RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 CA8P35219 290 aa12.4□□□□□ -0.42
VAMP1-204ENST00000535180 PTPN14Q15678 1187 aa12.4□□□□□ -0.42
VAMP1-204ENST00000535180 LRSAM1Q6UWE0 723 aa12.4□□□□□ -0.42
VAMP1-204ENST00000535180 SLC39A11Q8N1S5 342 aa12.4□□□□□ -0.42
VAMP1-204ENST00000535180 SAMD3Q8N6K7 520 aa12.4□□□□□ -0.42
VAMP1-204ENST00000535180 TMEM87AQ8NBN3 555 aa12.4□□□□□ -0.42
VAMP1-204ENST00000535180 TMEM117Q9H0C3 514 aa12.4□□□□□ -0.42
VAMP1-204ENST00000535180 ELAC1Q9H777 363 aaKnown RBP12.4□□□□□ -0.42
VAMP1-204ENST00000535180 SLC2A4RGQ9NR83 387 aa12.4□□□□□ -0.42
VAMP1-204ENST00000535180 TOMM22Q9NS69 142 aa12.4□□□□□ -0.42
VAMP1-204ENST00000535180 ERAP1Q9NZ08 941 aa12.4□□□□□ -0.42
VAMP1-204ENST00000535180 EPS15L1Q9UBC2 864 aa12.4□□□□□ -0.42
VAMP1-204ENST00000535180 GREB1Q4ZG55 1949 aa12.4□□□□□ -0.42
VAMP1-204ENST00000535180 MAST4O15021 2626 aa12.4□□□□□ -0.43
VAMP1-204ENST00000535180 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-204ENST00000535180 RRN3P2A6NIE6 340 aa12.39□□□□□ -0.43
VAMP1-204ENST00000535180 FOXP2O15409 715 aa12.39□□□□□ -0.43
VAMP1-204ENST00000535180 HMMRO75330 724 aa12.39□□□□□ -0.43
VAMP1-204ENST00000535180 STAM2O75886 525 aa12.39□□□□□ -0.43
VAMP1-204ENST00000535180 KCNA4P22459 653 aa12.39□□□□□ -0.43
VAMP1-204ENST00000535180 HOXA13P31271 388 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-204ENST00000535180 TCF7P36402 384 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-204ENST00000535180 FAM189BP81408 668 aa12.39□□□□□ -0.43
VAMP1-204ENST00000535180 SEMA3FQ13275 785 aa12.39□□□□□ -0.43
VAMP1-204ENST00000535180 GIT2Q14161 759 aa12.39□□□□□ -0.43
VAMP1-204ENST00000535180 C15orf39Q6ZRI6 1047 aa12.39□□□□□ -0.43
VAMP1-204ENST00000535180 LRRC43Q8N309 656 aa12.39□□□□□ -0.43
VAMP1-204ENST00000535180 KDF1Q8NAX2 398 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-204ENST00000535180 ZBTB10Q96DT7 871 aa12.39□□□□□ -0.43
VAMP1-204ENST00000535180 SHDQ96IW2 340 aa12.39□□□□□ -0.43
VAMP1-204ENST00000535180 CASD1Q96PB1 797 aa12.39□□□□□ -0.43
VAMP1-204ENST00000535180 INPP4AQ96PE3 977 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-204ENST00000535180 SENP7Q9BQF6 1050 aa12.39□□□□□ -0.43
VAMP1-204ENST00000535180 ECHDC1Q9NTX5 307 aa12.39□□□□□ -0.43
VAMP1-204ENST00000535180 BAZ2BQ9UIF8 2168 aaKnown RBP12.38□□□□□ -0.43
VAMP1-204ENST00000535180 FIBPO43427 364 aa12.38□□□□□ -0.43
VAMP1-204ENST00000535180 MARK3P27448 753 aa12.38□□□□□ -0.43
VAMP1-204ENST00000535180 GBP2P32456 591 aaPredicted RBP12.38□□□□□ -0.43
VAMP1-204ENST00000535180 IGBP1P78318 339 aa12.38□□□□□ -0.43
VAMP1-204ENST00000535180 MRPS9P82933 396 aaKnown RBP12.38□□□□□ -0.43
VAMP1-204ENST00000535180 KRT76Q01546 638 aa12.38□□□□□ -0.43
VAMP1-204ENST00000535180 SP4Q02446 784 aa12.38□□□□□ -0.43
VAMP1-204ENST00000535180 RRP12Q5JTH9 1297 aaKnown RBP12.38□□□□□ -0.43
VAMP1-204ENST00000535180 PPFIBP1Q86W92 1011 aa12.38□□□□□ -0.43
VAMP1-204ENST00000535180 NME8Q8N427 588 aa12.38□□□□□ -0.43
VAMP1-204ENST00000535180 AMNQ9BXJ7 453 aa12.38□□□□□ -0.43
VAMP1-204ENST00000535180 ZBP1Q9H171 429 aa12.38□□□□□ -0.43
VAMP1-204ENST00000535180 JMJD4Q9H9V9 463 aa12.38□□□□□ -0.43
VAMP1-204ENST00000535180 DOCK6Q96HP0 2047 aa12.38□□□□□ -0.43
VAMP1-204ENST00000535180 COL4A3Q01955 1670 aa12.38□□□□□ -0.43
VAMP1-204ENST00000535180 KANSL1LA0AUZ9 987 aa12.37□□□□□ -0.43
VAMP1-204ENST00000535180 SPDYE4A6NLX3 237 aa12.37□□□□□ -0.43
VAMP1-204ENST00000535180 C1QTNF9BB2RNN3 333 aa12.37□□□□□ -0.43
VAMP1-204ENST00000535180 HOXA2O43364 376 aa12.37□□□□□ -0.43
VAMP1-204ENST00000535180 RPS6KA5O75582 802 aa12.37□□□□□ -0.43
VAMP1-204ENST00000535180 C1QTNF9P0C862 333 aa12.37□□□□□ -0.43
VAMP1-204ENST00000535180 INSRRP14616 1297 aa12.37□□□□□ -0.43
VAMP1-204ENST00000535180 MAGEA9P43362 315 aa12.37□□□□□ -0.43
VAMP1-204ENST00000535180 ODR4Q5SWX8 454 aa12.37□□□□□ -0.43
VAMP1-204ENST00000535180 LAIR1Q6GTX8 287 aa12.37□□□□□ -0.43
VAMP1-204ENST00000535180 UNQ6494/PRO21346Q6UXR6 183 aa12.37□□□□□ -0.43
VAMP1-204ENST00000535180 SIRT2Q8IXJ6 389 aa12.37□□□□□ -0.43
VAMP1-204ENST00000535180 VPS52Q8N1B4 723 aa12.37□□□□□ -0.43
VAMP1-204ENST00000535180 AUTS2Q8WXX7 1259 aa12.37□□□□□ -0.43
VAMP1-204ENST00000535180 DDX23Q9BUQ8 820 aaKnown RBP12.37□□□□□ -0.43
VAMP1-204ENST00000535180 FAM126AQ9BYI3 521 aaPredicted RBP12.37□□□□□ -0.43
VAMP1-204ENST00000535180 OSBPL6Q9BZF3 934 aa12.37□□□□□ -0.43
VAMP1-204ENST00000535180 VAT1LQ9HCJ6 419 aa12.37□□□□□ -0.43
VAMP1-204ENST00000535180 SEMA4GQ9NTN9 838 aa12.37□□□□□ -0.43
VAMP1-204ENST00000535180 RAB23Q9ULC3 237 aa12.37□□□□□ -0.43
VAMP1-204ENST00000535180 NOC2LQ9Y3T9 749 aaKnown RBP12.37□□□□□ -0.43
VAMP1-204ENST00000535180 PCDHA2Q9Y5H9 948 aa12.37□□□□□ -0.43
VAMP1-204ENST00000535180 HELZ2Q9BYK8 2649 aaKnown RBP12.36□□□□□ -0.43
VAMP1-204ENST00000535180 DHX16O60231 1041 aaKnown RBP12.36□□□□□ -0.43
VAMP1-204ENST00000535180 GDF9O60383 454 aa12.36□□□□□ -0.43
VAMP1-204ENST00000535180 CTSAP10619 480 aa12.36□□□□□ -0.43
VAMP1-204ENST00000535180 CSRP2Q16527 193 aa12.36□□□□□ -0.43
VAMP1-204ENST00000535180 ZMYM1Q5SVZ6 1142 aa12.36□□□□□ -0.43
VAMP1-204ENST00000535180 PRR23CQ6ZRP0 262 aa12.36□□□□□ -0.43
VAMP1-204ENST00000535180 FCHSD1Q86WN1 690 aa12.36□□□□□ -0.43
VAMP1-204ENST00000535180 GIMAP8Q8ND71 665 aaPredicted RBP12.36□□□□□ -0.43
VAMP1-204ENST00000535180 STAMQ92783 540 aa12.36□□□□□ -0.43
VAMP1-204ENST00000535180 SMARCAD1Q9H4L7 1026 aa12.36□□□□□ -0.43
VAMP1-204ENST00000535180 WDR6Q9NNW5 1121 aaKnown RBP12.36□□□□□ -0.43
VAMP1-204ENST00000535180 RNF19AQ9NV58 838 aa12.36□□□□□ -0.43
VAMP1-204ENST00000535180 RTEL1Q9NZ71 1219 aa12.36□□□□□ -0.43
VAMP1-204ENST00000535180 ST3GAL5Q9UNP4 418 aa12.36□□□□□ -0.43
VAMP1-204ENST00000535180 SMIM35A0A1B0GVV1 85 aa12.35□□□□□ -0.43
VAMP1-204ENST00000535180 GSTTP1A0A1W2PQM5 241 aa12.35□□□□□ -0.43
VAMP1-204ENST00000535180 GPR182O15218 404 aa12.35□□□□□ -0.43
VAMP1-204ENST00000535180 RETP07949 1114 aa12.35□□□□□ -0.43
VAMP1-204ENST00000535180 ALDH7A1P49419 539 aaKnown RBP12.35□□□□□ -0.43
VAMP1-204ENST00000535180 POLGP54098 1239 aaPredicted RBP12.35□□□□□ -0.43
VAMP1-204ENST00000535180 ASPRV1Q53RT3 343 aa12.35□□□□□ -0.43
VAMP1-204ENST00000535180 IL31Q6EBC2 164 aa12.35□□□□□ -0.43
VAMP1-204ENST00000535180 TSSK4Q6SA08 328 aa12.35□□□□□ -0.43
VAMP1-204ENST00000535180 ABI1Q8IZP0 508 aa12.35□□□□□ -0.43
VAMP1-204ENST00000535180 SEPT1Q8WYJ6 367 aa12.35□□□□□ -0.43
VAMP1-204ENST00000535180 TMEM169Q96HH4 297 aa12.35□□□□□ -0.43
VAMP1-204ENST00000535180 MYADMQ96S97 322 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms