RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 RFC2P35250 354 aa13.17□□□□□ -0.3
PPFIA1-220ENST00000532024 STAT6P42226 847 aa13.17□□□□□ -0.3
PPFIA1-220ENST00000532024 GRB10Q13322 594 aa13.17□□□□□ -0.3
PPFIA1-220ENST00000532024 HIC1Q14526 733 aa13.17□□□□□ -0.3
PPFIA1-220ENST00000532024 EMC2Q15006 297 aa13.17□□□□□ -0.3
PPFIA1-220ENST00000532024 KARSQ15046 597 aaKnown RBP13.17□□□□□ -0.3
PPFIA1-220ENST00000532024 TMEM119Q4V9L6 283 aa13.17□□□□□ -0.3
PPFIA1-220ENST00000532024 SPECC1Q5M775 1068 aa13.17□□□□□ -0.3
PPFIA1-220ENST00000532024 ADALQ6DHV7 355 aa13.17□□□□□ -0.3
PPFIA1-220ENST00000532024 LRRC8DQ7L1W4 858 aa13.17□□□□□ -0.3
PPFIA1-220ENST00000532024 DNAJB3Q8WWF6 145 aa13.17□□□□□ -0.3
PPFIA1-220ENST00000532024 EPSTI1Q96J88 318 aa13.17□□□□□ -0.3
PPFIA1-220ENST00000532024 SCLT1Q96NL6 688 aa13.17□□□□□ -0.3
PPFIA1-220ENST00000532024 MTRQ99707 1265 aa13.17□□□□□ -0.3
PPFIA1-220ENST00000532024 DHX33Q9H6R0 707 aaKnown RBP13.17□□□□□ -0.3
PPFIA1-220ENST00000532024 KCND2Q9NZV8 630 aa13.17□□□□□ -0.3
PPFIA1-220ENST00000532024 ZMYND8Q9ULU4 1186 aaPredicted RBP13.17□□□□□ -0.3
PPFIA1-220ENST00000532024 DNAH12Q6ZR08 3092 aa13.17□□□□□ -0.3
PPFIA1-220ENST00000532024 RSPH10B2B2RC85 870 aa13.16□□□□□ -0.3
PPFIA1-220ENST00000532024 E9PMD0 336 aa13.16□□□□□ -0.3
PPFIA1-220ENST00000532024 RSPH10BP0C881 870 aa13.16□□□□□ -0.3
PPFIA1-220ENST00000532024 CKBP12277 381 aa13.16□□□□□ -0.3
PPFIA1-220ENST00000532024 CLCN3P51790 818 aa13.16□□□□□ -0.3
PPFIA1-220ENST00000532024 MRPS6P82932 125 aaKnown RBP13.16□□□□□ -0.3
PPFIA1-220ENST00000532024 AXDND1Q5T1B0 1012 aaPredicted RBP13.16□□□□□ -0.3
PPFIA1-220ENST00000532024 RESP18Q5W5W9 173 aa13.16□□□□□ -0.3
PPFIA1-220ENST00000532024 MFSD5Q6N075 450 aa13.16□□□□□ -0.3
PPFIA1-220ENST00000532024 PADI6Q6TGC4 694 aa13.16□□□□□ -0.3
PPFIA1-220ENST00000532024 RUFY4Q6ZNE9 571 aa13.16□□□□□ -0.3
PPFIA1-220ENST00000532024 SH3RF1Q7Z6J0 888 aa13.16□□□□□ -0.3
PPFIA1-220ENST00000532024 LRRC71Q8N4P6 559 aa13.16□□□□□ -0.3
PPFIA1-220ENST00000532024 PSPC1Q8WXF1 523 aaKnown RBP13.16□□□□□ -0.3
PPFIA1-220ENST00000532024 LARP4BQ92615 738 aaKnown RBP13.16□□□□□ -0.3
PPFIA1-220ENST00000532024 GBP4Q96PP9 640 aa13.16□□□□□ -0.3
PPFIA1-220ENST00000532024 PNMA5Q96PV4 448 aa13.16□□□□□ -0.3
PPFIA1-220ENST00000532024 CTAGE1Q96RT6 745 aa13.16□□□□□ -0.3
PPFIA1-220ENST00000532024 PLIN2Q99541 437 aa13.16□□□□□ -0.3
PPFIA1-220ENST00000532024 SH2D3AQ9BRG2 576 aa13.16□□□□□ -0.3
PPFIA1-220ENST00000532024 TIPINQ9BVW5 301 aa13.16□□□□□ -0.3
PPFIA1-220ENST00000532024 CUEDC2Q9H467 287 aa13.16□□□□□ -0.3
PPFIA1-220ENST00000532024 TANC1Q9C0D5 1861 aa13.16□□□□□ -0.3
PPFIA1-220ENST00000532024 IGKV6-21A0A0C4DH24 114 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 A0A1W2PQ27 194 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 A0A1W2PQ64 194 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 A0A1W2PQD8 194 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 TRIM43BA6NCK2 446 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 ZBTB39O15060 712 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 ASAP2O43150 1006 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 KRT18P05783 430 aaKnown RBP13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 PFKMP08237 780 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 CTSHP09668 335 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 PLA2G4BP0C869 781 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 SYN1P17600 705 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 CMA1P23946 247 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 CYP2C18P33260 490 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 FPGSQ05932 587 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 PPIGQ13427 754 aaKnown RBP eCLIP13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 TFDP1Q14186 410 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 MXD4Q14582 209 aaPredicted RBP13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 ECM1Q16610 540 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 TRIM71Q2Q1W2 868 aaKnown RBP13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 ODR4Q5SWX8 454 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 SHC4Q6S5L8 630 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 RPUSD2Q8IZ73 545 aaKnown RBP13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 KIAA0319LQ8IZA0 1049 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 IQUBQ8NA54 791 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 MRPS27Q92552 414 aaKnown RBP13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 DHX38Q92620 1227 aaKnown RBP13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 RAD54LQ92698 747 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 KIFAP3Q92845 792 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 TRIM43Q96BQ3 446 aaPredicted RBP13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 CCDC34Q96HJ3 373 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 DRC1Q96MC2 740 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 LRRC27Q9C0I9 530 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 MAGEF1Q9HAY2 307 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 GDPD2Q9HCC8 539 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 BMP2KQ9NSY1 1161 aaPredicted RBP13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 SUCLA2Q9P2R7 463 aaPredicted RBP13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 TRPV2Q9Y5S1 764 aa13.15□□□□□ -0.3
PPFIA1-220ENST00000532024 GOLGA6L22H0YM25 854 aa13.14□□□□□ -0.31
PPFIA1-220ENST00000532024 CYP11B2P19099 503 aa13.14□□□□□ -0.31
PPFIA1-220ENST00000532024 CCL23P55773 120 aa13.14□□□□□ -0.31
PPFIA1-220ENST00000532024 PPP2R5AQ15172 486 aa13.14□□□□□ -0.31
PPFIA1-220ENST00000532024 ZNF618Q5T7W0 954 aa13.14□□□□□ -0.31
PPFIA1-220ENST00000532024 FAM102BQ5T8I3 360 aa13.14□□□□□ -0.31
PPFIA1-220ENST00000532024 USP49Q70CQ1 688 aa13.14□□□□□ -0.31
PPFIA1-220ENST00000532024 SV2BQ7L1I2 683 aa13.14□□□□□ -0.31
PPFIA1-220ENST00000532024 LINC01465Q8N7H1 131 aa13.14□□□□□ -0.31
PPFIA1-220ENST00000532024 PDILTQ8N807 584 aa13.14□□□□□ -0.31
PPFIA1-220ENST00000532024 SYT2Q8N9I0 419 aaPredicted RBP13.14□□□□□ -0.31
PPFIA1-220ENST00000532024 USP38Q8NB14 1042 aa13.14□□□□□ -0.31
PPFIA1-220ENST00000532024 NLRP7Q8WX94 980 aa13.14□□□□□ -0.31
PPFIA1-220ENST00000532024 ZBTB10Q96DT7 871 aa13.14□□□□□ -0.31
PPFIA1-220ENST00000532024 CHAMP1Q96JM3 812 aa13.14□□□□□ -0.31
PPFIA1-220ENST00000532024 CEP89Q96ST8 783 aa13.14□□□□□ -0.31
PPFIA1-220ENST00000532024 USP25Q9UHP3 1055 aa13.14□□□□□ -0.31
PPFIA1-220ENST00000532024 KCNH3Q9ULD8 1083 aa13.14□□□□□ -0.31
PPFIA1-220ENST00000532024 COL4A3BPQ9Y5P4 624 aa13.14□□□□□ -0.31
PPFIA1-220ENST00000532024 TRIP12Q14669 1992 aaPredicted RBP13.14□□□□□ -0.31
PPFIA1-220ENST00000532024 A0A087WWV3 80 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms