RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 BORCS6Q96GS4 357 aa21.04■□□□□ 0.96
CAPN1-226ENST00000533820 KCNQ5Q9NR82 932 aa21.04■□□□□ 0.96
CAPN1-226ENST00000533820 MEIS2O14770 477 aa21.04■□□□□ 0.96
CAPN1-226ENST00000533820 ZNF76P36508 570 aa21.04■□□□□ 0.96
CAPN1-226ENST00000533820 ITGB3BPQ13352 177 aaPredicted RBP21.04■□□□□ 0.96
CAPN1-226ENST00000533820 PPP1R18Q6NYC8 613 aa21.04■□□□□ 0.96
CAPN1-226ENST00000533820 B4GALNT4Q76KP1 1039 aa21.04■□□□□ 0.96
CAPN1-226ENST00000533820 SPICE1Q8N0Z3 855 aa21.04■□□□□ 0.96
CAPN1-226ENST00000533820 MYCBPAPQ8TBZ2 947 aa21.04■□□□□ 0.96
CAPN1-226ENST00000533820 VEZTQ9HBM0 779 aa21.04■□□□□ 0.96
CAPN1-226ENST00000533820 LRRC4BQ9NT99 713 aa21.04■□□□□ 0.96
CAPN1-226ENST00000533820 CHORDC1Q9UHD1 332 aaPredicted RBP21.04■□□□□ 0.96
CAPN1-226ENST00000533820 TBCAO75347 108 aaKnown RBP21.03■□□□□ 0.96
CAPN1-226ENST00000533820 HSPA9P38646 679 aaKnown RBP21.03■□□□□ 0.96
CAPN1-226ENST00000533820 DPY19L2P1Q6NXN4 242 aa21.03■□□□□ 0.96
CAPN1-226ENST00000533820 NOVA2Q9UNW9 492 aaKnown RBP21.03■□□□□ 0.96
CAPN1-226ENST00000533820 SMIM23A6NLE4 172 aa21.03■□□□□ 0.96
CAPN1-226ENST00000533820 GALCP54803 685 aa21.03■□□□□ 0.96
CAPN1-226ENST00000533820 EPHA7Q15375 998 aa21.03■□□□□ 0.96
CAPN1-226ENST00000533820 ARHGAP44Q17R89 818 aa21.03■□□□□ 0.96
CAPN1-226ENST00000533820 C15orf52Q6ZUT6 534 aaKnown RBP21.03■□□□□ 0.96
CAPN1-226ENST00000533820 SCFD2Q8WU76 684 aa21.03■□□□□ 0.96
CAPN1-226ENST00000533820 SLC35C1Q96A29 364 aa21.03■□□□□ 0.96
CAPN1-226ENST00000533820 TMEM59LQ9UK28 342 aa21.03■□□□□ 0.96
CAPN1-226ENST00000533820 FGGP02679 453 aa21.03■□□□□ 0.96
CAPN1-226ENST00000533820 HLA-DOAP06340 250 aa21.03■□□□□ 0.96
CAPN1-226ENST00000533820 ZNF844Q08AG5 666 aa21.03■□□□□ 0.96
CAPN1-226ENST00000533820 TRMT1LQ7Z2T5 733 aaKnown RBP21.03■□□□□ 0.96
CAPN1-226ENST00000533820 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.03■□□□□ 0.962e-7■■■□□ 16.5
CAPN1-226ENST00000533820 TMBIM4Q9HC24 238 aa21.03■□□□□ 0.96
CAPN1-226ENST00000533820 GOPCQ9HD26 462 aa21.03■□□□□ 0.96
CAPN1-226ENST00000533820 ASTN1O14525 1302 aa21.02■□□□□ 0.96
CAPN1-226ENST00000533820 EML1O00423 815 aa21.02■□□□□ 0.96
CAPN1-226ENST00000533820 SKAP2O75563 359 aaPredicted RBP21.02■□□□□ 0.96
CAPN1-226ENST00000533820 SSR1P43307 286 aaKnown RBP21.02■□□□□ 0.96
CAPN1-226ENST00000533820 CYP2J2P51589 502 aa21.02■□□□□ 0.96
CAPN1-226ENST00000533820 DHX9Q08211 1270 aaKnown RBP21.02■□□□□ 0.96
CAPN1-226ENST00000533820 FRMD5Q7Z6J6 570 aa21.02■□□□□ 0.96
CAPN1-226ENST00000533820 TPH2Q8IWU9 490 aa21.02■□□□□ 0.96
CAPN1-226ENST00000533820 MREGQ8N565 214 aa21.02■□□□□ 0.96
CAPN1-226ENST00000533820 ZC3H12CQ9C0D7 883 aaKnown RBP21.02■□□□□ 0.96
CAPN1-226ENST00000533820 DNAJC18Q9H819 358 aa21.02■□□□□ 0.96
CAPN1-226ENST00000533820 SPDYE3A6NKU9 549 aa21.02■□□□□ 0.96
CAPN1-226ENST00000533820 MEFVO15553 781 aaPredicted RBP21.02■□□□□ 0.96
CAPN1-226ENST00000533820 TRIM49P0CI25 452 aa21.02■□□□□ 0.96
CAPN1-226ENST00000533820 TRIM49CP0CI26 452 aa21.02■□□□□ 0.96
CAPN1-226ENST00000533820 NF2P35240 595 aa21.02■□□□□ 0.96
CAPN1-226ENST00000533820 RDXP35241 583 aaKnown RBP21.02■□□□□ 0.96
CAPN1-226ENST00000533820 SPIRE1Q08AE8 756 aa21.02■□□□□ 0.96
CAPN1-226ENST00000533820 C11orf91Q3C1V1 193 aa21.02■□□□□ 0.96
CAPN1-226ENST00000533820 KIAA0825Q8IV33 1275 aa21.02■□□□□ 0.96
CAPN1-226ENST00000533820 SIX2Q9NPC8 291 aa21.02■□□□□ 0.96
CAPN1-226ENST00000533820 ATP8A1Q9Y2Q0 1164 aa21.02■□□□□ 0.96
CAPN1-226ENST00000533820 HMGB1P1B2RPK0 211 aaPredicted RBP21.01■□□□□ 0.95
CAPN1-226ENST00000533820 CALUO43852 315 aaPredicted RBP21.01■□□□□ 0.95
CAPN1-226ENST00000533820 EVI5O60447 810 aa21.01■□□□□ 0.95
CAPN1-226ENST00000533820 NEDD9Q14511 834 aa21.01■□□□□ 0.95
CAPN1-226ENST00000533820 VPS36Q86VN1 386 aa21.01■□□□□ 0.95
CAPN1-226ENST00000533820 MYCT1Q8N699 235 aa21.01■□□□□ 0.95
CAPN1-226ENST00000533820 ERMNQ8TAM6 284 aa21.01■□□□□ 0.95
CAPN1-226ENST00000533820 UHMK1Q8TAS1 419 aaKnown RBP21.01■□□□□ 0.95
CAPN1-226ENST00000533820 ETNPPLQ8TBG4 499 aa21.01■□□□□ 0.95
CAPN1-226ENST00000533820 PBKQ96KB5 322 aa21.01■□□□□ 0.95
CAPN1-226ENST00000533820 BUB1BO60566 1050 aaPredicted RBP21.01■□□□□ 0.95
CAPN1-226ENST00000533820 LRRN2O75325 713 aa21.01■□□□□ 0.95
CAPN1-226ENST00000533820 LLGL1Q15334 1064 aa21.01■□□□□ 0.95
CAPN1-226ENST00000533820 CHADLQ6NUI6 762 aa21.01■□□□□ 0.95
CAPN1-226ENST00000533820 ARHGAP27Q6ZUM4 889 aa21.01■□□□□ 0.95
CAPN1-226ENST00000533820 SLFN12Q8IYM2 578 aa21.01■□□□□ 0.95
CAPN1-226ENST00000533820 IFI16Q16666 785 aaKnown RBP21.01■□□□□ 0.95
CAPN1-226ENST00000533820 KRT71Q3SY84 523 aa21.01■□□□□ 0.95
CAPN1-226ENST00000533820 AADACL2Q6P093 401 aa21.01■□□□□ 0.95
CAPN1-226ENST00000533820 PPP4R3CPQ6ZMV5 832 aa21.01■□□□□ 0.95
CAPN1-226ENST00000533820 MAEAQ7L5Y9 396 aa21.01■□□□□ 0.95
CAPN1-226ENST00000533820 SYT2Q8N9I0 419 aaPredicted RBP21.01■□□□□ 0.95
CAPN1-226ENST00000533820 PPP1R9AQ9ULJ8 1098 aa21.01■□□□□ 0.95
CAPN1-226ENST00000533820 TRAF3IP3Q9Y228 551 aa21.01■□□□□ 0.95
CAPN1-226ENST00000533820 IGSF9BQ9UPX0 1349 aa21■□□□□ 0.95
CAPN1-226ENST00000533820 PLCB1Q9NQ66 1216 aa21■□□□□ 0.95
CAPN1-226ENST00000533820 CNOT8Q9UFF9 292 aaKnown RBP21■□□□□ 0.95
CAPN1-226ENST00000533820 KLHL33A6NCF5 533 aa21■□□□□ 0.95
CAPN1-226ENST00000533820 MSH4O15457 936 aa21■□□□□ 0.95
CAPN1-226ENST00000533820 GYS1P13807 737 aa21■□□□□ 0.95
CAPN1-226ENST00000533820 MKRN4PQ13434 485 aaPredicted RBP21■□□□□ 0.95
CAPN1-226ENST00000533820 PALB2Q86YC2 1186 aa21■□□□□ 0.95
CAPN1-226ENST00000533820 LNX1Q8TBB1 728 aaPredicted RBP21■□□□□ 0.95
CAPN1-226ENST00000533820 MDM1Q8TC05 714 aa21■□□□□ 0.95
CAPN1-226ENST00000533820 GLG1Q92896 1179 aa21■□□□□ 0.95
CAPN1-226ENST00000533820 TAS2R14Q9NYV8 317 aa21■□□□□ 0.95
CAPN1-226ENST00000533820 RABGAP1Q9Y3P9 1069 aa21■□□□□ 0.95
CAPN1-226ENST00000533820 PLIN4Q96Q06 1357 aa21■□□□□ 0.95
CAPN1-226ENST00000533820 DDTLA6NHG4 134 aaPredicted RBP20.99■□□□□ 0.95
CAPN1-226ENST00000533820 TMEM110-MUSTN1A8MSY1 372 aa20.99■□□□□ 0.95
CAPN1-226ENST00000533820 KIF3CO14782 793 aa20.99■□□□□ 0.95
CAPN1-226ENST00000533820 RPA1P27694 616 aa20.99■□□□□ 0.95
CAPN1-226ENST00000533820 CCNHP51946 323 aaPredicted RBP20.99■□□□□ 0.95
CAPN1-226ENST00000533820 MAGOHP61326 146 aaKnown RBP20.99■□□□□ 0.95
CAPN1-226ENST00000533820 IFFO1Q0D2I5 559 aa20.99■□□□□ 0.95
CAPN1-226ENST00000533820 FOXR2Q6PJQ5 311 aa20.99■□□□□ 0.95
CAPN1-226ENST00000533820 SLC35G2Q8TBE7 412 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms