RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.6■□□□□ 0.09
TSPAN4-220ENST00000532375 RTN4RL1Q86UN2 441 aaPredicted RBP15.6■□□□□ 0.09
TSPAN4-220ENST00000532375 METTL13Q8N6R0 699 aa15.6■□□□□ 0.09
TSPAN4-220ENST00000532375 MMTAG2Q9BU76 263 aaKnown RBP15.6■□□□□ 0.09
TSPAN4-220ENST00000532375 PBX4Q9BYU1 374 aa15.6■□□□□ 0.09
TSPAN4-220ENST00000532375 TUFT1Q9NNX1 390 aa15.6■□□□□ 0.09
TSPAN4-220ENST00000532375 ANKEF1Q9NU02 776 aa15.6■□□□□ 0.09
TSPAN4-220ENST00000532375 TTC3P53804 2025 aa15.6■□□□□ 0.09
TSPAN4-220ENST00000532375 DEFB103AP81534 67 aa15.59■□□□□ 0.09
TSPAN4-220ENST00000532375 IKBKEQ14164 716 aa15.59■□□□□ 0.09
TSPAN4-220ENST00000532375 PTPAQ15257 358 aa15.59■□□□□ 0.09
TSPAN4-220ENST00000532375 TSHZ1Q6ZSZ6 1077 aa15.59■□□□□ 0.09
TSPAN4-220ENST00000532375 PHOSPHO2Q8TCD6 241 aa15.59■□□□□ 0.09
TSPAN4-220ENST00000532375 SEPT8Q92599 483 aa15.59■□□□□ 0.09
TSPAN4-220ENST00000532375 CEP170P1Q96L14 293 aa15.59■□□□□ 0.09
TSPAN4-220ENST00000532375 IFIH1Q9BYX4 1025 aaKnown RBP15.59■□□□□ 0.09
TSPAN4-220ENST00000532375 MTIF3Q9H2K0 278 aaKnown RBP15.59■□□□□ 0.09
TSPAN4-220ENST00000532375 TMX1Q9H3N1 280 aa15.59■□□□□ 0.09
TSPAN4-220ENST00000532375 SUGCTQ9HAC7 445 aa15.59■□□□□ 0.09
TSPAN4-220ENST00000532375 XPNPEP1Q9NQW7 623 aa15.59■□□□□ 0.09
TSPAN4-220ENST00000532375 PADI3Q9ULW8 664 aa15.59■□□□□ 0.09
TSPAN4-220ENST00000532375 YBX2Q9Y2T7 364 aaKnown RBP15.59■□□□□ 0.09
TSPAN4-220ENST00000532375 NOC2LQ9Y3T9 749 aaKnown RBP15.59■□□□□ 0.09
TSPAN4-220ENST00000532375 PPME1Q9Y570 386 aa15.59■□□□□ 0.09
TSPAN4-220ENST00000532375 PP2D1A8MPX8 630 aa15.58■□□□□ 0.08
TSPAN4-220ENST00000532375 ZBBXA8MT70 800 aa15.58■□□□□ 0.08
TSPAN4-220ENST00000532375 CDC25AP30304 524 aa15.58■□□□□ 0.08
TSPAN4-220ENST00000532375 CD52P31358 61 aa15.58■□□□□ 0.08
TSPAN4-220ENST00000532375 RARRES1P49788 294 aa15.58■□□□□ 0.08
TSPAN4-220ENST00000532375 GPC3P51654 580 aa15.58■□□□□ 0.08
TSPAN4-220ENST00000532375 CRYBB1P53674 252 aaPredicted RBP15.58■□□□□ 0.08
TSPAN4-220ENST00000532375 NLRP11P59045 1033 aaKnown RBP15.58■□□□□ 0.08
TSPAN4-220ENST00000532375 KIZQ2M2Z5 673 aa15.58■□□□□ 0.08
TSPAN4-220ENST00000532375 XKR9Q5GH70 373 aa15.58■□□□□ 0.08
TSPAN4-220ENST00000532375 ARL6IP4Q66PJ3 421 aaKnown RBP15.58■□□□□ 0.08
TSPAN4-220ENST00000532375 OTUD6AQ7L8S5 288 aa15.58■□□□□ 0.08
TSPAN4-220ENST00000532375 TMCO2Q7Z6W1 182 aaPredicted RBP15.58■□□□□ 0.08
TSPAN4-220ENST00000532375 CRIPAKQ8N1N5 446 aa15.58■□□□□ 0.08
TSPAN4-220ENST00000532375 USP38Q8NB14 1042 aa15.58■□□□□ 0.08
TSPAN4-220ENST00000532375 PIGOQ8TEQ8 1089 aa15.58■□□□□ 0.08
TSPAN4-220ENST00000532375 LINC01599Q8WXQ3 324 aa15.58■□□□□ 0.08
TSPAN4-220ENST00000532375 ERVK-5Q9HDB9 667 aa15.58■□□□□ 0.08
TSPAN4-220ENST00000532375 LRWD1Q9UFC0 647 aa15.58■□□□□ 0.08
TSPAN4-220ENST00000532375 CHD9Q3L8U1 2897 aa15.58■□□□□ 0.08
TSPAN4-220ENST00000532375 MYO9BQ13459 2157 aa15.58■□□□□ 0.08
TSPAN4-220ENST00000532375 ENPP3O14638 875 aa15.57■□□□□ 0.08
TSPAN4-220ENST00000532375 EFCAB14O75071 495 aa15.57■□□□□ 0.08
TSPAN4-220ENST00000532375 ATP2A2P16615 1042 aaKnown RBP15.57■□□□□ 0.08
TSPAN4-220ENST00000532375 MUTP22033 750 aa15.57■□□□□ 0.08
TSPAN4-220ENST00000532375 TMOD1P28289 359 aa15.57■□□□□ 0.08
TSPAN4-220ENST00000532375 RABGGTBP53611 331 aa15.57■□□□□ 0.08
TSPAN4-220ENST00000532375 GRIN1Q05586 938 aa15.57■□□□□ 0.08
TSPAN4-220ENST00000532375 PKP1Q13835 747 aa15.57■□□□□ 0.08
TSPAN4-220ENST00000532375 SF3A1Q15459 793 aaKnown RBP15.57■□□□□ 0.08
TSPAN4-220ENST00000532375 POTEGQ6S5H5 508 aa15.57■□□□□ 0.08
TSPAN4-220ENST00000532375 DTHD1Q6ZMT9 781 aa15.57■□□□□ 0.08
TSPAN4-220ENST00000532375 HERC6Q8IVU3 1022 aa15.57■□□□□ 0.08
TSPAN4-220ENST00000532375 APBB2Q92870 758 aa15.57■□□□□ 0.08
TSPAN4-220ENST00000532375 ZNF668Q96K58 619 aaPredicted RBP15.57■□□□□ 0.08
TSPAN4-220ENST00000532375 PPP1R16BQ96T49 567 aa15.57■□□□□ 0.08
TSPAN4-220ENST00000532375 SLC9A7Q96T83 725 aa15.57■□□□□ 0.08
TSPAN4-220ENST00000532375 OSMRQ99650 979 aa15.57■□□□□ 0.08
TSPAN4-220ENST00000532375 TTYH1Q9H313 450 aaPredicted RBP15.57■□□□□ 0.08
TSPAN4-220ENST00000532375 DBR1Q9UK59 544 aaKnown RBP15.57■□□□□ 0.08
TSPAN4-220ENST00000532375 CLIC4Q9Y696 253 aa15.57■□□□□ 0.08
TSPAN4-220ENST00000532375 MYH15Q9Y2K3 1946 aa15.56■□□□□ 0.08
TSPAN4-220ENST00000532375 MYOGP15173 224 aa15.56■□□□□ 0.08
TSPAN4-220ENST00000532375 DNAJB2P25686 324 aa15.56■□□□□ 0.08
TSPAN4-220ENST00000532375 RFC5P40937 340 aa15.56■□□□□ 0.08
TSPAN4-220ENST00000532375 TMEM266Q2M3C6 531 aa15.56■□□□□ 0.08
TSPAN4-220ENST00000532375 FAM228AQ86W67 206 aa15.56■□□□□ 0.08
TSPAN4-220ENST00000532375 KSR1Q8IVT5 923 aa15.56■□□□□ 0.08
TSPAN4-220ENST00000532375 ZNF710Q8N1W2 664 aa15.56■□□□□ 0.08
TSPAN4-220ENST00000532375 SPRYD3Q8NCJ5 442 aa15.56■□□□□ 0.08
TSPAN4-220ENST00000532375 ERMNQ8TAM6 284 aa15.56■□□□□ 0.08
TSPAN4-220ENST00000532375 NACC1Q96RE7 527 aa15.56■□□□□ 0.08
TSPAN4-220ENST00000532375 MAP7D2Q96T17 732 aa15.56■□□□□ 0.08
TSPAN4-220ENST00000532375 ZSCAN16Q9H4T2 348 aaPredicted RBP15.56■□□□□ 0.08
TSPAN4-220ENST00000532375 SUCLA2Q9P2R7 463 aaPredicted RBP15.56■□□□□ 0.08
TSPAN4-220ENST00000532375 AKT3Q9Y243 479 aa15.56■□□□□ 0.08
TSPAN4-220ENST00000532375 M0QZ92 97 aa15.55■□□□□ 0.08
TSPAN4-220ENST00000532375 MGEA5O60502 916 aa15.55■□□□□ 0.08
TSPAN4-220ENST00000532375 ARHGEF15O94989 841 aa15.55■□□□□ 0.08
TSPAN4-220ENST00000532375 GJB5O95377 273 aa15.55■□□□□ 0.08
TSPAN4-220ENST00000532375 DARSP14868 501 aaKnown RBP15.55■□□□□ 0.08
TSPAN4-220ENST00000532375 EIF4BP23588 611 aaKnown RBP15.55■□□□□ 0.08
TSPAN4-220ENST00000532375 ARL2P36404 184 aa15.55■□□□□ 0.08
TSPAN4-220ENST00000532375 CCT6AP40227 531 aaKnown RBP15.55■□□□□ 0.08
TSPAN4-220ENST00000532375 DSC3Q14574 896 aa15.55■□□□□ 0.08
TSPAN4-220ENST00000532375 EMC2Q15006 297 aa15.55■□□□□ 0.08
TSPAN4-220ENST00000532375 HYIQ5T013 277 aa15.55■□□□□ 0.08
TSPAN4-220ENST00000532375 Q7L0L9 218 aa15.55■□□□□ 0.08
TSPAN4-220ENST00000532375 PRPF31Q8WWY3 499 aaKnown RBP15.55■□□□□ 0.08
TSPAN4-220ENST00000532375 TOP1MTQ969P6 601 aa15.55■□□□□ 0.08
TSPAN4-220ENST00000532375 TMEM143Q96AN5 459 aa15.55■□□□□ 0.08
TSPAN4-220ENST00000532375 PNMA5Q96PV4 448 aa15.55■□□□□ 0.08
TSPAN4-220ENST00000532375 USP28Q96RU2 1077 aa15.55■□□□□ 0.08
TSPAN4-220ENST00000532375 JPH2Q9BR39 696 aaPredicted RBP15.55■□□□□ 0.08
TSPAN4-220ENST00000532375 SEMA6BQ9H3T3 888 aa15.55■□□□□ 0.08
TSPAN4-220ENST00000532375 IFT122Q9HBG6 1241 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms