RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 SLC1A4P43007 532 aa8.17□□□□□ -1.1
TRIM53CP-201ENST00000531490 FSCN1Q16658 493 aaKnown RBP8.17□□□□□ -1.1
TRIM53CP-201ENST00000531490 AAK1Q2M2I8 961 aa8.17□□□□□ -1.1
TRIM53CP-201ENST00000531490 TMEM67Q5HYA8 995 aa8.17□□□□□ -1.1
TRIM53CP-201ENST00000531490 PSAPL1Q6NUJ1 521 aa8.17□□□□□ -1.1
TRIM53CP-201ENST00000531490 CHST3Q7LGC8 479 aa8.17□□□□□ -1.1
TRIM53CP-201ENST00000531490 HELQQ8TDG4 1101 aa8.17□□□□□ -1.1
TRIM53CP-201ENST00000531490 NUDT8Q8WV74 236 aa8.17□□□□□ -1.1
TRIM53CP-201ENST00000531490 PIK3R5Q8WYR1 880 aa8.17□□□□□ -1.1
TRIM53CP-201ENST00000531490 ESR2Q92731 530 aa8.17□□□□□ -1.1
TRIM53CP-201ENST00000531490 TTC14Q96N46 770 aa8.17□□□□□ -1.1
TRIM53CP-201ENST00000531490 CPVLQ9H3G5 476 aa8.17□□□□□ -1.1
TRIM53CP-201ENST00000531490 RNF41Q9H4P4 317 aaPredicted RBP8.17□□□□□ -1.1
TRIM53CP-201ENST00000531490 SLC38A10Q9HBR0 1119 aa8.17□□□□□ -1.1
TRIM53CP-201ENST00000531490 PDGFCQ9NRA1 345 aa8.17□□□□□ -1.1
TRIM53CP-201ENST00000531490 FEM1BQ9UK73 627 aa8.17□□□□□ -1.1
TRIM53CP-201ENST00000531490 ISY1Q9ULR0 285 aaKnown RBP8.17□□□□□ -1.1
TRIM53CP-201ENST00000531490 PCDHA11Q9Y5I1 949 aa8.17□□□□□ -1.1
TRIM53CP-201ENST00000531490 RBM8AQ9Y5S9 174 aaKnown RBP8.17□□□□□ -1.1
TRIM53CP-201ENST00000531490 MCM3APO60318 1980 aa8.17□□□□□ -1.1
TRIM53CP-201ENST00000531490 FRMPD2Q68DX3 1309 aaPredicted RBP8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 RAD50Q92878 1312 aa8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 E7EWF7 191 aa8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 LILRB5O75023 590 aa8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 IGHA1P01876 353 aa8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 GOLGA8HP0CJ92 632 aa8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 PCP11498 1178 aaKnown RBP8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 CPB1P15086 417 aa8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 COPB2P35606 906 aa8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 GPLD1P80108 840 aa8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 TNFAIP2Q03169 654 aa8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 TAP1Q03518 808 aa8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 GRB10Q13322 594 aa8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 PCSK7Q16549 785 aa8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 EEPD1Q7L9B9 569 aa8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 TMCO2Q7Z6W1 182 aaPredicted RBP8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 FAM35AQ86V20 835 aa8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 DGKHQ86XP1 1220 aa8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 ENAHQ8N8S7 591 aaPredicted RBP8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 GPR152Q8TDT2 470 aa8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 UBA5Q9GZZ9 404 aa8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 JPH1Q9HDC5 661 aaPredicted RBP8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 FAM13BQ9NYF5 915 aa8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 SYNPO2Q9UMS6 1093 aa8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 GNEQ9Y223 722 aaKnown RBP8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 PLXNA1Q9UIW2 1896 aa8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 BRWD1Q9NSI6 2320 aa8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 ZNF536O15090 1300 aa8.16□□□□□ -1.1
TRIM53CP-201ENST00000531490 WDFY4Q6ZS81 3184 aa8.15□□□□□ -1.1
TRIM53CP-201ENST00000531490 LCHNA4D1U4 455 aa8.15□□□□□ -1.1
TRIM53CP-201ENST00000531490 LPXNO60711 386 aa8.15□□□□□ -1.1
TRIM53CP-201ENST00000531490 MMP20O60882 483 aa8.15□□□□□ -1.1
TRIM53CP-201ENST00000531490 ZBED4O75132 1171 aa8.15□□□□□ -1.1
TRIM53CP-201ENST00000531490 PDHBP11177 359 aa8.15□□□□□ -1.1
TRIM53CP-201ENST00000531490 STAT2P52630 851 aa8.15□□□□□ -1.1
TRIM53CP-201ENST00000531490 NKX3-2P78367 333 aa8.15□□□□□ -1.1
TRIM53CP-201ENST00000531490 IKQ13123 557 aaPredicted RBP8.15□□□□□ -1.1
TRIM53CP-201ENST00000531490 NECTIN1Q15223 517 aa8.15□□□□□ -1.1
TRIM53CP-201ENST00000531490 SEC23AQ15436 765 aa8.15□□□□□ -1.1
TRIM53CP-201ENST00000531490 TLK2Q86UE8 772 aa8.15□□□□□ -1.1
TRIM53CP-201ENST00000531490 FBXO16Q8IX29 292 aaPredicted RBP8.15□□□□□ -1.1
TRIM53CP-201ENST00000531490 RPUSD2Q8IZ73 545 aaKnown RBP8.15□□□□□ -1.1
TRIM53CP-201ENST00000531490 CHURC1Q8WUH1 139 aa8.15□□□□□ -1.1
TRIM53CP-201ENST00000531490 ANKS1AQ92625 1134 aa8.15□□□□□ -1.1
TRIM53CP-201ENST00000531490 UIMC1Q96RL1 719 aa8.15□□□□□ -1.1
TRIM53CP-201ENST00000531490 KRT23Q9C075 422 aa8.15□□□□□ -1.1
TRIM53CP-201ENST00000531490 ALDH8A1Q9H2A2 487 aaPredicted RBP8.15□□□□□ -1.1
TRIM53CP-201ENST00000531490 ANO2Q9NQ90 1003 aa8.15□□□□□ -1.1
TRIM53CP-201ENST00000531490 MYH6P13533 1939 aa8.15□□□□□ -1.1
TRIM53CP-201ENST00000531490 TNKSO95271 1327 aa8.15□□□□□ -1.11
TRIM53CP-201ENST00000531490 PI4K2BG5E9Z4 385 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 SLC27A2O14975 620 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 ATP2A1O14983 1001 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 PLA2G6O60733 806 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 SNHG28P0DPA3 235 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 POU3F3P20264 500 aaPredicted RBP8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 AFF1P51825 1210 aaKnown RBP8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 NRLP54845 237 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 ANTXR2P58335 489 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 ZNF543Q08ER8 600 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 CCDC96Q2M329 555 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 PERM1Q5SV97 790 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 CREB3L3Q68CJ9 461 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 BTNL9Q6UXG8 535 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 KIAA1211Q6ZU35 1233 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 HFE2Q6ZVN8 426 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 ATCAYQ86WG3 371 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 IQCA1Q86XH1 822 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 FAM133AQ8N9E0 248 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 IGDCC4Q8TDY8 1250 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 DCAF4Q8WV16 495 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 SPOCK3Q9BQ16 436 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 AP5M1Q9H0R1 490 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 CNNM2Q9H8M5 875 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 A1CFQ9NQ94 594 aaKnown RBP8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 MTUS1Q9ULD2 1270 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 COG5Q9UP83 839 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 USTQ9Y2C2 406 aa8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 CTDP1Q9Y5B0 961 aaPredicted RBP8.14□□□□□ -1.11
TRIM53CP-201ENST00000531490 SPDYE3A6NKU9 549 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms