RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 FAM26FQ5R3K3 315 aa6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 RAD9BQ6WBX8 426 aa6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 LRRC55Q6ZSA7 311 aa6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 TOGARAM2Q6ZUX3 1019 aa6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 CLEC10AQ8IUN9 316 aa6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 CREBRFQ8IUR6 639 aa6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 ZFPM1Q8IX07 1006 aa6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 MYOCDQ8IZQ8 938 aa6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 OGFOD1Q8N543 542 aa6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 CEP112Q8N8E3 955 aa6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 MNS1Q8NEH6 495 aa6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 NEK9Q8TD19 979 aa6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 SYN2Q92777 582 aaPredicted RBP6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 LENG9Q96B70 501 aa6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 DNAJC19Q96DA6 116 aa6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 CSRNP1Q96S65 589 aa6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 POLR3CQ9BUI4 534 aaPredicted RBP6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 TSGA10Q9BZW7 698 aa6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 VPS16Q9H269 839 aa6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 RANBP17Q9H2T7 1088 aaKnown RBP6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 VCPKMTQ9H867 229 aa6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 ARGLU1Q9NWB6 273 aaPredicted RBP6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 KCND2Q9NZV8 630 aa6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 FAM184BQ9ULE4 1060 aa6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 PLAGL2Q9UPG8 496 aa6.33□□□□□ -1.4
ATPAF1-210ENST00000532925 LTBP3Q9NS15 1303 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 SSU72P8A0A1W2PR75 194 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 TTC26A0AVF1 554 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 EIF3CLB5ME19 914 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 BNIP3LO60238 219 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 MARCH6O60337 910 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 NDUFA10O95299 355 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 IPO7O95373 1038 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 GH2P01242 217 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 ASNSP08243 561 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 PLA2G4BP0C869 781 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 FCER1AP12319 257 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 GAP43P17677 238 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 TRIM21P19474 475 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 RPS12P25398 132 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 ANXA13P27216 316 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 SLC16A2P36021 539 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 MTIF2P46199 727 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 SLC12A3P55017 1021 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 TGFB2P61812 414 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 GNG11P61952 73 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 ERVK-24P63145 666 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 RBM10P98175 930 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 ATP2B2Q01814 1243 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 TBC1D8BQ0IIM8 1120 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 TCP10Q12799 353 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 TNFAIP1Q13829 316 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 WHAMMP3Q1A5X7 153 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 BMT2Q1RMZ1 405 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 VWA3BQ502W6 1294 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 ARHGAP29Q52LW3 1261 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 HSP90AA4PQ58FG1 418 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 EFHC2Q5JST6 749 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 ANKRD40Q6AI12 368 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 SLCO4C1Q6ZQN7 724 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 NIPA1Q7RTP0 329 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 KRT26Q7Z3Y9 468 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 ALYREFQ86V81 257 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 Q8N3U1 123 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 MSL3Q8N5Y2 521 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 SYT2Q8N9I0 419 aaPredicted RBP6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 UBXN4Q92575 508 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 LPAR1Q92633 364 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 RABGGTAQ92696 567 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 RPGRIP1Q96KN7 1286 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 PRMT6Q96LA8 375 aaPredicted RBP6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 EIF3CQ99613 913 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 NOC4LQ9BVI4 516 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 ZMYND15Q9H091 742 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 SEMA6BQ9H3T3 888 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 TDRD3Q9H7E2 651 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 TUFT1Q9NNX1 390 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 OLFML3Q9NRN5 406 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 NDFIP2Q9NV92 336 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 SEL1LQ9UBV2 794 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 ZNF70Q9UC06 446 aaPredicted RBP6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 CDC23Q9UJX2 597 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 FEM1BQ9UK73 627 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 ZBTB21Q9ULJ3 1066 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 ZNRF3Q9ULT6 936 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 MYO6Q9UM54 1294 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 TRAF3IP3Q9Y228 551 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 SIK3Q9Y2K2 1263 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 MRPL11Q9Y3B7 192 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 PCDHA2Q9Y5H9 948 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 PCDHAC2Q9Y5I4 1007 aa6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 EPN1Q9Y6I3 576 aaPredicted RBP6.32□□□□□ -1.4
ATPAF1-210ENST00000532925 CNTNAP1P78357 1384 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 DOCK1Q14185 1865 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 COL4A5P29400 1685 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 CTAGE9A4FU28 777 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 C1QTNF9BB2RNN3 333 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 USP17L15C9J2P7 530 aa6.31□□□□□ -1.4
ATPAF1-210ENST00000532925 USP17L13C9JLJ4 530 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms