RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 POLGP54098 1239 aaPredicted RBP13.25□□□□□ -0.29
COMMD9-208ENST00000533643 MDM2Q00987 491 aaPredicted RBP13.25□□□□□ -0.29
COMMD9-208ENST00000533643 TBC1D8BQ0IIM8 1120 aa13.25□□□□□ -0.29
COMMD9-208ENST00000533643 GDF6Q6KF10 455 aaPredicted RBP13.25□□□□□ -0.29
COMMD9-208ENST00000533643 MTHFD1LQ6UB35 978 aa13.25□□□□□ -0.29
COMMD9-208ENST00000533643 SLC39A5Q6ZMH5 540 aa13.25□□□□□ -0.29
COMMD9-208ENST00000533643 UBE2Q1Q7Z7E8 422 aa13.25□□□□□ -0.29
COMMD9-208ENST00000533643 SEZ6LQ9BYH1 1024 aa13.25□□□□□ -0.29
COMMD9-208ENST00000533643 TNMDQ9H2S6 317 aa13.25□□□□□ -0.29
COMMD9-208ENST00000533643 C11orf49Q9H6J7 331 aa13.25□□□□□ -0.29
COMMD9-208ENST00000533643 XPNPEP1Q9NQW7 623 aa13.25□□□□□ -0.29
COMMD9-208ENST00000533643 DNAH12Q6ZR08 3092 aa13.24□□□□□ -0.29
COMMD9-208ENST00000533643 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.24□□□□□ -0.29
COMMD9-208ENST00000533643 MAGEB2O15479 319 aa13.24□□□□□ -0.29
COMMD9-208ENST00000533643 TREHO43280 583 aa13.24□□□□□ -0.29
COMMD9-208ENST00000533643 DGAT1O75907 488 aa13.24□□□□□ -0.29
COMMD9-208ENST00000533643 GNAT1P11488 350 aa13.24□□□□□ -0.29
COMMD9-208ENST00000533643 CASP1P29466 404 aa13.24□□□□□ -0.29
COMMD9-208ENST00000533643 SOX10P56693 466 aa13.24□□□□□ -0.29
COMMD9-208ENST00000533643 AMPD3Q01432 767 aa13.24□□□□□ -0.29
COMMD9-208ENST00000533643 RAD51AP2Q09MP3 1159 aa13.24□□□□□ -0.29
COMMD9-208ENST00000533643 MKRN4PQ13434 485 aaPredicted RBP13.24□□□□□ -0.29
COMMD9-208ENST00000533643 EMC2Q15006 297 aa13.24□□□□□ -0.29
COMMD9-208ENST00000533643 KANK3Q6NY19 840 aa13.24□□□□□ -0.29
COMMD9-208ENST00000533643 RUFY4Q6ZNE9 571 aa13.24□□□□□ -0.29
COMMD9-208ENST00000533643 NECAB2Q7Z6G3 386 aa13.24□□□□□ -0.29
COMMD9-208ENST00000533643 ELOA2Q8IYF1 753 aaPredicted RBP13.24□□□□□ -0.29
COMMD9-208ENST00000533643 SLC7A3Q8WY07 619 aa13.24□□□□□ -0.29
COMMD9-208ENST00000533643 DNAJC19Q96DA6 116 aa13.24□□□□□ -0.29
COMMD9-208ENST00000533643 CTAGE1Q96RT6 745 aa13.24□□□□□ -0.29
COMMD9-208ENST00000533643 C7orf25Q9BPX7 421 aa13.24□□□□□ -0.29
COMMD9-208ENST00000533643 TRPV6Q9H1D0 765 aa13.24□□□□□ -0.29
COMMD9-208ENST00000533643 ATP6V0A4Q9HBG4 840 aa13.24□□□□□ -0.29
COMMD9-208ENST00000533643 POLD4Q9HCU8 107 aa13.24□□□□□ -0.29
COMMD9-208ENST00000533643 BMP2KQ9NSY1 1161 aaPredicted RBP13.24□□□□□ -0.29
COMMD9-208ENST00000533643 KCND2Q9NZV8 630 aa13.24□□□□□ -0.29
COMMD9-208ENST00000533643 TUBE1Q9UJT0 475 aa13.24□□□□□ -0.29
COMMD9-208ENST00000533643 PRR29P0C7W0 189 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 GUCY2CP25092 1073 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 ATN1P54259 1190 aaPredicted RBP13.23□□□□□ -0.29
COMMD9-208ENST00000533643 DRP2Q13474 957 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 CUL4BQ13620 913 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 GIT2Q14161 759 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 SNX17Q15036 470 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 EFCAB12Q6NXP0 572 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 CNNM4Q6P4Q7 775 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 MAEAQ7L5Y9 396 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 DYMQ7RTS9 669 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 EXOC8Q8IYI6 725 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 KIAA0319LQ8IZA0 1049 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 TNS4Q8IZW8 715 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 DAW1Q8N136 415 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 LRRC71Q8N4P6 559 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 METTL13Q8N6R0 699 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 LINC01465Q8N7H1 131 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 MCPH1Q8NEM0 835 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 DDX12PQ92771 950 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 TMEM143Q96AN5 459 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 JPH2Q9BR39 696 aaPredicted RBP13.23□□□□□ -0.29
COMMD9-208ENST00000533643 REEP2Q9BRK0 252 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 TRIM9Q9C026 710 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 LRRC27Q9C0I9 530 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 BLZF1Q9H2G9 400 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 CLSTN2Q9H4D0 955 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 SUGCTQ9HAC7 445 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 TRMT13Q9NUP7 481 aaKnown RBP13.23□□□□□ -0.29
COMMD9-208ENST00000533643 PCDHA2Q9Y5H9 948 aa13.23□□□□□ -0.29
COMMD9-208ENST00000533643 RSPH10B2B2RC85 870 aa13.22□□□□□ -0.29
COMMD9-208ENST00000533643 GTPBP6O43824 516 aaPredicted RBP13.22□□□□□ -0.29
COMMD9-208ENST00000533643 B4GALT4O60513 344 aa13.22□□□□□ -0.29
COMMD9-208ENST00000533643 HIP1RO75146 1068 aa13.22□□□□□ -0.29
COMMD9-208ENST00000533643 KRT18P05783 430 aaKnown RBP13.22□□□□□ -0.29
COMMD9-208ENST00000533643 RSPH10BP0C881 870 aa13.22□□□□□ -0.29
COMMD9-208ENST00000533643 CYP2C9P11712 490 aa13.22□□□□□ -0.29
COMMD9-208ENST00000533643 ARL2P36404 184 aa13.22□□□□□ -0.29
COMMD9-208ENST00000533643 CLCN3P51790 818 aa13.22□□□□□ -0.29
COMMD9-208ENST00000533643 CACNB1Q02641 598 aaPredicted RBP13.22□□□□□ -0.29
COMMD9-208ENST00000533643 MAPK7Q13164 816 aa13.22□□□□□ -0.29
COMMD9-208ENST00000533643 PNOCQ13519 176 aa13.22□□□□□ -0.29
COMMD9-208ENST00000533643 CAMK4Q16566 473 aa13.22□□□□□ -0.29
COMMD9-208ENST00000533643 PTGISQ16647 500 aa13.22□□□□□ -0.29
COMMD9-208ENST00000533643 FAM102BQ5T8I3 360 aa13.22□□□□□ -0.29
COMMD9-208ENST00000533643 C1orf53Q5VUE5 145 aa13.22□□□□□ -0.29
COMMD9-208ENST00000533643 SERINC5Q86VE9 423 aa13.22□□□□□ -0.29
COMMD9-208ENST00000533643 RETREG2Q8NC44 543 aa13.22□□□□□ -0.29
COMMD9-208ENST00000533643 TIPINQ9BVW5 301 aa13.22□□□□□ -0.29
COMMD9-208ENST00000533643 GPRC5CQ9NQ84 441 aa13.22□□□□□ -0.29
COMMD9-208ENST00000533643 ARID2Q68CP9 1835 aa13.21□□□□□ -0.29
COMMD9-208ENST00000533643 SMIM35A0A1B0GVV1 85 aa13.21□□□□□ -0.29
COMMD9-208ENST00000533643 CCDC85CA6NKD9 419 aa13.21□□□□□ -0.29
COMMD9-208ENST00000533643 GAS2O43903 313 aaKnown RBP13.21□□□□□ -0.29
COMMD9-208ENST00000533643 CD4P01730 458 aa13.21□□□□□ -0.29
COMMD9-208ENST00000533643 MYL1P05976 194 aa13.21□□□□□ -0.29
COMMD9-208ENST00000533643 DNM2P50570 870 aa13.21□□□□□ -0.29
COMMD9-208ENST00000533643 ASIC1P78348 528 aa13.21□□□□□ -0.29
COMMD9-208ENST00000533643 DPYDQ12882 1025 aa13.21□□□□□ -0.29
COMMD9-208ENST00000533643 POSTNQ15063 836 aa13.21□□□□□ -0.29
COMMD9-208ENST00000533643 LRRC26Q2I0M4 334 aa13.21□□□□□ -0.29
COMMD9-208ENST00000533643 KLHL40Q2TBA0 621 aa13.21□□□□□ -0.29
COMMD9-208ENST00000533643 SKOR2Q2VWA4 1001 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms