RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 TBX21Q9UL17 535 aa17.35■□□□□ 0.37
CTTN-215ENST00000533931 ATP11BQ9Y2G3 1177 aa17.35■□□□□ 0.37
CTTN-215ENST00000533931 LOXHD1Q8IVV2 1947 aa17.35■□□□□ 0.37
CTTN-215ENST00000533931 TMEM150BA6NC51 233 aa17.34■□□□□ 0.37
CTTN-215ENST00000533931 E9PMD0 336 aa17.34■□□□□ 0.37
CTTN-215ENST00000533931 ZBTB39O15060 712 aa17.34■□□□□ 0.37
CTTN-215ENST00000533931 KIAA0355O15063 1070 aa17.34■□□□□ 0.37
CTTN-215ENST00000533931 PLA2G4BP0C869 781 aa17.34■□□□□ 0.37
CTTN-215ENST00000533931 CYP2C9P11712 490 aa17.34■□□□□ 0.37
CTTN-215ENST00000533931 GUCY2CP25092 1073 aa17.34■□□□□ 0.37
CTTN-215ENST00000533931 DNM2P50570 870 aa17.34■□□□□ 0.37
CTTN-215ENST00000533931 SLC12A3P55017 1021 aa17.34■□□□□ 0.37
CTTN-215ENST00000533931 BFSP2Q13515 415 aa17.34■□□□□ 0.37
CTTN-215ENST00000533931 EMC2Q15006 297 aa17.34■□□□□ 0.37
CTTN-215ENST00000533931 PADI6Q6TGC4 694 aa17.34■□□□□ 0.37
CTTN-215ENST00000533931 FAM43BQ6ZT52 329 aaPredicted RBP17.34■□□□□ 0.37
CTTN-215ENST00000533931 FSIP1Q8NA03 581 aa17.34■□□□□ 0.37
CTTN-215ENST00000533931 TRAPPC12Q8WVT3 735 aa17.34■□□□□ 0.37
CTTN-215ENST00000533931 TNMDQ9H2S6 317 aa17.34■□□□□ 0.37
CTTN-215ENST00000533931 A0A087X0B3 334 aa17.33■□□□□ 0.36
CTTN-215ENST00000533931 POLR2DO15514 142 aaKnown RBP17.33■□□□□ 0.36
CTTN-215ENST00000533931 PARNO95453 639 aaKnown RBP17.33■□□□□ 0.36
CTTN-215ENST00000533931 SYKP43405 635 aa17.33■□□□□ 0.36
CTTN-215ENST00000533931 TRIM71Q2Q1W2 868 aaKnown RBP17.33■□□□□ 0.36
CTTN-215ENST00000533931 IER5Q5VY09 327 aa17.33■□□□□ 0.36
CTTN-215ENST00000533931 CCDC34Q96HJ3 373 aa17.33■□□□□ 0.36
CTTN-215ENST00000533931 MAP7D2Q96T17 732 aa17.33■□□□□ 0.36
CTTN-215ENST00000533931 MTRQ99707 1265 aa17.33■□□□□ 0.36
CTTN-215ENST00000533931 KBTBD4Q9NVX7 518 aa17.33■□□□□ 0.36
CTTN-215ENST00000533931 TCHHQ07283 1943 aa17.32■□□□□ 0.36
CTTN-215ENST00000533931 A0A1B0GVL5 298 aa17.32■□□□□ 0.36
CTTN-215ENST00000533931 MYL1P05976 194 aa17.32■□□□□ 0.36
CTTN-215ENST00000533931 SLFN14P0C7P3 912 aa17.32■□□□□ 0.36
CTTN-215ENST00000533931 NDUFA8P51970 172 aa17.32■□□□□ 0.36
CTTN-215ENST00000533931 ZNF200P98182 395 aaPredicted RBP17.32■□□□□ 0.36
CTTN-215ENST00000533931 AMPD3Q01432 767 aa17.32■□□□□ 0.36
CTTN-215ENST00000533931 FAM160A1Q05DH4 1040 aa17.32■□□□□ 0.36
CTTN-215ENST00000533931 FAM26DQ5JW98 314 aa17.32■□□□□ 0.36
CTTN-215ENST00000533931 RINT1Q6NUQ1 792 aa17.32■□□□□ 0.36
CTTN-215ENST00000533931 EFCAB12Q6NXP0 572 aa17.32■□□□□ 0.36
CTTN-215ENST00000533931 CNNM4Q6P4Q7 775 aa17.32■□□□□ 0.36
CTTN-215ENST00000533931 C1orf186Q6ZWK4 172 aa17.32■□□□□ 0.36
CTTN-215ENST00000533931 SV2BQ7L1I2 683 aa17.32■□□□□ 0.36
CTTN-215ENST00000533931 TRMT1LQ7Z2T5 733 aaKnown RBP17.32■□□□□ 0.36
CTTN-215ENST00000533931 KIAA0319LQ8IZA0 1049 aa17.32■□□□□ 0.36
CTTN-215ENST00000533931 LRRC15Q8TF66 581 aa17.32■□□□□ 0.36
CTTN-215ENST00000533931 KIFAP3Q92845 792 aa17.32■□□□□ 0.36
CTTN-215ENST00000533931 C17orf75Q9HAS0 396 aa17.32■□□□□ 0.36
CTTN-215ENST00000533931 XPNPEP1Q9NQW7 623 aa17.32■□□□□ 0.36
CTTN-215ENST00000533931 KCNG1Q9UIX4 513 aa17.32■□□□□ 0.36
CTTN-215ENST00000533931 ODF2LQ9ULJ1 636 aa17.32■□□□□ 0.36
CTTN-215ENST00000533931 DNAH12Q6ZR08 3092 aa17.32■□□□□ 0.36
CTTN-215ENST00000533931 ARID2Q68CP9 1835 aa17.31■□□□□ 0.36
CTTN-215ENST00000533931 ASAP2O43150 1006 aa17.31■□□□□ 0.36
CTTN-215ENST00000533931 USO1O60763 962 aaKnown RBP17.31■□□□□ 0.36
CTTN-215ENST00000533931 MXD4Q14582 209 aaPredicted RBP17.31■□□□□ 0.36
CTTN-215ENST00000533931 KANK3Q6NY19 840 aa17.31■□□□□ 0.36
CTTN-215ENST00000533931 CEP57L1Q8IYX8 460 aa17.31■□□□□ 0.36
CTTN-215ENST00000533931 METTL13Q8N6R0 699 aa17.31■□□□□ 0.36
CTTN-215ENST00000533931 PDILTQ8N807 584 aa17.31■□□□□ 0.36
CTTN-215ENST00000533931 PPP1R13LQ8WUF5 828 aa17.31■□□□□ 0.36
CTTN-215ENST00000533931 PSPC1Q8WXF1 523 aaKnown RBP17.31■□□□□ 0.36
CTTN-215ENST00000533931 DHX38Q92620 1227 aaKnown RBP17.31■□□□□ 0.36
CTTN-215ENST00000533931 DHX58Q96C10 678 aa17.31■□□□□ 0.36
CTTN-215ENST00000533931 DRC1Q96MC2 740 aa17.31■□□□□ 0.36
CTTN-215ENST00000533931 TIGD1Q96MW7 591 aa17.31■□□□□ 0.36
CTTN-215ENST00000533931 PLIN2Q99541 437 aa17.31■□□□□ 0.36
CTTN-215ENST00000533931 NOC4LQ9BVI4 516 aaKnown RBP17.31■□□□□ 0.36
CTTN-215ENST00000533931 BMP2KQ9NSY1 1161 aaPredicted RBP17.31■□□□□ 0.36
CTTN-215ENST00000533931 TMEM39AQ9NV64 488 aa17.31■□□□□ 0.36
CTTN-215ENST00000533931 ACTN4O43707 911 aaKnown RBP17.3■□□□□ 0.36
CTTN-215ENST00000533931 EVI5O60447 810 aa17.3■□□□□ 0.36
CTTN-215ENST00000533931 SCP2P22307 547 aa17.3■□□□□ 0.36
CTTN-215ENST00000533931 ARL2P36404 184 aa17.3■□□□□ 0.36
CTTN-215ENST00000533931 POU5F1BQ06416 359 aa17.3■□□□□ 0.36
CTTN-215ENST00000533931 MCM6Q14566 821 aa17.3■□□□□ 0.36
CTTN-215ENST00000533931 RUFY4Q6ZNE9 571 aa17.3■□□□□ 0.36
CTTN-215ENST00000533931 ZNF410Q86VK4 478 aa17.3■□□□□ 0.36
CTTN-215ENST00000533931 GPBP1Q86WP2 473 aa17.3■□□□□ 0.36
CTTN-215ENST00000533931 ELOA2Q8IYF1 753 aaPredicted RBP17.3■□□□□ 0.36
CTTN-215ENST00000533931 FMR1NBQ8N0W7 255 aaPredicted RBP17.3■□□□□ 0.36
CTTN-215ENST00000533931 ENGASEQ8NFI3 743 aa17.3■□□□□ 0.36
CTTN-215ENST00000533931 SH2D3AQ9BRG2 576 aa17.3■□□□□ 0.36
CTTN-215ENST00000533931 HIPK3Q9H422 1215 aa17.3■□□□□ 0.36
CTTN-215ENST00000533931 GOLPH3LQ9H4A5 285 aa17.3■□□□□ 0.36
CTTN-215ENST00000533931 NR2E3Q9Y5X4 410 aa17.3■□□□□ 0.36
CTTN-215ENST00000533931 SQORQ9Y6N5 450 aa17.3■□□□□ 0.36
CTTN-215ENST00000533931 A0A087WWV3 80 aa17.29■□□□□ 0.36
CTTN-215ENST00000533931 PRPF40AO75400 957 aaKnown RBP17.29■□□□□ 0.36
CTTN-215ENST00000533931 SSBP05455 408 aaKnown RBP eCLIP17.29■□□□□ 0.36
CTTN-215ENST00000533931 CKBP12277 381 aa17.29■□□□□ 0.36
CTTN-215ENST00000533931 SELPP16109 830 aa17.29■□□□□ 0.36
CTTN-215ENST00000533931 RFC2P35250 354 aa17.29■□□□□ 0.36
CTTN-215ENST00000533931 MRPS6P82932 125 aaKnown RBP17.29■□□□□ 0.36
CTTN-215ENST00000533931 MKRN4PQ13434 485 aaPredicted RBP17.29■□□□□ 0.36
CTTN-215ENST00000533931 PPP2R5AQ15172 486 aa17.29■□□□□ 0.36
CTTN-215ENST00000533931 ARSHQ5FYA8 562 aa17.29■□□□□ 0.36
CTTN-215ENST00000533931 DNAJB3Q8WWF6 145 aa17.29■□□□□ 0.36
CTTN-215ENST00000533931 RUSC1Q9BVN2 902 aa17.29■□□□□ 0.36
CTTN-215ENST00000533931 PANK2Q9BZ23 570 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms