000535493 POU5F1Q01860 360 aaKnown RBP14.55□□□□□ -0.08
HDAC4-214ENST00000535493 SLC10A5Q5PT55 438 aa14.55□□□□□ -0.08
HDAC4-214ENST00000535493 ERMARDQ5T6L9 678 aa14.55□□□□□ -0.08
HDAC4-214ENST00000535493 TPTE2Q6XPS3 522 aa14.55□□□□□ -0.08
HDAC4-214ENST00000535493 HES6Q96HZ4 224 aa14.55□□□□□ -0.08
HDAC4-214ENST00000535493 CALR3Q96L12 384 aaKnown RBP14.55□□□□□ -0.08
HDAC4-214ENST00000535493 BHMT2Q9H2M3 363 aa14.55□□□□□ -0.08
HDAC4-214ENST00000535493 ACTR5Q9H9F9 607 aaPredicted RBP14.55□□□□□ -0.08
HDAC4-214ENST00000535493 PNMA6FA0A0J9YX94 578 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 GNPATO15228 680 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 NR3C1P04150 777 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 TRIM49P0CI25 452 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 TRIM49CP0CI26 452 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 CREB1P16220 341 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 PDE6BP35913 854 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 GSTO1P78417 241 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 ELF3P78545 371 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-214ENST00000535493 MTMR3Q13615 1198 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 IFI16Q16666 785 aaKnown RBP14.54□□□□□ -0.08
HDAC4-214ENST00000535493 AGBL2Q5U5Z8 902 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 TAX1BP1Q86VP1 789 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 THOC1Q96FV9 657 aaKnown RBP14.54□□□□□ -0.08
HDAC4-214ENST00000535493 MXD3Q9BW11 206 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 NT5C3AQ9H0P0 336 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 ADAM7Q9H2U9 754 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 ABCF3Q9NUQ8 709 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 DNAJC17Q9NVM6 304 aaKnown RBP14.54□□□□□ -0.08
HDAC4-214ENST00000535493 RGL1Q9NZL6 768 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 DOT1LQ8TEK3 1739 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 RREB1Q92766 1687 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 EIF4E1BA6NMX2 242 aaKnown RBP14.54□□□□□ -0.08
HDAC4-214ENST00000535493 CCDC188H7C350 402 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 NMT1P30419 496 aaKnown RBP14.54□□□□□ -0.08
HDAC4-214ENST00000535493 PLCB4Q15147 1175 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 KRT35Q92764 455 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 STAMBPL1Q96FJ0 436 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 A1CFQ9NQ94 594 aaKnown RBP14.54□□□□□ -0.08
HDAC4-214ENST00000535493 SUCLA2Q9P2R7 463 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-214ENST00000535493 COG5Q9UP83 839 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 DAAM1Q9Y4D1 1078 aa14.54□□□□□ -0.08
HDAC4-214ENST00000535493 COL22A1Q8NFW1 1626 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-214ENST00000535493 UFL1O94874 794 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 LDHCP07864 332 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 PAX7P23759 505 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 KCNJ1P48048 391 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 PMS2P54278 862 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 PLS1Q14651 629 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 USH1GQ495M9 461 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 ZNF746Q6NUN9 644 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-214ENST00000535493 SLFN11Q7Z7L1 901 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 RASGEF1CQ8N431 466 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 CCDC197Q8NCU1 140 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 ZNF317Q96PQ6 595 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-214ENST00000535493 POP1Q99575 1024 aaKnown RBP14.53□□□□□ -0.08
HDAC4-214ENST00000535493 RUSC1Q9BVN2 902 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 DDX4Q9NQI0 724 aaKnown RBP14.53□□□□□ -0.08
HDAC4-214ENST00000535493 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.53□□□□□ -0.081e-6■■■■□ 26.1
HDAC4-214ENST00000535493 AGAP1Q9UPQ3 857 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 TCRBV7S2A1N4TA0A589 114 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 C5orf60A6NFR6 353 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 CCT8L1PA6NM43 557 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 DDX3YO15523 660 aaKnown RBP14.53□□□□□ -0.08
HDAC4-214ENST00000535493 CLK2P49760 499 aaKnown RBP14.53□□□□□ -0.08
HDAC4-214ENST00000535493 MRPL12P52815 198 aaKnown RBP14.53□□□□□ -0.08
HDAC4-214ENST00000535493 ZNF543Q08ER8 600 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 DRAP1Q14919 205 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-214ENST00000535493 WLSQ5T9L3 541 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms