RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 TMEM117Q9H0C3 514 aa12.28□□□□□ -0.44
CSDE1-215ENST00000533818 RGS18Q9NS28 235 aa12.28□□□□□ -0.44
CSDE1-215ENST00000533818 MRPL11Q9Y3B7 192 aaKnown RBP12.28□□□□□ -0.44
CSDE1-215ENST00000533818 DMXL2Q8TDJ6 3036 aa12.28□□□□□ -0.44
CSDE1-215ENST00000533818 C9IYK1 514 aa12.27□□□□□ -0.45
CSDE1-215ENST00000533818 SPINK2P20155 84 aa12.27□□□□□ -0.45
CSDE1-215ENST00000533818 NRLP54845 237 aa12.27□□□□□ -0.45
CSDE1-215ENST00000533818 IGBP1P78318 339 aa12.27□□□□□ -0.45
CSDE1-215ENST00000533818 SP4Q02446 784 aa12.27□□□□□ -0.45
CSDE1-215ENST00000533818 NEDD9Q14511 834 aa12.27□□□□□ -0.45
CSDE1-215ENST00000533818 CDC37Q16543 378 aaPredicted RBP12.27□□□□□ -0.45
CSDE1-215ENST00000533818 AASDHQ4L235 1098 aaPredicted RBP12.27□□□□□ -0.45
CSDE1-215ENST00000533818 PPFIBP1Q86W92 1011 aa12.27□□□□□ -0.45
CSDE1-215ENST00000533818 SLC39A11Q8N1S5 342 aa12.27□□□□□ -0.45
CSDE1-215ENST00000533818 IL31RAQ8NI17 732 aa12.27□□□□□ -0.45
CSDE1-215ENST00000533818 BBXQ8WY36 941 aaPredicted RBP12.27□□□□□ -0.45
CSDE1-215ENST00000533818 APPBP2Q92624 585 aa12.27□□□□□ -0.45
CSDE1-215ENST00000533818 ZBTB10Q96DT7 871 aa12.27□□□□□ -0.45
CSDE1-215ENST00000533818 CASD1Q96PB1 797 aa12.27□□□□□ -0.45
CSDE1-215ENST00000533818 DDX23Q9BUQ8 820 aaKnown RBP12.27□□□□□ -0.45
CSDE1-215ENST00000533818 ADAM33Q9BZ11 813 aa12.27□□□□□ -0.45
CSDE1-215ENST00000533818 CELF4Q9BZC1 486 aaKnown RBP12.27□□□□□ -0.45
CSDE1-215ENST00000533818 TMEM161AQ9NX61 479 aa12.27□□□□□ -0.45
CSDE1-215ENST00000533818 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.27□□□□□ -0.45
CSDE1-215ENST00000533818 TELO2Q9Y4R8 837 aa12.27□□□□□ -0.45
CSDE1-215ENST00000533818 DENND4AQ7Z401 1863 aa12.27□□□□□ -0.45
CSDE1-215ENST00000533818 MARK3P27448 753 aa12.26□□□□□ -0.45
CSDE1-215ENST00000533818 CCND2P30279 289 aa12.26□□□□□ -0.45
CSDE1-215ENST00000533818 GPC5P78333 572 aa12.26□□□□□ -0.45
CSDE1-215ENST00000533818 FOXC1Q12948 553 aa12.26□□□□□ -0.45
CSDE1-215ENST00000533818 GIT2Q14161 759 aa12.26□□□□□ -0.45
CSDE1-215ENST00000533818 PGM5Q15124 567 aa12.26□□□□□ -0.45
CSDE1-215ENST00000533818 ZBTB41Q5SVQ8 909 aa12.26□□□□□ -0.45
CSDE1-215ENST00000533818 PSAPL1Q6NUJ1 521 aa12.26□□□□□ -0.45
CSDE1-215ENST00000533818 FAM43BQ6ZT52 329 aaPredicted RBP12.26□□□□□ -0.45
CSDE1-215ENST00000533818 STOX1Q6ZVD7 989 aa12.26□□□□□ -0.45
CSDE1-215ENST00000533818 LRRC43Q8N309 656 aa12.26□□□□□ -0.45
CSDE1-215ENST00000533818 KIF1BPQ96EK5 621 aa12.26□□□□□ -0.45
CSDE1-215ENST00000533818 UBA5Q9GZZ9 404 aa12.26□□□□□ -0.45
CSDE1-215ENST00000533818 NAPBQ9H115 298 aa12.26□□□□□ -0.45
CSDE1-215ENST00000533818 CPVLQ9H3G5 476 aa12.26□□□□□ -0.45
CSDE1-215ENST00000533818 WDR6Q9NNW5 1121 aaKnown RBP12.26□□□□□ -0.45
CSDE1-215ENST00000533818 PRMT8Q9NR22 394 aaPredicted RBP12.26□□□□□ -0.45
CSDE1-215ENST00000533818 PCDHA1Q9Y5I3 950 aa12.26□□□□□ -0.45
CSDE1-215ENST00000533818 IRAK3Q9Y616 596 aa12.26□□□□□ -0.45
CSDE1-215ENST00000533818 FNDC1Q4ZHG4 1894 aaPredicted RBP12.25□□□□□ -0.45
CSDE1-215ENST00000533818 GOLGA8HP0CJ92 632 aa12.25□□□□□ -0.45
CSDE1-215ENST00000533818 LAMP2P13473 410 aa12.25□□□□□ -0.45
CSDE1-215ENST00000533818 CD72P21854 359 aa12.25□□□□□ -0.45
CSDE1-215ENST00000533818 HSD17B4P51659 736 aa12.25□□□□□ -0.45
CSDE1-215ENST00000533818 FAM189BP81408 668 aa12.25□□□□□ -0.45
CSDE1-215ENST00000533818 PRKCQQ04759 706 aa12.25□□□□□ -0.45
CSDE1-215ENST00000533818 CTDSPL2Q05D32 466 aa12.25□□□□□ -0.45
CSDE1-215ENST00000533818 HTR4Q13639 388 aa12.25□□□□□ -0.45
CSDE1-215ENST00000533818 SIM2Q14190 667 aaPredicted RBP12.25□□□□□ -0.45
CSDE1-215ENST00000533818 MLF2Q15773 248 aaPredicted RBP12.25□□□□□ -0.45
CSDE1-215ENST00000533818 SLC44A4Q53GD3 710 aa12.25□□□□□ -0.45
CSDE1-215ENST00000533818 TRMT2AQ8IZ69 625 aaKnown RBP12.25□□□□□ -0.45
CSDE1-215ENST00000533818 ABI1Q8IZP0 508 aa12.25□□□□□ -0.45
CSDE1-215ENST00000533818 ST13P5Q8NFI4 369 aaPredicted RBP12.25□□□□□ -0.45
CSDE1-215ENST00000533818 GATA6Q92908 595 aa12.25□□□□□ -0.45
CSDE1-215ENST00000533818 CLDN23Q96B33 292 aa12.25□□□□□ -0.45
CSDE1-215ENST00000533818 TMEM169Q96HH4 297 aa12.25□□□□□ -0.45
CSDE1-215ENST00000533818 ZBP1Q9H171 429 aa12.25□□□□□ -0.45
CSDE1-215ENST00000533818 ELAC1Q9H777 363 aaKnown RBP12.25□□□□□ -0.45
CSDE1-215ENST00000533818 LTB4R2Q9NPC1 389 aa12.25□□□□□ -0.45
CSDE1-215ENST00000533818 NUMBLQ9Y6R0 609 aa12.25□□□□□ -0.45
CSDE1-215ENST00000533818 IGSF10Q6WRI0 2623 aa12.25□□□□□ -0.45
CSDE1-215ENST00000533818 EIF4E1BA6NMX2 242 aaKnown RBP12.24□□□□□ -0.45
CSDE1-215ENST00000533818 SPATA31C2B4DYI2 1134 aa12.24□□□□□ -0.45
CSDE1-215ENST00000533818 NT5C1B-RDH14C9J2C7 533 aa12.24□□□□□ -0.45
CSDE1-215ENST00000533818 ANHXE9PGG2 379 aa12.24□□□□□ -0.45
CSDE1-215ENST00000533818 M0R2C6 588 aa12.24□□□□□ -0.45
CSDE1-215ENST00000533818 NCAM2O15394 837 aa12.24□□□□□ -0.45
CSDE1-215ENST00000533818 HOXA2O43364 376 aa12.24□□□□□ -0.45
CSDE1-215ENST00000533818 CLUHO75153 1309 aa12.24□□□□□ -0.45
CSDE1-215ENST00000533818 RPS6KA5O75582 802 aa12.24□□□□□ -0.45
CSDE1-215ENST00000533818 CTSAP10619 480 aa12.24□□□□□ -0.45
CSDE1-215ENST00000533818 KLRC2P26717 231 aa12.24□□□□□ -0.45
CSDE1-215ENST00000533818 ALDH7A1P49419 539 aaKnown RBP12.24□□□□□ -0.45
CSDE1-215ENST00000533818 METAP2P50579 478 aaKnown RBP eCLIP12.24□□□□□ -0.45
CSDE1-215ENST00000533818 KRT76Q01546 638 aa12.24□□□□□ -0.45
CSDE1-215ENST00000533818 GNPTABQ3T906 1256 aa12.24□□□□□ -0.45
CSDE1-215ENST00000533818 STPG1Q5TH74 334 aa12.24□□□□□ -0.45
CSDE1-215ENST00000533818 CEP85Q6P2H3 762 aa12.24□□□□□ -0.45
CSDE1-215ENST00000533818 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.24□□□□□ -0.45
CSDE1-215ENST00000533818 C12orf50Q8NA57 414 aaPredicted RBP12.24□□□□□ -0.45
CSDE1-215ENST00000533818 KLHL5Q96PQ7 755 aa12.24□□□□□ -0.45
CSDE1-215ENST00000533818 LSM14BQ9BX40 385 aaKnown RBP12.24□□□□□ -0.45
CSDE1-215ENST00000533818 RXFP3Q9NSD7 469 aa12.24□□□□□ -0.45
CSDE1-215ENST00000533818 WASF3Q9UPY6 502 aa12.24□□□□□ -0.45
CSDE1-215ENST00000533818 GINS2Q9Y248 185 aa12.24□□□□□ -0.45
CSDE1-215ENST00000533818 AKAP13Q12802 2813 aa12.24□□□□□ -0.45
CSDE1-215ENST00000533818 KDM3AQ9Y4C1 1321 aa12.23□□□□□ -0.45
CSDE1-215ENST00000533818 CCDC195A0A1B0GUA6 201 aa12.23□□□□□ -0.45
CSDE1-215ENST00000533818 RRN3P2A6NIE6 340 aa12.23□□□□□ -0.45
CSDE1-215ENST00000533818 RNF113AO15541 343 aaKnown RBP12.23□□□□□ -0.45
CSDE1-215ENST00000533818 SNHG28P0DPA3 235 aa12.23□□□□□ -0.45
CSDE1-215ENST00000533818 HOXA13P31271 388 aaPredicted RBP12.23□□□□□ -0.45
CSDE1-215ENST00000533818 TCF7P36402 384 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms