RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 NUCB1Q02818 461 aa10.25□□□□□ -0.77
USF1-210ENST00000531842 UBE3AQ05086 875 aa10.25□□□□□ -0.77
USF1-210ENST00000531842 TRDNQ13061 729 aa10.25□□□□□ -0.77
USF1-210ENST00000531842 MTMR3Q13615 1198 aa10.25□□□□□ -0.77
USF1-210ENST00000531842 DSC3Q14574 896 aa10.25□□□□□ -0.77
USF1-210ENST00000531842 CLLU1OSQ5K130 101 aa10.25□□□□□ -0.77
USF1-210ENST00000531842 ASTLQ6HA08 431 aaPredicted RBP10.25□□□□□ -0.77
USF1-210ENST00000531842 TYW1BQ6NUM6 668 aa10.25□□□□□ -0.77
USF1-210ENST00000531842 SLC24A5Q71RS6 500 aa10.25□□□□□ -0.77
USF1-210ENST00000531842 CCDC60Q8IWA6 550 aaPredicted RBP10.25□□□□□ -0.77
USF1-210ENST00000531842 SMC5Q8IY18 1101 aa10.25□□□□□ -0.77
USF1-210ENST00000531842 MB21D2Q8IYB1 491 aaPredicted RBP10.25□□□□□ -0.77
USF1-210ENST00000531842 BCL7CQ8WUZ0 217 aaPredicted RBP10.25□□□□□ -0.77
USF1-210ENST00000531842 CDCA3Q99618 268 aaPredicted RBP10.25□□□□□ -0.77
USF1-210ENST00000531842 MXRA8Q9BRK3 442 aa10.25□□□□□ -0.77
USF1-210ENST00000531842 SPZ1Q9BXG8 430 aa10.25□□□□□ -0.77
USF1-210ENST00000531842 LRRC2Q9BYS8 371 aa10.25□□□□□ -0.77
USF1-210ENST00000531842 OSBPL3Q9H4L5 887 aa10.25□□□□□ -0.77
USF1-210ENST00000531842 AZI2Q9H6S1 392 aa10.25□□□□□ -0.77
USF1-210ENST00000531842 ATP6V0A4Q9HBG4 840 aa10.25□□□□□ -0.77
USF1-210ENST00000531842 OTOGLQ3ZCN5 2332 aa10.25□□□□□ -0.77
USF1-210ENST00000531842 KDM3AQ9Y4C1 1321 aa10.25□□□□□ -0.77
USF1-210ENST00000531842 FANCMQ8IYD8 2048 aa10.24□□□□□ -0.77
USF1-210ENST00000531842 GPR179Q6PRD1 2367 aa10.24□□□□□ -0.77
USF1-210ENST00000531842 NARSO43776 548 aaKnown RBP10.24□□□□□ -0.77
USF1-210ENST00000531842 GPR32O75388 356 aa10.24□□□□□ -0.77
USF1-210ENST00000531842 LAG3P18627 525 aa10.24□□□□□ -0.77
USF1-210ENST00000531842 CLCN3P51790 818 aa10.24□□□□□ -0.77
USF1-210ENST00000531842 TRAF1Q13077 416 aa10.24□□□□□ -0.77
USF1-210ENST00000531842 XRRA1Q6P2D8 792 aa10.24□□□□□ -0.77
USF1-210ENST00000531842 TMC5Q6UXY8 1006 aa10.24□□□□□ -0.77
USF1-210ENST00000531842 HEATR3Q7Z4Q2 680 aa10.24□□□□□ -0.77
USF1-210ENST00000531842 RALYLQ86SE5 291 aaKnown RBP10.24□□□□□ -0.77
USF1-210ENST00000531842 HELQQ8TDG4 1101 aa10.24□□□□□ -0.77
USF1-210ENST00000531842 NKD2Q969F2 451 aaPredicted RBP10.24□□□□□ -0.77
USF1-210ENST00000531842 RMDN1Q96DB5 314 aa10.24□□□□□ -0.77
USF1-210ENST00000531842 ADAM7Q9H2U9 754 aa10.24□□□□□ -0.77
USF1-210ENST00000531842 MFSD1Q9H3U5 465 aa10.24□□□□□ -0.77
USF1-210ENST00000531842 AGO4Q9HCK5 861 aaKnown RBP10.24□□□□□ -0.77
USF1-210ENST00000531842 TMEM161AQ9NX61 479 aa10.24□□□□□ -0.77
USF1-210ENST00000531842 SEC63Q9UGP8 760 aaKnown RBP10.24□□□□□ -0.77
USF1-210ENST00000531842 R4GN57 208 aa10.24□□□□□ -0.77
USF1-210ENST00000531842 KMT2BQ9UMN6 2715 aaPredicted RBP10.24□□□□□ -0.77
USF1-210ENST00000531842 BACH1O14867 736 aa10.23□□□□□ -0.77
USF1-210ENST00000531842 B4GALT3O60512 393 aa10.23□□□□□ -0.77
USF1-210ENST00000531842 KRT37O76014 449 aa10.23□□□□□ -0.77
USF1-210ENST00000531842 C22orf31O95567 290 aa10.23□□□□□ -0.77
USF1-210ENST00000531842 FAM189BP81408 668 aa10.23□□□□□ -0.77
USF1-210ENST00000531842 PLCB3Q01970 1234 aa10.23□□□□□ -0.77
USF1-210ENST00000531842 AAMPQ13685 434 aa10.23□□□□□ -0.77
USF1-210ENST00000531842 WWC2Q6AWC2 1192 aa10.23□□□□□ -0.77
USF1-210ENST00000531842 SWSAP1Q6NVH7 229 aa10.23□□□□□ -0.77
USF1-210ENST00000531842 PLPPR4Q7Z2D5 763 aa10.23□□□□□ -0.77
USF1-210ENST00000531842 LRRC71Q8N4P6 559 aa10.23□□□□□ -0.77
USF1-210ENST00000531842 METTL13Q8N6R0 699 aa10.23□□□□□ -0.77
USF1-210ENST00000531842 MRPL43Q8N983 215 aaKnown RBP10.23□□□□□ -0.77
USF1-210ENST00000531842 NCOA7Q8NI08 942 aa10.23□□□□□ -0.77
USF1-210ENST00000531842 CTCFLQ8NI51 663 aaPredicted RBP10.23□□□□□ -0.77
USF1-210ENST00000531842 RASGRP4Q8TDF6 673 aa10.23□□□□□ -0.77
USF1-210ENST00000531842 RSAD2Q8WXG1 361 aa10.23□□□□□ -0.77
USF1-210ENST00000531842 RIN2Q8WYP3 895 aaPredicted RBP10.23□□□□□ -0.77
USF1-210ENST00000531842 CDHR1Q96JP9 859 aa10.23□□□□□ -0.77
USF1-210ENST00000531842 ZNF558Q96NG5 402 aa10.23□□□□□ -0.77
USF1-210ENST00000531842 SDF4Q9BRK5 362 aa10.23□□□□□ -0.77
USF1-210ENST00000531842 TMEM117Q9H0C3 514 aa10.23□□□□□ -0.77
USF1-210ENST00000531842 NR2E1Q9Y466 385 aa10.23□□□□□ -0.77
USF1-210ENST00000531842 IGKV6D-21A0A0A0MT36 114 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 SPDYE3A6NKU9 549 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 MEIS3P2A8K0S8 358 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 HIP1O00291 1037 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 PRC1O43663 620 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 ATG7O95352 703 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 CXCL14O95715 111 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 NT5C2P49902 561 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 FOXK2Q01167 660 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 ANGPT1Q15389 498 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 CES5AQ6NT32 575 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 PDXDC2PQ6P474 469 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 ABHD15Q6UXT9 468 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 ECHDC2Q86YB7 292 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 UBALD2Q8IYN6 164 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 KIAA2013Q8IYS2 634 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 SLC39A11Q8N1S5 342 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 NME8Q8N427 588 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 DCLK2Q8N568 766 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 TDRD5Q8NAT2 981 aaKnown RBP10.22□□□□□ -0.77
USF1-210ENST00000531842 CASP10Q92851 521 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 LPPQ93052 612 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 VN1R3Q9BXE9 311 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 IRF2BPLQ9H1B7 796 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 C1orf112Q9NSG2 853 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 SPG21Q9NZD8 308 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 PUF60Q9UHX1 559 aaKnown RBP10.22□□□□□ -0.77
USF1-210ENST00000531842 DBR1Q9UK59 544 aaKnown RBP10.22□□□□□ -0.77
USF1-210ENST00000531842 LZTS1Q9Y250 596 aa10.22□□□□□ -0.77
USF1-210ENST00000531842 MAP1BP46821 2468 aaKnown RBP10.22□□□□□ -0.77
USF1-210ENST00000531842 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.21□□□□□ -0.77
USF1-210ENST00000531842 FAM86B1E9PN63 330 aa10.21□□□□□ -0.77
USF1-210ENST00000531842 SH2B2O14492 632 aaPredicted RBP10.21□□□□□ -0.77
USF1-210ENST00000531842 GPR182O15218 404 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms