RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 MAP3K21Q5TCX8 1036 aa18.57■□□□□ 0.56
PHRF1-206ENST00000534320 TRIM68Q6AZZ1 485 aa18.57■□□□□ 0.56
PHRF1-206ENST00000534320 EFCAB13Q8IY85 973 aa18.57■□□□□ 0.56
PHRF1-206ENST00000534320 HPS3Q969F9 1004 aa18.57■□□□□ 0.56
PHRF1-206ENST00000534320 SLC16A4O15374 487 aa18.57■□□□□ 0.56
PHRF1-206ENST00000534320 FDX1P10109 184 aa18.57■□□□□ 0.56
PHRF1-206ENST00000534320 MARK3P27448 753 aa18.57■□□□□ 0.56
PHRF1-206ENST00000534320 GFPT1Q06210 699 aaPredicted RBP18.57■□□□□ 0.56
PHRF1-206ENST00000534320 PTPAQ15257 358 aa18.57■□□□□ 0.56
PHRF1-206ENST00000534320 TMEM60Q9H2L4 133 aa18.57■□□□□ 0.56
PHRF1-206ENST00000534320 NXF1Q9UBU9 619 aaKnown RBP18.57■□□□□ 0.56
PHRF1-206ENST00000534320 TCRBV5S4A2TA0A5A2 114 aa18.57■□□□□ 0.56
PHRF1-206ENST00000534320 ANO9A1A5B4 782 aa18.57■□□□□ 0.56
PHRF1-206ENST00000534320 CAPN9O14815 690 aa18.57■□□□□ 0.56
PHRF1-206ENST00000534320 PPFIA2O75334 1257 aa18.57■□□□□ 0.56
PHRF1-206ENST00000534320 EYA4O95677 639 aa18.57■□□□□ 0.56
PHRF1-206ENST00000534320 PHBP35232 272 aa18.57■□□□□ 0.56
PHRF1-206ENST00000534320 TRIM50Q86XT4 487 aa18.57■□□□□ 0.56
PHRF1-206ENST00000534320 JMJD4Q9H9V9 463 aa18.57■□□□□ 0.56
PHRF1-206ENST00000534320 STX2P32856 288 aa18.56■□□□□ 0.56
PHRF1-206ENST00000534320 GCLMP48507 274 aa18.56■□□□□ 0.56
PHRF1-206ENST00000534320 OSTNP61366 133 aa18.56■□□□□ 0.56
PHRF1-206ENST00000534320 CCZ1BP86790 482 aa18.56■□□□□ 0.56
PHRF1-206ENST00000534320 CCZ1P86791 482 aaPredicted RBP18.56■□□□□ 0.56
PHRF1-206ENST00000534320 LMNB2Q03252 620 aa18.56■□□□□ 0.56
PHRF1-206ENST00000534320 CTAGE3PQ8IX95 158 aa18.56■□□□□ 0.56
PHRF1-206ENST00000534320 HAUS1Q96CS2 278 aa18.56■□□□□ 0.56
PHRF1-206ENST00000534320 CAPN11Q9UMQ6 739 aa18.56■□□□□ 0.56
PHRF1-206ENST00000534320 PALM3A6NDB9 673 aaPredicted RBP18.56■□□□□ 0.56
PHRF1-206ENST00000534320 EPHA7Q15375 998 aa18.56■□□□□ 0.56
PHRF1-206ENST00000534320 SURF1Q15526 300 aa18.56■□□□□ 0.56
PHRF1-206ENST00000534320 SGO2Q562F6 1265 aa18.56■□□□□ 0.56
PHRF1-206ENST00000534320 CCDC117Q8IWD4 279 aaPredicted RBP18.56■□□□□ 0.56
PHRF1-206ENST00000534320 RHOT2Q8IXI1 618 aa18.56■□□□□ 0.56
PHRF1-206ENST00000534320 RRP15Q9Y3B9 282 aaKnown RBP18.56■□□□□ 0.56
PHRF1-206ENST00000534320 UBR1Q8IWV7 1749 aa18.56■□□□□ 0.56
PHRF1-206ENST00000534320 XPOTO43592 962 aaKnown RBP18.56■□□□□ 0.56
PHRF1-206ENST00000534320 PALMO75781 387 aa18.56■□□□□ 0.56
PHRF1-206ENST00000534320 GYS1P13807 737 aa18.56■□□□□ 0.56
PHRF1-206ENST00000534320 KCTD16Q68DU8 428 aa18.56■□□□□ 0.56
PHRF1-206ENST00000534320 ADGRA1Q86SQ6 560 aa18.56■□□□□ 0.56
PHRF1-206ENST00000534320 LDHAP00338 332 aaKnown RBP18.56■□□□□ 0.56
PHRF1-206ENST00000534320 ELOA2Q8IYF1 753 aaPredicted RBP18.56■□□□□ 0.56
PHRF1-206ENST00000534320 BCAS4Q8TDM0 211 aa18.56■□□□□ 0.56
PHRF1-206ENST00000534320 ABCB6Q9NP58 842 aa18.56■□□□□ 0.56
PHRF1-206ENST00000534320 PPP2R5DQ14738 602 aa18.55■□□□□ 0.56
PHRF1-206ENST00000534320 LRRC23Q53EV4 343 aaPredicted RBP18.55■□□□□ 0.56
PHRF1-206ENST00000534320 BRD2P25440 801 aaKnown RBP18.55■□□□□ 0.56
PHRF1-206ENST00000534320 PSMC5P62195 406 aa18.55■□□□□ 0.56
PHRF1-206ENST00000534320 ANKRD20A3Q5VUR7 823 aa18.55■□□□□ 0.56
PHRF1-206ENST00000534320 BSPRYQ5W0U4 402 aa18.55■□□□□ 0.56
PHRF1-206ENST00000534320 STYK1Q6J9G0 422 aa18.55■□□□□ 0.56
PHRF1-206ENST00000534320 MAP7D3Q8IWC1 876 aa18.55■□□□□ 0.56
PHRF1-206ENST00000534320 NLRP7Q8WX94 980 aa18.55■□□□□ 0.56
PHRF1-206ENST00000534320 SLC10A4Q96EP9 437 aa18.55■□□□□ 0.56
PHRF1-206ENST00000534320 TUFT1Q9NNX1 390 aa18.55■□□□□ 0.56
PHRF1-206ENST00000534320 EIF3CLB5ME19 914 aaKnown RBP18.55■□□□□ 0.56
PHRF1-206ENST00000534320 GOLGA8SH3BPF8 625 aa18.55■□□□□ 0.56
PHRF1-206ENST00000534320 HGSO14964 777 aaPredicted RBP18.55■□□□□ 0.56
PHRF1-206ENST00000534320 SRGAP2O75044 1071 aa18.55■□□□□ 0.56
PHRF1-206ENST00000534320 CD58P19256 250 aa18.55■□□□□ 0.56
PHRF1-206ENST00000534320 DNAJC24Q6P3W2 148 aa18.55■□□□□ 0.56
PHRF1-206ENST00000534320 TXNRD3Q86VQ6 643 aa18.55■□□□□ 0.56
PHRF1-206ENST00000534320 EIF3CQ99613 913 aaKnown RBP18.55■□□□□ 0.56
PHRF1-206ENST00000534320 RGL1Q9NZL6 768 aa18.55■□□□□ 0.56
PHRF1-206ENST00000534320 STK38LQ9Y2H1 464 aa18.55■□□□□ 0.56
PHRF1-206ENST00000534320 TACC3Q9Y6A5 838 aa18.55■□□□□ 0.56
PHRF1-206ENST00000534320 OPHN1O60890 802 aa18.55■□□□□ 0.56
PHRF1-206ENST00000534320 PLTPP55058 493 aa18.55■□□□□ 0.56
PHRF1-206ENST00000534320 SF3A3Q12874 501 aaKnown RBP eCLIP18.55■□□□□ 0.561e-6■■■■■ 28.7
PHRF1-206ENST00000534320 MTF1Q14872 753 aa18.55■□□□□ 0.56
PHRF1-206ENST00000534320 NLRP4Q96MN2 994 aa18.55■□□□□ 0.56
PHRF1-206ENST00000534320 ZNF70Q9UC06 446 aaPredicted RBP18.55■□□□□ 0.56
PHRF1-206ENST00000534320 SLC7A5Q01650 507 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 LLGL1Q15334 1064 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 CCDC13Q8IYE1 715 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 GIMAP8Q8ND71 665 aaPredicted RBP18.54■□□□□ 0.56
PHRF1-206ENST00000534320 Q9H521 79 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 GABBR1Q9UBS5 961 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 NR1I3Q14994 352 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 SEC23AQ15436 765 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 RSBN1LQ6PCB5 846 aaPredicted RBP18.54■□□□□ 0.56
PHRF1-206ENST00000534320 CAPN12Q6ZSI9 719 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 RPAP3Q9H6T3 665 aaPredicted RBP18.54■□□□□ 0.56
PHRF1-206ENST00000534320 POLLQ9UGP5 575 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 PRR12Q9ULL5 1215 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 ESYT2A0FGR8 921 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 DENND3A2RUS2 1198 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 ECEL1O95672 775 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 KCNJ6P48051 423 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 STK4Q13043 487 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 SNX1Q13596 522 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 GABPB2Q8TAK5 448 aaPredicted RBP18.54■□□□□ 0.56
PHRF1-206ENST00000534320 TCP11Q8WWU5 503 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 AP1M1Q9BXS5 423 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 KIAA1586Q9HCI6 787 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 TTLL3Q9Y4R7 772 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 TBX3O15119 743 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 CASP8Q14790 479 aa18.54■□□□□ 0.56
PHRF1-206ENST00000534320 AP5M1Q9H0R1 490 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms