RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 CALML4Q96GE6 196 aa20.82■□□□□ 0.92
SMPD1-210ENST00000534405 MLXIPQ9HAP2 919 aa20.82■□□□□ 0.92
SMPD1-210ENST00000534405 LRRC42Q9Y546 428 aa20.82■□□□□ 0.92
SMPD1-210ENST00000534405 NCALDP61601 193 aa20.82■□□□□ 0.92
SMPD1-210ENST00000534405 GABPAQ06546 454 aa20.82■□□□□ 0.92
SMPD1-210ENST00000534405 DYNC1I2Q13409 638 aaKnown RBP20.82■□□□□ 0.92
SMPD1-210ENST00000534405 UAP1Q16222 522 aaPredicted RBP20.82■□□□□ 0.92
SMPD1-210ENST00000534405 PSMB7Q99436 277 aa20.82■□□□□ 0.92
SMPD1-210ENST00000534405 ABCD1P33897 745 aa20.81■□□□□ 0.92
SMPD1-210ENST00000534405 ZBED6P86452 979 aa20.81■□□□□ 0.92
SMPD1-210ENST00000534405 AMPD3Q01432 767 aa20.81■□□□□ 0.92
SMPD1-210ENST00000534405 SPA17Q15506 151 aa20.81■□□□□ 0.92
SMPD1-210ENST00000534405 CENPPQ6IPU0 288 aa20.81■□□□□ 0.92
SMPD1-210ENST00000534405 CNNM4Q6P4Q7 775 aa20.81■□□□□ 0.92
SMPD1-210ENST00000534405 DYMQ7RTS9 669 aa20.81■□□□□ 0.92
SMPD1-210ENST00000534405 OR2W6PQ8NHA6 318 aa20.81■□□□□ 0.92
SMPD1-210ENST00000534405 ARHGEF10LQ9HCE6 1279 aa20.81■□□□□ 0.92
SMPD1-210ENST00000534405 GPCPD1Q9NPB8 672 aa20.81■□□□□ 0.92
SMPD1-210ENST00000534405 DDX4Q9NQI0 724 aaKnown RBP20.81■□□□□ 0.92
SMPD1-210ENST00000534405 TOM1O60784 492 aa20.8■□□□□ 0.92
SMPD1-210ENST00000534405 TUBP50607 506 aa20.8■□□□□ 0.92
SMPD1-210ENST00000534405 GTF2IP78347 998 aa20.8■□□□□ 0.92
SMPD1-210ENST00000534405 PPARDQ03181 441 aa20.8■□□□□ 0.92
SMPD1-210ENST00000534405 ADAM9Q13443 819 aa20.8■□□□□ 0.92
SMPD1-210ENST00000534405 COBLL1Q53SF7 1204 aa20.8■□□□□ 0.92
SMPD1-210ENST00000534405 FAM133BQ5BKY9 247 aaKnown RBP20.8■□□□□ 0.92
SMPD1-210ENST00000534405 SV2BQ7L1I2 683 aa20.8■□□□□ 0.92
SMPD1-210ENST00000534405 KCNK18Q7Z418 384 aa20.8■□□□□ 0.92
SMPD1-210ENST00000534405 LRRC45Q96CN5 670 aa20.8■□□□□ 0.92
SMPD1-210ENST00000534405 RBM17Q96I25 401 aaKnown RBP20.8■□□□□ 0.92
SMPD1-210ENST00000534405 PCMTD1Q96MG8 357 aaPredicted RBP20.8■□□□□ 0.92
SMPD1-210ENST00000534405 ERGIC2Q96RQ1 377 aa20.8■□□□□ 0.92
SMPD1-210ENST00000534405 NOVA2Q9UNW9 492 aaKnown RBP20.8■□□□□ 0.92
SMPD1-210ENST00000534405 FOCADQ5VW36 1801 aa20.8■□□□□ 0.92
SMPD1-210ENST00000534405 EPHB6O15197 1021 aa20.8■□□□□ 0.92
SMPD1-210ENST00000534405 RARAP10276 462 aa20.8■□□□□ 0.92
SMPD1-210ENST00000534405 FXR2P51116 673 aaKnown RBP eCLIP20.8■□□□□ 0.92
SMPD1-210ENST00000534405 FAM114A1Q8IWE2 563 aa20.8■□□□□ 0.92
SMPD1-210ENST00000534405 LMNTD2Q8IXW0 634 aa20.8■□□□□ 0.92
SMPD1-210ENST00000534405 RETREG2Q8NC44 543 aa20.8■□□□□ 0.92
SMPD1-210ENST00000534405 TLR10Q9BXR5 811 aa20.8■□□□□ 0.92
SMPD1-210ENST00000534405 ZCWPW1Q9H0M4 648 aa20.8■□□□□ 0.92
SMPD1-210ENST00000534405 ADAM22Q9P0K1 906 aa20.8■□□□□ 0.92
SMPD1-210ENST00000534405 PLIN4Q96Q06 1357 aa20.8■□□□□ 0.92
SMPD1-210ENST00000534405 C6orf229H3BNL8 230 aa20.79■□□□□ 0.92
SMPD1-210ENST00000534405 PPP1R11O60927 126 aaPredicted RBP20.79■□□□□ 0.92
SMPD1-210ENST00000534405 WFS1O76024 890 aa20.79■□□□□ 0.92
SMPD1-210ENST00000534405 PLEKP08567 350 aaPredicted RBP20.79■□□□□ 0.92
SMPD1-210ENST00000534405 SNHG28P0DPA3 235 aa20.79■□□□□ 0.92
SMPD1-210ENST00000534405 MYBP10242 640 aa20.79■□□□□ 0.92
SMPD1-210ENST00000534405 CTNNA1P35221 906 aaKnown RBP20.79■□□□□ 0.92
SMPD1-210ENST00000534405 ADCY7P51828 1080 aa20.79■□□□□ 0.92
SMPD1-210ENST00000534405 DPP8Q6V1X1 898 aaPredicted RBP20.79■□□□□ 0.92
SMPD1-210ENST00000534405 GLIS3Q8NEA6 775 aa20.79■□□□□ 0.92
SMPD1-210ENST00000534405 LARP4BQ92615 738 aaKnown RBP20.79■□□□□ 0.92
SMPD1-210ENST00000534405 PCMTD2Q9NV79 361 aa20.79■□□□□ 0.92
SMPD1-210ENST00000534405 TSKSQ9UJT2 592 aa20.79■□□□□ 0.92
SMPD1-210ENST00000534405 ZNF232Q9UNY5 417 aa20.79■□□□□ 0.92
SMPD1-210ENST00000534405 IGKV6D-41A0A0C4DH26 115 aa20.79■□□□□ 0.92
SMPD1-210ENST00000534405 ZNF131P52739 623 aa20.79■□□□□ 0.92
SMPD1-210ENST00000534405 MAGOHP61326 146 aaKnown RBP20.79■□□□□ 0.92
SMPD1-210ENST00000534405 ORC2Q13416 577 aaPredicted RBP20.79■□□□□ 0.92
SMPD1-210ENST00000534405 UBE2SQ16763 222 aa20.79■□□□□ 0.92
SMPD1-210ENST00000534405 UNC13DQ70J99 1090 aa20.79■□□□□ 0.92
SMPD1-210ENST00000534405 GJA10Q969M2 543 aa20.79■□□□□ 0.92
SMPD1-210ENST00000534405 MAGOHBQ96A72 148 aaKnown RBP20.79■□□□□ 0.92
SMPD1-210ENST00000534405 ISCUQ9H1K1 167 aa20.79■□□□□ 0.92
SMPD1-210ENST00000534405 TRADDQ15628 312 aa20.78■□□□□ 0.92
SMPD1-210ENST00000534405 APBB1IPQ7Z5R6 666 aaPredicted RBP20.78■□□□□ 0.92
SMPD1-210ENST00000534405 SLF2Q8IX21 1173 aa20.78■□□□□ 0.92
SMPD1-210ENST00000534405 MS4A14Q96JA4 679 aa20.78■□□□□ 0.92
SMPD1-210ENST00000534405 SYT15Q9BQS2 421 aa20.78■□□□□ 0.92
SMPD1-210ENST00000534405 PCDHA13Q9Y5I0 950 aa20.78■□□□□ 0.92
SMPD1-210ENST00000534405 IGF2BP3O00425 579 aaKnown RBP eCLIP20.78■□□□□ 0.92
SMPD1-210ENST00000534405 NCK2O43639 380 aa20.78■□□□□ 0.92
SMPD1-210ENST00000534405 SLURP2P0DP57 97 aa20.78■□□□□ 0.92
SMPD1-210ENST00000534405 MYBL1P10243 752 aa20.78■□□□□ 0.92
SMPD1-210ENST00000534405 ECHS1P30084 290 aa20.78■□□□□ 0.92
SMPD1-210ENST00000534405 PPP1R2P41236 205 aa20.78■□□□□ 0.92
SMPD1-210ENST00000534405 ECM1Q16610 540 aa20.78■□□□□ 0.92
SMPD1-210ENST00000534405 ASPRV1Q53RT3 343 aa20.78■□□□□ 0.92
SMPD1-210ENST00000534405 TTBK2Q6IQ55 1244 aa20.78■□□□□ 0.92
SMPD1-210ENST00000534405 KRT26Q7Z3Y9 468 aa20.78■□□□□ 0.92
SMPD1-210ENST00000534405 IFIH1Q9BYX4 1025 aaKnown RBP20.78■□□□□ 0.92
SMPD1-210ENST00000534405 JMJD4Q9H9V9 463 aa20.78■□□□□ 0.92
SMPD1-210ENST00000534405 GRID2IPA4D2P6 1211 aa20.77■□□□□ 0.92
SMPD1-210ENST00000534405 hCG_1984214I3L0E3 225 aa20.77■□□□□ 0.92
SMPD1-210ENST00000534405 RIMBP2O15034 1052 aa20.77■□□□□ 0.92
SMPD1-210ENST00000534405 CTNND1O60716 968 aaKnown RBP20.77■□□□□ 0.92
SMPD1-210ENST00000534405 BBOX1O75936 387 aa20.77■□□□□ 0.92
SMPD1-210ENST00000534405 FLOT1O75955 427 aa20.77■□□□□ 0.92
SMPD1-210ENST00000534405 TPP2P29144 1249 aaPredicted RBP20.77■□□□□ 0.92
SMPD1-210ENST00000534405 FIGNQ5HY92 759 aa20.77■□□□□ 0.92
SMPD1-210ENST00000534405 CERS5Q8N5B7 392 aa20.77■□□□□ 0.92
SMPD1-210ENST00000534405 ZNF713Q8N859 430 aaPredicted RBP20.77■□□□□ 0.92
SMPD1-210ENST00000534405 STK17AQ9UEE5 414 aa20.77■□□□□ 0.92
SMPD1-210ENST00000534405 SIK3Q9Y2K2 1263 aa20.77■□□□□ 0.92
SMPD1-210ENST00000534405 EIF4E1BA6NMX2 242 aaKnown RBP20.77■□□□□ 0.92
SMPD1-210ENST00000534405 A8MUI8 341 aa20.77■□□□□ 0.92
SMPD1-210ENST00000534405 ECEL1O95672 775 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms