RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 NUDT10Q8NFP7 164 aa5.07□□□□□ -1.6
USP48-215ENST00000534705 DLG3Q92796 817 aa5.07□□□□□ -1.6
USP48-215ENST00000534705 NINJ1Q92982 152 aa5.07□□□□□ -1.6
USP48-215ENST00000534705 NUDT11Q96G61 164 aa5.07□□□□□ -1.6
USP48-215ENST00000534705 AJUBAQ96IF1 538 aa5.07□□□□□ -1.6
USP48-215ENST00000534705 BOCQ9BWV1 1114 aa5.07□□□□□ -1.6
USP48-215ENST00000534705 KCNH7Q9NS40 1196 aa5.07□□□□□ -1.6
USP48-215ENST00000534705 RIC8BQ9NVN3 520 aa5.07□□□□□ -1.6
USP48-215ENST00000534705 WDR97A6NE52 1622 aa5.06□□□□□ -1.6
USP48-215ENST00000534705 OPA1O60313 960 aa5.06□□□□□ -1.6
USP48-215ENST00000534705 POU3F2P20265 443 aaPredicted RBP5.06□□□□□ -1.6
USP48-215ENST00000534705 PFKPQ01813 784 aa5.06□□□□□ -1.6
USP48-215ENST00000534705 HNRNPA0Q13151 305 aaKnown RBP5.06□□□□□ -1.6
USP48-215ENST00000534705 SMAD2Q15796 467 aaKnown RBP5.06□□□□□ -1.6
USP48-215ENST00000534705 DPY19L2P1Q6NXN4 242 aa5.06□□□□□ -1.6
USP48-215ENST00000534705 C1orf210Q8IVY1 113 aa5.06□□□□□ -1.6
USP48-215ENST00000534705 CHST14Q8NCH0 376 aa5.06□□□□□ -1.6
USP48-215ENST00000534705 LRRC37BQ96QE4 947 aa5.06□□□□□ -1.6
USP48-215ENST00000534705 KCND1Q9NSA2 647 aa5.06□□□□□ -1.6
USP48-215ENST00000534705 SAMD15Q9P1V8 674 aa5.06□□□□□ -1.6
USP48-215ENST00000534705 ARHGAP20Q9P2F6 1191 aa5.06□□□□□ -1.6
USP48-215ENST00000534705 RBPJLQ9UBG7 517 aa5.06□□□□□ -1.6
USP48-215ENST00000534705 TNPO3Q9Y5L0 923 aaKnown RBP5.06□□□□□ -1.6
USP48-215ENST00000534705 PRAMEF25A6NGN4 478 aa5.05□□□□□ -1.6
USP48-215ENST00000534705 HIP1RO75146 1068 aa5.05□□□□□ -1.6
USP48-215ENST00000534705 MAFO75444 373 aaPredicted RBP5.05□□□□□ -1.6
USP48-215ENST00000534705 GLRX3O76003 335 aaKnown RBP5.05□□□□□ -1.6
USP48-215ENST00000534705 KLHL18O94889 574 aa5.05□□□□□ -1.6
USP48-215ENST00000534705 KNG1P01042 644 aa5.05□□□□□ -1.6
USP48-215ENST00000534705 ADH4P08319 380 aa5.05□□□□□ -1.6
USP48-215ENST00000534705 SDSP20132 328 aa5.05□□□□□ -1.6
USP48-215ENST00000534705 KRTAP15-1Q3LI76 137 aa5.05□□□□□ -1.6
USP48-215ENST00000534705 TKFCQ3LXA3 575 aa5.05□□□□□ -1.6
USP48-215ENST00000534705 ZNF568Q3ZCX4 644 aa5.05□□□□□ -1.6
USP48-215ENST00000534705 PLEKHG4Q58EX7 1191 aa5.05□□□□□ -1.6
USP48-215ENST00000534705 UBE2R2Q712K3 238 aaPredicted RBP5.05□□□□□ -1.6
USP48-215ENST00000534705 KIF18BQ86Y91 864 aa5.05□□□□□ -1.6
USP48-215ENST00000534705 REXO1L1PQ8IX06 675 aa5.05□□□□□ -1.6
USP48-215ENST00000534705 C2orf69Q8N8R5 385 aa5.05□□□□□ -1.6
USP48-215ENST00000534705 FAM89AQ96GI7 184 aa5.05□□□□□ -1.6
USP48-215ENST00000534705 BTBD7Q9P203 1132 aa5.05□□□□□ -1.6
USP48-215ENST00000534705 ZFP69BQ9UJL9 534 aa5.05□□□□□ -1.6
USP48-215ENST00000534705 CD2APQ9Y5K6 639 aa5.05□□□□□ -1.6
USP48-215ENST00000534705 PCSK5Q92824 1860 aa5.05□□□□□ -1.6
USP48-215ENST00000534705 TARBP1Q13395 1621 aaKnown RBP5.05□□□□□ -1.6
USP48-215ENST00000534705 DNMBPQ6XZF7 1577 aa5.04□□□□□ -1.6
USP48-215ENST00000534705 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.04□□□□□ -1.6
USP48-215ENST00000534705 M0R2C6 588 aa5.04□□□□□ -1.6
USP48-215ENST00000534705 CBX4O00257 560 aa5.04□□□□□ -1.6
USP48-215ENST00000534705 PLSCR1O15162 318 aa5.04□□□□□ -1.6
USP48-215ENST00000534705 ZBTB48P10074 688 aaPredicted RBP5.04□□□□□ -1.6
USP48-215ENST00000534705 ACO1P21399 889 aaKnown RBP5.04□□□□□ -1.6
USP48-215ENST00000534705 PTGS1P23219 599 aa5.04□□□□□ -1.6
USP48-215ENST00000534705 FNTBP49356 437 aa5.04□□□□□ -1.6
USP48-215ENST00000534705 ATXN1P54253 815 aaKnown RBP5.04□□□□□ -1.6
USP48-215ENST00000534705 DGCR2P98153 550 aa5.04□□□□□ -1.6
USP48-215ENST00000534705 IRF9Q00978 393 aa5.04□□□□□ -1.6
USP48-215ENST00000534705 ZNF460Q14592 562 aa5.04□□□□□ -1.6
USP48-215ENST00000534705 SEC23AQ15436 765 aa5.04□□□□□ -1.6
USP48-215ENST00000534705 STILQ15468 1287 aa5.04□□□□□ -1.6
USP48-215ENST00000534705 TAF7LQ5H9L4 462 aa5.04□□□□□ -1.6
USP48-215ENST00000534705 CC2D1AQ6P1N0 951 aaPredicted RBP5.04□□□□□ -1.6
USP48-215ENST00000534705 DPP8Q6V1X1 898 aaPredicted RBP5.04□□□□□ -1.6
USP48-215ENST00000534705 CXXC5Q7LFL8 322 aaKnown RBP5.04□□□□□ -1.6
USP48-215ENST00000534705 POLNQ7Z5Q5 900 aa5.04□□□□□ -1.6
USP48-215ENST00000534705 MRGPRGQ86SM5 289 aa5.04□□□□□ -1.6
USP48-215ENST00000534705 NIM1KQ8IY84 436 aa5.04□□□□□ -1.6
USP48-215ENST00000534705 PLEKHG4BQ96PX9 1271 aa5.04□□□□□ -1.6
USP48-215ENST00000534705 CABP5Q9NP86 173 aa5.04□□□□□ -1.6
USP48-215ENST00000534705 INCENPQ9NQS7 918 aa5.04□□□□□ -1.6
USP48-215ENST00000534705 ARHGAP28Q9P2N2 729 aa5.04□□□□□ -1.6
USP48-215ENST00000534705 B4GALT6Q9UBX8 382 aa5.04□□□□□ -1.6
USP48-215ENST00000534705 TMA7Q9Y2S6 64 aaKnown RBP5.04□□□□□ -1.6
USP48-215ENST00000534705 ASB1Q9Y576 335 aa5.04□□□□□ -1.6
USP48-215ENST00000534705 TOPBP1Q92547 1522 aa5.03□□□□□ -1.6
USP48-215ENST00000534705 SCDO00767 359 aa5.03□□□□□ -1.6
USP48-215ENST00000534705 FOXP2O15409 715 aa5.03□□□□□ -1.6
USP48-215ENST00000534705 CUTAO60888 179 aa5.03□□□□□ -1.6
USP48-215ENST00000534705 RAD17O75943 681 aa5.03□□□□□ -1.6
USP48-215ENST00000534705 FBXO21O94952 628 aa5.03□□□□□ -1.6
USP48-215ENST00000534705 MAKP20794 623 aa5.03□□□□□ -1.6
USP48-215ENST00000534705 CSF2RBP32927 897 aa5.03□□□□□ -1.6
USP48-215ENST00000534705 TM4SF20Q53R12 229 aa5.03□□□□□ -1.6
USP48-215ENST00000534705 PIK3R6Q5UE93 754 aa5.03□□□□□ -1.6
USP48-215ENST00000534705 FSTL4Q6MZW2 842 aa5.03□□□□□ -1.6
USP48-215ENST00000534705 LDLRAD3Q86YD5 345 aa5.03□□□□□ -1.6
USP48-215ENST00000534705 FUKQ8N0W3 1084 aa5.03□□□□□ -1.6
USP48-215ENST00000534705 PPM1KQ8N3J5 372 aa5.03□□□□□ -1.6
USP48-215ENST00000534705 ASB15Q8WXK1 588 aa5.03□□□□□ -1.6
USP48-215ENST00000534705 MFSD3Q96ES6 412 aa5.03□□□□□ -1.6
USP48-215ENST00000534705 NEIL1Q96FI4 390 aaPredicted RBP5.03□□□□□ -1.6
USP48-215ENST00000534705 FBXO10Q9UK96 956 aa5.03□□□□□ -1.6
USP48-215ENST00000534705 BIVM-ERCC5R4GMW8 1640 aa5.02□□□□□ -1.61
USP48-215ENST00000534705 TLDC2A0PJX2 215 aa5.02□□□□□ -1.61
USP48-215ENST00000534705 H0Y858 1186 aa5.02□□□□□ -1.61
USP48-215ENST00000534705 TRAF5O00463 557 aa5.02□□□□□ -1.61
USP48-215ENST00000534705 KCNK3O14649 394 aa5.02□□□□□ -1.61
USP48-215ENST00000534705 MPIG6BO95866 241 aa5.02□□□□□ -1.61
USP48-215ENST00000534705 IL18BPO95998 194 aa5.02□□□□□ -1.61
USP48-215ENST00000534705 JMJD7P0C870 316 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms