RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	RPL10	P27635	214 aa	Known RBP	7.61	□□□□□ -1.19
PICALM-223	ENST00000534412	HIBADH	P31937	336 aa	Known RBP	7.61	□□□□□ -1.19
PICALM-223	ENST00000534412	CCNF	P41002	786 aa		7.61	□□□□□ -1.19
PICALM-223	ENST00000534412	GYG1	P46976	350 aa		7.61	□□□□□ -1.19
PICALM-223	ENST00000534412	UBXN2A	P68543	259 aa		7.61	□□□□□ -1.19
PICALM-223	ENST00000534412	TEK	Q02763	1124 aa		7.61	□□□□□ -1.19
PICALM-223	ENST00000534412	PRKCZ	Q05513	592 aa		7.61	□□□□□ -1.19
PICALM-223	ENST00000534412	NR0B2	Q15466	257 aa		7.61	□□□□□ -1.19
PICALM-223	ENST00000534412	KRTAP19-4	Q3LI73	84 aa		7.61	□□□□□ -1.19
PICALM-223	ENST00000534412	EPHA10	Q5JZY3	1008 aa		7.61	□□□□□ -1.19
PICALM-223	ENST00000534412	BEND3	Q5T5X7	828 aa		7.61	□□□□□ -1.19
PICALM-223	ENST00000534412	LDHAL6A	Q6ZMR3	332 aa		7.61	□□□□□ -1.19
PICALM-223	ENST00000534412	RNF111	Q6ZNA4	994 aa		7.61	□□□□□ -1.19
PICALM-223	ENST00000534412	NLRC3	Q7RTR2	1065 aa		7.61	□□□□□ -1.19
PICALM-223	ENST00000534412	DAGLB	Q8NCG7	672 aa		7.61	□□□□□ -1.19
PICALM-223	ENST00000534412	VWCE	Q96DN2	955 aa		7.61	□□□□□ -1.19
PICALM-223	ENST00000534412	ZDHHC15	Q96MV8	337 aa		7.61	□□□□□ -1.19
PICALM-223	ENST00000534412	MRI	Q9BWK5	157 aa		7.61	□□□□□ -1.19
PICALM-223	ENST00000534412	CNNM2	Q9H8M5	875 aa		7.61	□□□□□ -1.19
PICALM-223	ENST00000534412	CPA4	Q9UI42	421 aa		7.61	□□□□□ -1.19
PICALM-223	ENST00000534412	ZMYM5	Q9UJ78	669 aa		7.61	□□□□□ -1.19
PICALM-223	ENST00000534412	MUC3A	Q02505	3323 aa		7.61	□□□□□ -1.19
PICALM-223	ENST00000534412	EYS	Q5T1H1	3165 aa		7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	LAMA2	P24043	3122 aa	Known RBP	7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	SGPL1	O95470	568 aa		7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	C1QTNF9	P0C862	333 aa		7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	CACNB3	P54284	484 aa		7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	PCBP3	P57721	371 aa	Known RBP	7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	SNX17	Q15036	470 aa		7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	CCDC57	Q2TAC2	916 aa		7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	NOL9	Q5SY16	702 aa	Known RBP	7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	DCAF15	Q66K64	600 aa		7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	APOBEC3H	Q6NTF7	200 aa	Known RBP	7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	LMBR1L	Q6UX01	489 aa		7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	ZNF655	Q8N720	491 aa	Predicted RBP	7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	TBC1D22A	Q8WUA7	517 aa		7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	KCNN1	Q92952	543 aa		7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	TEKT1	Q969V4	418 aa		7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	ATG4C	Q96DT6	458 aa		7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	PARK7	Q99497	189 aa	Known RBP	7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	SPON2	Q9BUD6	331 aa		7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	NT5C1A	Q9BXI3	368 aa		7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	ZNF341	Q9BYN7	854 aa		7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	CNNM1	Q9NRU3	951 aa		7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	GPR160	Q9UJ42	338 aa		7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	ZNF112	Q9UJU3	913 aa		7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	SUGT1	Q9Y2Z0	365 aa		7.6	□□□□□ -1.19
PICALM-223	ENST00000534412	IL16	Q14005	1332 aa		7.59	□□□□□ -1.19
PICALM-223	ENST00000534412	MROH5	Q6ZUA9	1318 aa		7.59	□□□□□ -1.19
PICALM-223	ENST00000534412	TCAF2	A6NFQ2	919 aa		7.59	□□□□□ -1.19
PICALM-223	ENST00000534412	GRM8	O00222	908 aa		7.59	□□□□□ -1.19
PICALM-223	ENST00000534412	POLR2B	P30876	1174 aa	Known RBP	7.59	□□□□□ -1.19
PICALM-223	ENST00000534412	BMP8B	P34820	402 aa		7.59	□□□□□ -1.19
PICALM-223	ENST00000534412	CLC	Q05315	142 aa		7.59	□□□□□ -1.19
PICALM-223	ENST00000534412	IRF2BP1	Q8IU81	584 aa		7.59	□□□□□ -1.19
PICALM-223	ENST00000534412	GDF15	Q99988	308 aa		7.59	□□□□□ -1.19
PICALM-223	ENST00000534412	HDAC8	Q9BY41	377 aa		7.59	□□□□□ -1.19
PICALM-223	ENST00000534412	TMOD2	Q9NZR1	351 aa		7.59	□□□□□ -1.19
PICALM-223	ENST00000534412	CDH23	Q9H251	3354 aa		7.59	□□□□□ -1.2
PICALM-223	ENST00000534412	ATRNL1	Q5VV63	1379 aa		7.59	□□□□□ -1.2
PICALM-223	ENST00000534412	MAST3	O60307	1309 aa		7.58	□□□□□ -1.2
PICALM-223	ENST00000534412	KIF16B	Q96L93	1317 aa		7.58	□□□□□ -1.2
PICALM-223	ENST00000534412	KRTAP4-8	A0A0G2JLE6	195 aa		7.58	□□□□□ -1.2
PICALM-223	ENST00000534412	PLIN1	O60240	522 aa		7.58	□□□□□ -1.2
PICALM-223	ENST00000534412	ZNF16	P17020	682 aa	Predicted RBP	7.58	□□□□□ -1.2
PICALM-223	ENST00000534412	ZNF76	P36508	570 aa		7.58	□□□□□ -1.2
PICALM-223	ENST00000534412	SLC14A2	Q15849	920 aa		7.58	□□□□□ -1.2
PICALM-223	ENST00000534412	LRIT3	Q3SXY7	679 aa		7.58	□□□□□ -1.2
PICALM-223	ENST00000534412	TAF7L	Q5H9L4	462 aa		7.58	□□□□□ -1.2
PICALM-223	ENST00000534412	HHIPL2	Q6UWX4	724 aa		7.58	□□□□□ -1.2
PICALM-223	ENST00000534412	LRRC56	Q8IYG6	542 aa	Predicted RBP	7.58	□□□□□ -1.2
PICALM-223	ENST00000534412	VGLL2	Q8N8G2	317 aa		7.58	□□□□□ -1.2
PICALM-223	ENST00000534412	TCTN2	Q96GX1	697 aa		7.58	□□□□□ -1.2
PICALM-223	ENST00000534412	FOXP3	Q9BZS1	431 aa		7.58	□□□□□ -1.2
PICALM-223	ENST00000534412	MKRN2	Q9H000	416 aa	Known RBP	7.58	□□□□□ -1.2
PICALM-223	ENST00000534412	PRKRIP1	Q9H875	184 aa	Predicted RBP	7.58	□□□□□ -1.2
PICALM-223	ENST00000534412	TCFL5	Q9UL49	500 aa		7.58	□□□□□ -1.2
PICALM-223	ENST00000534412	STXBP5L	Q9Y2K9	1186 aa		7.58	□□□□□ -1.2
PICALM-223	ENST00000534412	YBX2	Q9Y2T7	364 aa	Known RBP	7.58	□□□□□ -1.2
PICALM-223	ENST00000534412	SLC45A1	Q9Y2W3	748 aa		7.58	□□□□□ -1.2
PICALM-223	ENST00000534412	FANCI	Q9NVI1	1328 aa		7.57	□□□□□ -1.2
PICALM-223	ENST00000534412		A0A0G2JLL6	359 aa	Predicted RBP	7.57	□□□□□ -1.2
PICALM-223	ENST00000534412	CXCL11	O14625	94 aa		7.57	□□□□□ -1.2
PICALM-223	ENST00000534412	ADCY3	O60266	1144 aa		7.57	□□□□□ -1.2
PICALM-223	ENST00000534412	CYP2C8	P10632	490 aa		7.57	□□□□□ -1.2
PICALM-223	ENST00000534412	NME1	P15531	152 aa	Known RBP	7.57	□□□□□ -1.2
PICALM-223	ENST00000534412	FLT3LG	P49771	235 aa		7.57	□□□□□ -1.2
PICALM-223	ENST00000534412	ATG14	Q6ZNE5	492 aa		7.57	□□□□□ -1.2
PICALM-223	ENST00000534412	MIGA2	Q7L4E1	593 aa		7.57	□□□□□ -1.2
PICALM-223	ENST00000534412	TMC3	Q7Z5M5	1100 aa		7.57	□□□□□ -1.2
PICALM-223	ENST00000534412	PRRT2	Q7Z6L0	340 aa	Predicted RBP	7.57	□□□□□ -1.2
PICALM-223	ENST00000534412	SLITRK4	Q8IW52	837 aa		7.57	□□□□□ -1.2
PICALM-223	ENST00000534412	FAM151A	Q8WW52	585 aa		7.57	□□□□□ -1.2
PICALM-223	ENST00000534412	INTS4	Q96HW7	963 aa	Known RBP	7.57	□□□□□ -1.2
PICALM-223	ENST00000534412	KAZALD1	Q96I82	304 aa		7.57	□□□□□ -1.2
PICALM-223	ENST00000534412	ZNF512B	Q96KM6	892 aa	Predicted RBP	7.57	□□□□□ -1.2
PICALM-223	ENST00000534412	PUS3	Q9BZE2	481 aa	Known RBP	7.57	□□□□□ -1.2
PICALM-223	ENST00000534412	KCNK12	Q9HB15	430 aa		7.57	□□□□□ -1.2
PICALM-223	ENST00000534412	SP110	Q9HB58	689 aa		7.57	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms