RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 POF1BQ8WVV4 589 aa14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 NLRP7Q8WX94 980 aa14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 JPH2Q9BR39 696 aaPredicted RBP14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 INO80BQ9C086 356 aaPredicted RBP14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 SLKQ9H2G2 1235 aaPredicted RBP14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 TLE6Q9H808 572 aa14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 RGS18Q9NS28 235 aa14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 TMEM161AQ9NX61 479 aa14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 VPS54Q9P1Q0 977 aa14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 NOC2LQ9Y3T9 749 aaKnown RBP14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 VCANP13611 3396 aa14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 IGLV3-22A0A075B6J6 115 aa14.93□□□□□ -0.02
CLSTN3-205ENST00000535452 PRR33A8MZF0 331 aa14.93□□□□□ -0.02
CLSTN3-205ENST00000535452 VTNP04004 478 aa14.93□□□□□ -0.02
CLSTN3-205ENST00000535452 CIITAP33076 1130 aa14.93□□□□□ -0.02
CLSTN3-205ENST00000535452 CA8P35219 290 aa14.93□□□□□ -0.02
CLSTN3-205ENST00000535452 NLRP11P59045 1033 aaKnown RBP14.93□□□□□ -0.02
CLSTN3-205ENST00000535452 EXOC8Q8IYI6 725 aa14.93□□□□□ -0.02
CLSTN3-205ENST00000535452 RNF169Q8NCN4 708 aa14.93□□□□□ -0.02
CLSTN3-205ENST00000535452 RDM1Q8NG50 284 aa14.93□□□□□ -0.02
CLSTN3-205ENST00000535452 CDCA3Q99618 268 aaPredicted RBP14.93□□□□□ -0.02
CLSTN3-205ENST00000535452 NAP1L4Q99733 375 aaKnown RBP14.93□□□□□ -0.02
CLSTN3-205ENST00000535452 ELAC1Q9H777 363 aaKnown RBP14.93□□□□□ -0.02
CLSTN3-205ENST00000535452 RC3H2Q9HBD1 1191 aaKnown RBP14.93□□□□□ -0.02
CLSTN3-205ENST00000535452 ERVK-5Q9HDB9 667 aa14.93□□□□□ -0.02
CLSTN3-205ENST00000535452 TLR9Q9NR96 1032 aa14.93□□□□□ -0.02
CLSTN3-205ENST00000535452 FAM217BQ9NTX9 383 aaPredicted RBP14.93□□□□□ -0.02
CLSTN3-205ENST00000535452 SEPT9Q9UHD8 586 aaPredicted RBP14.93□□□□□ -0.02
CLSTN3-205ENST00000535452 PCDHA4Q9UN74 947 aa14.93□□□□□ -0.02
CLSTN3-205ENST00000535452 ARIH1Q9Y4X5 557 aaPredicted RBP14.93□□□□□ -0.02
CLSTN3-205ENST00000535452 NLRC5Q86WI3 1866 aa14.93□□□□□ -0.02
CLSTN3-205ENST00000535452 CCDC194A0A1B0GVG4 234 aa14.92□□□□□ -0.02
CLSTN3-205ENST00000535452 C22orf31O95567 290 aa14.92□□□□□ -0.02
CLSTN3-205ENST00000535452 SKIP12755 728 aa14.92□□□□□ -0.02
CLSTN3-205ENST00000535452 NRIP1P48552 1158 aa14.92□□□□□ -0.02
CLSTN3-205ENST00000535452 PRKCEQ02156 737 aa14.92□□□□□ -0.02
CLSTN3-205ENST00000535452 HYAL1Q12794 435 aa14.92□□□□□ -0.02
CLSTN3-205ENST00000535452 COL9A3Q14050 684 aaPredicted RBP14.92□□□□□ -0.02
CLSTN3-205ENST00000535452 LRRC43Q8N309 656 aa14.92□□□□□ -0.02
CLSTN3-205ENST00000535452 RASGRP4Q8TDF6 673 aa14.92□□□□□ -0.02
CLSTN3-205ENST00000535452 RSPH1Q8WYR4 309 aa14.92□□□□□ -0.02
CLSTN3-205ENST00000535452 KCNB2Q92953 911 aa14.92□□□□□ -0.02
CLSTN3-205ENST00000535452 MRPL9Q9BYD2 267 aaKnown RBP14.92□□□□□ -0.02
CLSTN3-205ENST00000535452 GCOM2Q9BZD3 368 aaPredicted RBP14.92□□□□□ -0.02
CLSTN3-205ENST00000535452 BRMS1Q9HCU9 246 aa14.92□□□□□ -0.02
CLSTN3-205ENST00000535452 ENTPD7Q9NQZ7 604 aa14.92□□□□□ -0.02
CLSTN3-205ENST00000535452 NID2Q14112 1375 aa14.92□□□□□ -0.02
CLSTN3-205ENST00000535452 FAM86C2PA6NEL3 165 aa14.91□□□□□ -0.02
CLSTN3-205ENST00000535452 DHX15O43143 795 aaKnown RBP14.91□□□□□ -0.02
CLSTN3-205ENST00000535452 ITGB1P05556 798 aa14.91□□□□□ -0.02
CLSTN3-205ENST00000535452 SFPQP23246 707 aaKnown RBP eCLIP14.91□□□□□ -0.02
CLSTN3-205ENST00000535452 EIF4BP23588 611 aaKnown RBP14.91□□□□□ -0.02
CLSTN3-205ENST00000535452 PDIA3P30101 505 aaKnown RBP14.91□□□□□ -0.02
CLSTN3-205ENST00000535452 CLCN3P51790 818 aa14.91□□□□□ -0.02
CLSTN3-205ENST00000535452 NONOQ15233 471 aaKnown RBP eCLIP14.91□□□□□ -0.02
CLSTN3-205ENST00000535452 SMAD2Q15796 467 aaKnown RBP14.91□□□□□ -0.02
CLSTN3-205ENST00000535452 KRT25Q7Z3Z0 450 aa14.91□□□□□ -0.02
CLSTN3-205ENST00000535452 RBM23Q86U06 439 aaKnown RBP14.91□□□□□ -0.02
CLSTN3-205ENST00000535452 SKAP1Q86WV1 359 aa14.91□□□□□ -0.02
CLSTN3-205ENST00000535452 EFHBQ8N7U6 833 aa14.91□□□□□ -0.02
CLSTN3-205ENST00000535452 SPPL3Q8TCT6 385 aa14.91□□□□□ -0.02
CLSTN3-205ENST00000535452 TBCKQ8TEA7 893 aa14.91□□□□□ -0.02
CLSTN3-205ENST00000535452 LINC01599Q8WXQ3 324 aa14.91□□□□□ -0.02
CLSTN3-205ENST00000535452 WASF1Q92558 559 aa14.91□□□□□ -0.02
CLSTN3-205ENST00000535452 TMEM117Q9H0C3 514 aa14.91□□□□□ -0.02
CLSTN3-205ENST00000535452 CHD7Q9P2D1 2997 aa14.91□□□□□ -0.02
CLSTN3-205ENST00000535452 MBTPS2O43462 519 aa14.9□□□□□ -0.02
CLSTN3-205ENST00000535452 FGF18O76093 207 aa14.9□□□□□ -0.02
CLSTN3-205ENST00000535452 ZP2Q05996 745 aa14.9□□□□□ -0.02
CLSTN3-205ENST00000535452 PKN1Q16512 942 aa14.9□□□□□ -0.02
CLSTN3-205ENST00000535452 XKR3Q5GH77 459 aa14.9□□□□□ -0.02
CLSTN3-205ENST00000535452 RTN4RL1Q86UN2 441 aaPredicted RBP14.9□□□□□ -0.02
CLSTN3-205ENST00000535452 BLIDQ8IZY5 108 aa14.9□□□□□ -0.02
CLSTN3-205ENST00000535452 ZNF274Q96GC6 653 aaPredicted RBP14.9□□□□□ -0.02
CLSTN3-205ENST00000535452 CCDC43Q96MW1 224 aaKnown RBP14.9□□□□□ -0.02
CLSTN3-205ENST00000535452 ZNF558Q96NG5 402 aa14.9□□□□□ -0.02
CLSTN3-205ENST00000535452 AGXT2Q9BYV1 514 aa14.9□□□□□ -0.02
CLSTN3-205ENST00000535452 TMX1Q9H3N1 280 aa14.9□□□□□ -0.02
CLSTN3-205ENST00000535452 NGRNQ9NPE2 291 aaKnown RBP14.9□□□□□ -0.02
CLSTN3-205ENST00000535452 PDRG1Q9NUG6 133 aa14.9□□□□□ -0.02
CLSTN3-205ENST00000535452 NCOR1O75376 2440 aa14.9□□□□□ -0.02
CLSTN3-205ENST00000535452 SPDYE4A6NLX3 237 aa14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 C9IYK1 514 aa14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 MSH4O15457 936 aa14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 BAG4O95429 457 aaKnown RBP14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 ALDH7A1P49419 539 aaKnown RBP14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 NCBP1Q09161 790 aaKnown RBP14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 STK3Q13188 491 aa14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 ADAM15Q13444 863 aa14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 COL19A1Q14993 1142 aa14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 ANKRD1Q15327 319 aa14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 CTC1Q2NKJ3 1217 aa14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 MTERF2Q49AM1 385 aa14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 Q4G0T1 1027 aa14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 TMC7Q7Z402 723 aa14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 ZBTB33Q86T24 672 aa14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 FAM228AQ86W67 206 aa14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 LRRC71Q8N4P6 559 aa14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 CRYGNQ8WXF5 182 aa14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 SLC7A3Q8WY07 619 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms