RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 MCM8Q9UJA3 840 aa5.96□□□□□ -1.46
USP47-211ENST00000531513 NR2E1Q9Y466 385 aa5.96□□□□□ -1.46
USP47-211ENST00000531513 WNT9AO14904 365 aa5.95□□□□□ -1.46
USP47-211ENST00000531513 C1SP09871 688 aa5.95□□□□□ -1.46
USP47-211ENST00000531513 C6orf222P0C671 652 aaPredicted RBP5.95□□□□□ -1.46
USP47-211ENST00000531513 BTBD8Q5XKL5 378 aa5.95□□□□□ -1.46
USP47-211ENST00000531513 MAMDC4Q6UXC1 1216 aa5.95□□□□□ -1.46
USP47-211ENST00000531513 DPP8Q6V1X1 898 aaPredicted RBP5.95□□□□□ -1.46
USP47-211ENST00000531513 ALG1Q9BT22 464 aa5.95□□□□□ -1.46
USP47-211ENST00000531513 KIAA1683Q9H0B3 1180 aa5.95□□□□□ -1.46
USP47-211ENST00000531513 INTS7Q9NVH2 962 aaKnown RBP5.95□□□□□ -1.46
USP47-211ENST00000531513 C11orf21Q9P2W6 132 aa5.95□□□□□ -1.46
USP47-211ENST00000531513 MAGEC2Q9UBF1 373 aaPredicted RBP5.95□□□□□ -1.46
USP47-211ENST00000531513 SRPK3Q9UPE1 567 aa5.95□□□□□ -1.46
USP47-211ENST00000531513 THRAP3Q9Y2W1 955 aaKnown RBP5.95□□□□□ -1.46
USP47-211ENST00000531513 TRAF6Q9Y4K3 522 aa5.95□□□□□ -1.46
USP47-211ENST00000531513 FAM90A27PA6NNH2 459 aa5.94□□□□□ -1.46
USP47-211ENST00000531513 PTPN1P18031 435 aaKnown RBP5.94□□□□□ -1.46
USP47-211ENST00000531513 SDSP20132 328 aa5.94□□□□□ -1.46
USP47-211ENST00000531513 SUMO1P63165 101 aaKnown RBP5.94□□□□□ -1.46
USP47-211ENST00000531513 TBR1Q16650 682 aa5.94□□□□□ -1.46
USP47-211ENST00000531513 WDR72Q3MJ13 1102 aa5.94□□□□□ -1.46
USP47-211ENST00000531513 MAMDC2Q7Z304 686 aaPredicted RBP5.94□□□□□ -1.46
USP47-211ENST00000531513 LRRTM3Q86VH5 581 aa5.94□□□□□ -1.46
USP47-211ENST00000531513 C1orf210Q8IVY1 113 aa5.94□□□□□ -1.46
USP47-211ENST00000531513 ZNF808Q8N4W9 903 aaPredicted RBP5.94□□□□□ -1.46
USP47-211ENST00000531513 AMER2Q8N7J2 671 aa5.94□□□□□ -1.46
USP47-211ENST00000531513 IL17DQ8TAD2 202 aa5.94□□□□□ -1.46
USP47-211ENST00000531513 FAM89AQ96GI7 184 aa5.94□□□□□ -1.46
USP47-211ENST00000531513 SCYL1Q96KG9 808 aa5.94□□□□□ -1.46
USP47-211ENST00000531513 TARS2Q9BW92 718 aaKnown RBP5.94□□□□□ -1.46
USP47-211ENST00000531513 TRIM8Q9BZR9 551 aa5.94□□□□□ -1.46
USP47-211ENST00000531513 ZDHHC5Q9C0B5 715 aa5.94□□□□□ -1.46
USP47-211ENST00000531513 C12orf65Q9H3J6 166 aaKnown RBP5.94□□□□□ -1.46
USP47-211ENST00000531513 RIC8BQ9NVN3 520 aa5.94□□□□□ -1.46
USP47-211ENST00000531513 ARHGAP28Q9P2N2 729 aa5.94□□□□□ -1.46
USP47-211ENST00000531513 EID1Q9Y6B2 187 aa5.94□□□□□ -1.46
USP47-211ENST00000531513 WDR33Q9C0J8 1336 aaKnown RBP5.94□□□□□ -1.46
USP47-211ENST00000531513 WASHC2CQ9Y4E1 1318 aa5.94□□□□□ -1.46
USP47-211ENST00000531513 ARHGAP6O43182 974 aa5.93□□□□□ -1.46
USP47-211ENST00000531513 HMGCRP04035 888 aa5.93□□□□□ -1.46
USP47-211ENST00000531513 ACRV1P26436 265 aa5.93□□□□□ -1.46
USP47-211ENST00000531513 MCM7P33993 719 aa5.93□□□□□ -1.46
USP47-211ENST00000531513 ADCY8P40145 1251 aa5.93□□□□□ -1.46
USP47-211ENST00000531513 IL13RA1P78552 427 aa5.93□□□□□ -1.46
USP47-211ENST00000531513 NFYCQ13952 458 aa5.93□□□□□ -1.46
USP47-211ENST00000531513 SMN1Q16637 294 aaKnown RBP5.93□□□□□ -1.46
USP47-211ENST00000531513 CNNM4Q6P4Q7 775 aa5.93□□□□□ -1.46
USP47-211ENST00000531513 DDX46Q7L014 1031 aaKnown RBP5.93□□□□□ -1.46
USP47-211ENST00000531513 AFAP1L2Q8N4X5 818 aa5.93□□□□□ -1.46
USP47-211ENST00000531513 ATL2Q8NHH9 583 aa5.93□□□□□ -1.46
USP47-211ENST00000531513 CACTINQ8WUQ7 758 aaKnown RBP5.93□□□□□ -1.46
USP47-211ENST00000531513 CFHR4Q92496 578 aa5.93□□□□□ -1.46
USP47-211ENST00000531513 PTPRN2Q92932 1015 aa5.93□□□□□ -1.46
USP47-211ENST00000531513 IKZF4Q9H2S9 585 aa5.93□□□□□ -1.46
USP47-211ENST00000531513 GEMIN8Q9NWZ8 242 aaKnown RBP5.93□□□□□ -1.46
USP47-211ENST00000531513 TCEAL9Q9UHQ7 104 aa5.93□□□□□ -1.46
USP47-211ENST00000531513 AQP7O14520 342 aa5.92□□□□□ -1.46
USP47-211ENST00000531513 MAP4K4O95819 1239 aaPredicted RBP5.92□□□□□ -1.46
USP47-211ENST00000531513 KCNQ1P51787 676 aa5.92□□□□□ -1.46
USP47-211ENST00000531513 INHBEP58166 350 aa5.92□□□□□ -1.46
USP47-211ENST00000531513 PAK1Q13153 545 aa5.92□□□□□ -1.46
USP47-211ENST00000531513 FAM50AQ14320 339 aaKnown RBP5.92□□□□□ -1.46
USP47-211ENST00000531513 LARP4Q71RC2 724 aaKnown RBP eCLIP5.92□□□□□ -1.464e-6■■□□□ 12.8
USP47-211ENST00000531513 CERS3Q8IU89 383 aa5.92□□□□□ -1.46
USP47-211ENST00000531513 NLGN4XQ8N0W4 816 aa5.92□□□□□ -1.46
USP47-211ENST00000531513 CCDC194A0A1B0GVG4 234 aa5.91□□□□□ -1.46
USP47-211ENST00000531513 ARVCFO00192 962 aa5.91□□□□□ -1.46
USP47-211ENST00000531513 MAN2B1O00754 1011 aa5.91□□□□□ -1.46
USP47-211ENST00000531513 DNAJC8O75937 253 aaPredicted RBP5.91□□□□□ -1.46
USP47-211ENST00000531513 EYA4O95677 639 aa5.91□□□□□ -1.46
USP47-211ENST00000531513 CPEP16870 476 aa5.91□□□□□ -1.46
USP47-211ENST00000531513 PTGS1P23219 599 aa5.91□□□□□ -1.46
USP47-211ENST00000531513 MC4RP32245 332 aa5.91□□□□□ -1.46
USP47-211ENST00000531513 DPTQ07507 201 aa5.91□□□□□ -1.46
USP47-211ENST00000531513 GPR19Q15760 415 aa5.91□□□□□ -1.46
USP47-211ENST00000531513 TRIM61Q5EBN2 209 aa5.91□□□□□ -1.46
USP47-211ENST00000531513 FIGNQ5HY92 759 aa5.91□□□□□ -1.46
USP47-211ENST00000531513 ARHGAP36Q6ZRI8 547 aa5.91□□□□□ -1.46
USP47-211ENST00000531513 STRA8Q7Z7C7 330 aa5.91□□□□□ -1.46
USP47-211ENST00000531513 PTRH1Q86Y79 214 aaKnown RBP5.91□□□□□ -1.46
USP47-211ENST00000531513 RAVER1Q8IY67 606 aaKnown RBP5.91□□□□□ -1.46
USP47-211ENST00000531513 AHI1Q8N157 1196 aa5.91□□□□□ -1.46
USP47-211ENST00000531513 PCDH19Q8TAB3 1148 aa5.91□□□□□ -1.46
USP47-211ENST00000531513 PLEKHG4BQ96PX9 1271 aa5.91□□□□□ -1.46
USP47-211ENST00000531513 ATP23Q9Y6H3 246 aa5.91□□□□□ -1.46
USP47-211ENST00000531513 FAM83GA6ND36 823 aa5.9□□□□□ -1.46
USP47-211ENST00000531513 ALDH1L1O75891 902 aa5.9□□□□□ -1.46
USP47-211ENST00000531513 NPTXRO95502 500 aa5.9□□□□□ -1.46
USP47-211ENST00000531513 AMY2AP04746 511 aa5.9□□□□□ -1.46
USP47-211ENST00000531513 AMY2BP19961 511 aa5.9□□□□□ -1.46
USP47-211ENST00000531513 AOAHP28039 575 aa5.9□□□□□ -1.46
USP47-211ENST00000531513 MSX2P35548 267 aaPredicted RBP5.9□□□□□ -1.46
USP47-211ENST00000531513 RPS19P39019 145 aaKnown RBP5.9□□□□□ -1.46
USP47-211ENST00000531513 GUCY2FP51841 1108 aa5.9□□□□□ -1.46
USP47-211ENST00000531513 GABREP78334 506 aa5.9□□□□□ -1.46
USP47-211ENST00000531513 PURAQ00577 322 aaKnown RBP5.9□□□□□ -1.46
USP47-211ENST00000531513 FOXL1Q12952 345 aa5.9□□□□□ -1.46
USP47-211ENST00000531513 PPM1KQ8N3J5 372 aa5.9□□□□□ -1.46
USP47-211ENST00000531513 SLC7A14Q8TBB6 771 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms