RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 CDAN1Q8IWY9 1227 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 PALM2Q8IXS6 379 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 C7orf31Q8N865 590 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 NOA1Q8NC60 698 aaKnown RBP13.2□□□□□ -0.3
BDNF-218ENST00000533246 ARHGEF2Q92974 986 aaKnown RBP13.2□□□□□ -0.3
BDNF-218ENST00000533246 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.2□□□□□ -0.3
BDNF-218ENST00000533246 ZHX2Q9Y6X8 837 aa13.2□□□□□ -0.3
BDNF-218ENST00000533246 STXBP3O00186 592 aa13.19□□□□□ -0.3
BDNF-218ENST00000533246 CTNND1O60716 968 aaKnown RBP13.19□□□□□ -0.3
BDNF-218ENST00000533246 RXRBP28702 533 aa13.19□□□□□ -0.3
BDNF-218ENST00000533246 GGCXP38435 758 aa13.19□□□□□ -0.3
BDNF-218ENST00000533246 SLC8A3P57103 927 aa13.19□□□□□ -0.3
BDNF-218ENST00000533246 NFIAQ12857 509 aa13.19□□□□□ -0.3
BDNF-218ENST00000533246 BRDTQ58F21 947 aaPredicted RBP13.19□□□□□ -0.3
BDNF-218ENST00000533246 GKAP1Q5VSY0 366 aaPredicted RBP13.19□□□□□ -0.3
BDNF-218ENST00000533246 CCDC13Q8IYE1 715 aa13.19□□□□□ -0.3
BDNF-218ENST00000533246 NLRP4Q96MN2 994 aa13.19□□□□□ -0.3
BDNF-218ENST00000533246 OSBPL9Q96SU4 736 aa13.19□□□□□ -0.3
BDNF-218ENST00000533246 ZNF446Q9NWS9 450 aa13.19□□□□□ -0.3
BDNF-218ENST00000533246 DUSP10Q9Y6W6 482 aa13.19□□□□□ -0.3
BDNF-218ENST00000533246 LRRD1A4D1F6 860 aa13.19□□□□□ -0.3
BDNF-218ENST00000533246 K7ERI5 159 aa13.19□□□□□ -0.3
BDNF-218ENST00000533246 MYBL2P10244 700 aa13.19□□□□□ -0.3
BDNF-218ENST00000533246 MTMR1Q13613 665 aa13.19□□□□□ -0.3
BDNF-218ENST00000533246 ACBD5Q5T8D3 534 aaPredicted RBP13.19□□□□□ -0.3
BDNF-218ENST00000533246 LMBRD2Q68DH5 695 aaPredicted RBP13.19□□□□□ -0.3
BDNF-218ENST00000533246 CIAPIN1Q6FI81 312 aa13.19□□□□□ -0.3
BDNF-218ENST00000533246 INTS9Q9NV88 658 aaKnown RBP13.19□□□□□ -0.3
BDNF-218ENST00000533246 ACSL3O95573 720 aa13.19□□□□□ -0.3
BDNF-218ENST00000533246 PLEKP08567 350 aaPredicted RBP13.19□□□□□ -0.3
BDNF-218ENST00000533246 ATF2P15336 505 aa13.19□□□□□ -0.3
BDNF-218ENST00000533246 DRAP1Q14919 205 aaPredicted RBP13.19□□□□□ -0.3
BDNF-218ENST00000533246 CDC42EP5Q6NZY7 148 aa13.19□□□□□ -0.3
BDNF-218ENST00000533246 RNF207Q6ZRF8 634 aa13.19□□□□□ -0.3
BDNF-218ENST00000533246 KDM4CQ9H3R0 1056 aa13.19□□□□□ -0.3
BDNF-218ENST00000533246 HOMER3Q9NSC5 361 aa13.19□□□□□ -0.3
BDNF-218ENST00000533246 CHORDC1Q9UHD1 332 aaPredicted RBP13.19□□□□□ -0.3
BDNF-218ENST00000533246 CREB3O43889 395 aa13.18□□□□□ -0.3
BDNF-218ENST00000533246 PAX3P23760 479 aa13.18□□□□□ -0.3
BDNF-218ENST00000533246 ADCY2Q08462 1091 aa13.18□□□□□ -0.3
BDNF-218ENST00000533246 CYFIP1Q7L576 1253 aa13.18□□□□□ -0.3
BDNF-218ENST00000533246 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.18□□□□□ -0.3
BDNF-218ENST00000533246 MAP3K14Q99558 947 aa13.18□□□□□ -0.3
BDNF-218ENST00000533246 SPZ1Q9BXG8 430 aa13.18□□□□□ -0.3
BDNF-218ENST00000533246 PPP1R3GB7ZBB8 358 aa13.18□□□□□ -0.3
BDNF-218ENST00000533246 FGFR2P21802 821 aa13.18□□□□□ -0.3
BDNF-218ENST00000533246 MAN1A1P33908 653 aa13.18□□□□□ -0.3
BDNF-218ENST00000533246 SBK1Q52WX2 424 aa13.18□□□□□ -0.3
BDNF-218ENST00000533246 CFAP157Q5JU67 520 aa13.18□□□□□ -0.3
BDNF-218ENST00000533246 SLC4A9Q96Q91 983 aa13.18□□□□□ -0.3
BDNF-218ENST00000533246 EIF2AK1Q9BQI3 630 aaKnown RBP13.18□□□□□ -0.3
BDNF-218ENST00000533246 LRRC1Q9BTT6 524 aa13.18□□□□□ -0.3
BDNF-218ENST00000533246 MLXIPLQ9NP71 852 aa13.18□□□□□ -0.3
BDNF-218ENST00000533246 CAPN11Q9UMQ6 739 aa13.18□□□□□ -0.3
BDNF-218ENST00000533246 MAGED2Q9UNF1 606 aaPredicted RBP13.18□□□□□ -0.3
BDNF-218ENST00000533246 TFRCP02786 760 aaKnown RBP13.18□□□□□ -0.3
BDNF-218ENST00000533246 CCDC92Q53HC0 331 aaPredicted RBP13.18□□□□□ -0.3
BDNF-218ENST00000533246 HP1BP3Q5SSJ5 553 aaPredicted RBP13.18□□□□□ -0.3
BDNF-218ENST00000533246 LMNTD2Q8IXW0 634 aa13.18□□□□□ -0.3
BDNF-218ENST00000533246 B4GALNT2Q8NHY0 566 aa13.18□□□□□ -0.3
BDNF-218ENST00000533246 ABTB1Q969K4 478 aaPredicted RBP13.18□□□□□ -0.3
BDNF-218ENST00000533246 FAM149B1Q96BN6 582 aa13.18□□□□□ -0.3
BDNF-218ENST00000533246 NRBP2Q9NSY0 501 aa13.18□□□□□ -0.3
BDNF-218ENST00000533246 MAD1L1Q9Y6D9 718 aa13.18□□□□□ -0.3
BDNF-218ENST00000533246 RNF8O76064 485 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 STAMBPO95630 424 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 TNNC2P02585 160 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 NCAPHQ15003 741 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 SPATA4Q8NEY3 305 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 CCDC110Q8TBZ0 833 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 CALN1Q9BXU9 219 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 EHD2Q9NZN4 543 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 CEP72Q9P209 647 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 SLC9A1P19634 815 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 AP3B2Q13367 1082 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 ZC2HC1CQ53FD0 456 aaPredicted RBP13.17□□□□□ -0.3
BDNF-218ENST00000533246 FMO2Q99518 471 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 FAM213AQ9BRX8 229 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 TMEM206Q9H813 350 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 FAM217BQ9NTX9 383 aaPredicted RBP13.17□□□□□ -0.3
BDNF-218ENST00000533246 PASKQ96RG2 1323 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 A6NNZ2 444 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 SGK1O00141 431 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 EVX2Q03828 476 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 TUBB8Q3ZCM7 444 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 RINLQ6ZS11 566 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 FAM20AQ96MK3 541 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 LXNQ9BS40 222 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 PARP2Q9UGN5 583 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 HPSEQ9Y251 543 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 USH1CQ9Y6N9 552 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 KIAA1210Q9ULL0 1709 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 FAM205AQ6ZU69 1335 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 H7C0C1 242 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 TAL1P17542 331 aaPredicted RBP13.17□□□□□ -0.3
BDNF-218ENST00000533246 ATP5OP48047 213 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 KCTD2Q14681 263 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 WRNIP1Q96S55 665 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 JMJD4Q9H9V9 463 aa13.17□□□□□ -0.3
BDNF-218ENST00000533246 FBXO28Q9NVF7 368 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms