RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 SH2D3CQ8N5H7 860 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 ANKRD27Q96NW4 1050 aa8.39□□□□□ -1.07
CSRP1-218ENST00000533402 LBHD1Q9BQE6 289 aaPredicted RBP8.39□□□□□ -1.07
CSRP1-218ENST00000533402 ANGEL1Q9UNK9 670 aaKnown RBP8.39□□□□□ -1.07
CSRP1-218ENST00000533402 TTI1O43156 1089 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 SLC4A1P02730 911 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 ZCCHC18P0CG32 403 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 SRGAP2BP0DMP2 458 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 PDHBP11177 359 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 ACTN1P12814 892 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 POLR2BP30876 1174 aaKnown RBP8.38□□□□□ -1.07
CSRP1-218ENST00000533402 TMPRSS15P98073 1019 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 KRT31Q15323 416 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 ADCK5Q3MIX3 580 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 SGO2Q562F6 1265 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 HAUS3Q68CZ6 603 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 SRRM1Q8IYB3 904 aaKnown RBP8.38□□□□□ -1.07
CSRP1-218ENST00000533402 FNBP1Q96RU3 617 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 PRMT1Q99873 361 aaKnown RBP8.38□□□□□ -1.07
CSRP1-218ENST00000533402 STK25O00506 426 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 DAPK3O43293 454 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 HLA-DPA1P20036 260 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 HERC4Q5GLZ8 1057 aaPredicted RBP8.38□□□□□ -1.07
CSRP1-218ENST00000533402 RINT1Q6NUQ1 792 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 NUDT18Q6ZVK8 323 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 NLRX1Q86UT6 975 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 WDR17Q8IZU2 1322 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 SH3TC1Q8TE82 1336 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 MAGEB6P1A0A0J9YX57 407 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 PHF20L1A8MW92 1017 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 TAF4O00268 1085 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 CCNT1O60563 726 aaKnown RBP8.38□□□□□ -1.07
CSRP1-218ENST00000533402 SAT1P21673 171 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 MARK3P27448 753 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 PLA2G4AP47712 749 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 ARFIP2P53365 341 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 MTHFSDQ2M296 383 aaKnown RBP8.38□□□□□ -1.07
CSRP1-218ENST00000533402 SLC9C2Q5TAH2 1124 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 TUBGCP2Q9BSJ2 902 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 OSBPL5Q9H0X9 879 aaPredicted RBP8.38□□□□□ -1.07
CSRP1-218ENST00000533402 SMYD2Q9NRG4 433 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 CHPF2Q9P2E5 772 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 KDRP35968 1356 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 AHCYL1O43865 530 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 FAM47CQ5HY64 1035 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 MRPS26Q9BYN8 205 aaKnown RBP8.38□□□□□ -1.07
CSRP1-218ENST00000533402 TBC1D7Q9P0N9 293 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 HPCAL4Q9UM19 191 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 ROBO2Q9HCK4 1378 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 TNNC2P02585 160 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 NPR1P16066 1061 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 KRT76Q01546 638 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 ROR2Q01974 943 aaKnown RBP8.38□□□□□ -1.07
CSRP1-218ENST00000533402 RUBCNQ92622 972 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 CYP4F11Q9HBI6 524 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 PCDHA5Q9Y5H7 936 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 PCDHA13Q9Y5I0 950 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 MYH6P13533 1939 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 PCP4L1A6NKN8 68 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 CCDC188H7C350 402 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 M0R3G1 203 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 XPO1O14980 1071 aaKnown RBP8.38□□□□□ -1.07
CSRP1-218ENST00000533402 PPIP5K2O43314 1243 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 UFL1O94874 794 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 ERFP50548 548 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.38□□□□□ -1.07
CSRP1-218ENST00000533402 PRPF18Q99633 342 aaKnown RBP8.38□□□□□ -1.07
CSRP1-218ENST00000533402 BTG4Q9NY30 223 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 S100A9P06702 114 aaKnown RBP8.38□□□□□ -1.07
CSRP1-218ENST00000533402 PCP11498 1178 aaKnown RBP8.38□□□□□ -1.07
CSRP1-218ENST00000533402 SERPINB8P50452 374 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 LRRC14Q15048 493 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 DYMQ7RTS9 669 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 FBXL13Q8NEE6 735 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 ZC3H15Q8WU90 426 aaKnown RBP8.38□□□□□ -1.07
CSRP1-218ENST00000533402 MPP4Q96JB8 637 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 MMADHCQ9H3L0 296 aaPredicted RBP8.38□□□□□ -1.07
CSRP1-218ENST00000533402 USP40Q9NVE5 1235 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 ATAD3AQ9NVI7 634 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 LMCD1Q9NZU5 365 aa8.38□□□□□ -1.07
CSRP1-218ENST00000533402 VAMP4O75379 141 aa8.37□□□□□ -1.07
CSRP1-218ENST00000533402 ARHGDIAP52565 204 aa8.37□□□□□ -1.07
CSRP1-218ENST00000533402 TTC17Q96AE7 1141 aa8.37□□□□□ -1.07
CSRP1-218ENST00000533402 MCRS1Q96EZ8 462 aa8.37□□□□□ -1.07
CSRP1-218ENST00000533402 RPAP3Q9H6T3 665 aaPredicted RBP8.37□□□□□ -1.07
CSRP1-218ENST00000533402 PARVGQ9HBI0 331 aa8.37□□□□□ -1.07
CSRP1-218ENST00000533402 WASHC5Q12768 1159 aa8.37□□□□□ -1.07
CSRP1-218ENST00000533402 KRR1Q13601 381 aaKnown RBP8.37□□□□□ -1.07
CSRP1-218ENST00000533402 ATP11CQ8NB49 1132 aa8.37□□□□□ -1.07
CSRP1-218ENST00000533402 DDI1Q8WTU0 396 aa8.37□□□□□ -1.07
CSRP1-218ENST00000533402 KCNF1Q9H3M0 494 aa8.37□□□□□ -1.07
CSRP1-218ENST00000533402 CCDC134Q9H6E4 229 aa8.37□□□□□ -1.07
CSRP1-218ENST00000533402 IQANK1A0A1B0GTG1 560 aa8.37□□□□□ -1.07
CSRP1-218ENST00000533402 FAM83GA6ND36 823 aa8.37□□□□□ -1.07
CSRP1-218ENST00000533402 SGK1O00141 431 aa8.37□□□□□ -1.07
CSRP1-218ENST00000533402 CCDC22O60826 627 aa8.37□□□□□ -1.07
CSRP1-218ENST00000533402 PATL1Q86TB9 770 aaKnown RBP8.37□□□□□ -1.07
CSRP1-218ENST00000533402 XAGE3Q8WTP9 111 aa8.37□□□□□ -1.07
CSRP1-218ENST00000533402 PRR23D1E9PI22 279 aaPredicted RBP8.37□□□□□ -1.07
CSRP1-218ENST00000533402 IPO5O00410 1097 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms