RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 GPR32O75388 356 aa25.13■■□□□ 1.61
TRAPPC4-210ENST00000531290 COL9A1P20849 921 aa25.13■■□□□ 1.61
TRAPPC4-210ENST00000531290 CYP3A7P24462 503 aa25.13■■□□□ 1.61
TRAPPC4-210ENST00000531290 PRKCEQ02156 737 aa25.13■■□□□ 1.61
TRAPPC4-210ENST00000531290 DAGLBQ8NCG7 672 aa25.13■■□□□ 1.61
TRAPPC4-210ENST00000531290 FAM50BQ9Y247 325 aa25.13■■□□□ 1.61
TRAPPC4-210ENST00000531290 SIP14410 1827 aa25.13■■□□□ 1.61
TRAPPC4-210ENST00000531290 GRXCR2A6NFK2 248 aa25.12■■□□□ 1.61
TRAPPC4-210ENST00000531290 CSPG5O95196 566 aa25.12■■□□□ 1.61
TRAPPC4-210ENST00000531290 MMP1P03956 469 aa25.12■■□□□ 1.61
TRAPPC4-210ENST00000531290 GATMP50440 423 aa25.12■■□□□ 1.61
TRAPPC4-210ENST00000531290 NLRP11P59045 1033 aaKnown RBP25.12■■□□□ 1.61
TRAPPC4-210ENST00000531290 COL19A1Q14993 1142 aa25.12■■□□□ 1.61
TRAPPC4-210ENST00000531290 NONOQ15233 471 aaKnown RBP eCLIP25.12■■□□□ 1.61
TRAPPC4-210ENST00000531290 SPOUT1Q5T280 376 aaKnown RBP25.12■■□□□ 1.61
TRAPPC4-210ENST00000531290 MIER3Q7Z3K6 550 aa25.12■■□□□ 1.61
TRAPPC4-210ENST00000531290 FAM228AQ86W67 206 aa25.12■■□□□ 1.61
TRAPPC4-210ENST00000531290 LRRC71Q8N4P6 559 aa25.12■■□□□ 1.61
TRAPPC4-210ENST00000531290 RDM1Q8NG50 284 aa25.12■■□□□ 1.61
TRAPPC4-210ENST00000531290 GJA10Q969M2 543 aa25.12■■□□□ 1.61
TRAPPC4-210ENST00000531290 AIFM3Q96NN9 605 aa25.12■■□□□ 1.61
TRAPPC4-210ENST00000531290 SLKQ9H2G2 1235 aaPredicted RBP25.12■■□□□ 1.61
TRAPPC4-210ENST00000531290 BDP1A6H8Y1 2624 aa25.11■■□□□ 1.61
TRAPPC4-210ENST00000531290 PSMD10O75832 226 aa25.11■■□□□ 1.61
TRAPPC4-210ENST00000531290 TDP2O95551 362 aa25.11■■□□□ 1.61
TRAPPC4-210ENST00000531290 IL9P15248 144 aa25.11■■□□□ 1.61
TRAPPC4-210ENST00000531290 KRT25Q7Z3Z0 450 aa25.11■■□□□ 1.61
TRAPPC4-210ENST00000531290 FAM178BQ8IXR5 827 aa25.11■■□□□ 1.61
TRAPPC4-210ENST00000531290 KLHL23Q8NBE8 558 aa25.11■■□□□ 1.61
TRAPPC4-210ENST00000531290 PPP2R3CQ969Q6 453 aa25.11■■□□□ 1.61
TRAPPC4-210ENST00000531290 ATP6V0A4Q9HBG4 840 aa25.11■■□□□ 1.61
TRAPPC4-210ENST00000531290 TBKBP1A7MCY6 615 aa25.1■■□□□ 1.61
TRAPPC4-210ENST00000531290 C9IYK1 514 aa25.1■■□□□ 1.61
TRAPPC4-210ENST00000531290 M0R2N6 131 aa25.1■■□□□ 1.61
TRAPPC4-210ENST00000531290 XBP1P17861 261 aa25.1■■□□□ 1.61
TRAPPC4-210ENST00000531290 TBC1D8BQ0IIM8 1120 aa25.1■■□□□ 1.61
TRAPPC4-210ENST00000531290 HYAL1Q12794 435 aa25.1■■□□□ 1.61
TRAPPC4-210ENST00000531290 UGCGQ16739 394 aa25.1■■□□□ 1.61
TRAPPC4-210ENST00000531290 MOXD1Q6UVY6 613 aa25.1■■□□□ 1.61
TRAPPC4-210ENST00000531290 GJD3Q8N144 294 aa25.1■■□□□ 1.61
TRAPPC4-210ENST00000531290 SPPL3Q8TCT6 385 aa25.1■■□□□ 1.61
TRAPPC4-210ENST00000531290 SCLT1Q96NL6 688 aa25.1■■□□□ 1.61
TRAPPC4-210ENST00000531290 IGFLR1Q9H665 355 aa25.1■■□□□ 1.61
TRAPPC4-210ENST00000531290 EPHX3Q9H6B9 360 aa25.1■■□□□ 1.61
TRAPPC4-210ENST00000531290 AAASQ9NRG9 546 aa25.1■■□□□ 1.61
TRAPPC4-210ENST00000531290 DDX25Q9UHL0 483 aaKnown RBP25.1■■□□□ 1.61
TRAPPC4-210ENST00000531290 KCNJ14Q9UNX9 436 aa25.1■■□□□ 1.61
TRAPPC4-210ENST00000531290 PCDHB12Q9Y5F1 795 aa25.1■■□□□ 1.61
TRAPPC4-210ENST00000531290 ITGB1P05556 798 aa25.09■■□□□ 1.61
TRAPPC4-210ENST00000531290 ZSCAN20P17040 1043 aaPredicted RBP25.09■■□□□ 1.61
TRAPPC4-210ENST00000531290 EIF4BP23588 611 aaKnown RBP25.09■■□□□ 1.61
TRAPPC4-210ENST00000531290 SSTR3P32745 418 aaPredicted RBP25.09■■□□□ 1.61
TRAPPC4-210ENST00000531290 FAM189BP81408 668 aa25.09■■□□□ 1.61
TRAPPC4-210ENST00000531290 SCRN1Q12765 414 aa25.09■■□□□ 1.61
TRAPPC4-210ENST00000531290 FAM102BQ5T8I3 360 aa25.09■■□□□ 1.61
TRAPPC4-210ENST00000531290 LINC01465Q8N7H1 131 aa25.09■■□□□ 1.61
TRAPPC4-210ENST00000531290 ADAMTS10Q9H324 1103 aa25.09■■□□□ 1.61
TRAPPC4-210ENST00000531290 TMEM161AQ9NX61 479 aa25.09■■□□□ 1.61
TRAPPC4-210ENST00000531290 TCF20Q9UGU0 1960 aaKnown RBP25.09■■□□□ 1.61
TRAPPC4-210ENST00000531290 CCDC194A0A1B0GVG4 234 aa25.08■■□□□ 1.61
TRAPPC4-210ENST00000531290 CAMK1Q14012 370 aa25.08■■□□□ 1.61
TRAPPC4-210ENST00000531290 NPY5RQ15761 445 aa25.08■■□□□ 1.61
TRAPPC4-210ENST00000531290 INF2Q27J81 1249 aa25.08■■□□□ 1.61
TRAPPC4-210ENST00000531290 CTC1Q2NKJ3 1217 aa25.08■■□□□ 1.61
TRAPPC4-210ENST00000531290 LETM2Q2VYF4 491 aa25.08■■□□□ 1.61
TRAPPC4-210ENST00000531290 XKR3Q5GH77 459 aa25.08■■□□□ 1.61
TRAPPC4-210ENST00000531290 POF1BQ8WVV4 589 aa25.08■■□□□ 1.61
TRAPPC4-210ENST00000531290 MBOAT7Q96N66 472 aa25.08■■□□□ 1.61
TRAPPC4-210ENST00000531290 ELAC1Q9H777 363 aaKnown RBP25.08■■□□□ 1.61
TRAPPC4-210ENST00000531290 CD320Q9NPF0 282 aa25.08■■□□□ 1.61
TRAPPC4-210ENST00000531290 SEPT9Q9UHD8 586 aaPredicted RBP25.08■■□□□ 1.61
TRAPPC4-210ENST00000531290 TTC3P53804 2025 aa25.07■■□□□ 1.6
TRAPPC4-210ENST00000531290 DSC3Q14574 896 aa25.07■■□□□ 1.6
TRAPPC4-210ENST00000531290 ANKRD1Q15327 319 aa25.07■■□□□ 1.6
TRAPPC4-210ENST00000531290 ETNPPLQ8TBG4 499 aa25.07■■□□□ 1.6
TRAPPC4-210ENST00000531290 ZNF668Q96K58 619 aaPredicted RBP25.07■■□□□ 1.6
TRAPPC4-210ENST00000531290 NIFKQ9BYG3 293 aaKnown RBP25.07■■□□□ 1.6
TRAPPC4-210ENST00000531290 TPCN1Q9ULQ1 816 aa25.07■■□□□ 1.6
TRAPPC4-210ENST00000531290 NCOR1O75376 2440 aa25.07■■□□□ 1.6
TRAPPC4-210ENST00000531290 PFKFB2O60825 505 aa25.06■■□□□ 1.6
TRAPPC4-210ENST00000531290 DNAJB1P25685 340 aa25.06■■□□□ 1.6
TRAPPC4-210ENST00000531290 LTBRP36941 435 aa25.06■■□□□ 1.6
TRAPPC4-210ENST00000531290 DNM2P50570 870 aa25.06■■□□□ 1.6
TRAPPC4-210ENST00000531290 GPC3P51654 580 aa25.06■■□□□ 1.6
TRAPPC4-210ENST00000531290 ANAPC15P60006 121 aa25.06■■□□□ 1.6
TRAPPC4-210ENST00000531290 CDC42EP1Q00587 391 aa25.06■■□□□ 1.6
TRAPPC4-210ENST00000531290 TARBP2Q15633 366 aaKnown RBP25.06■■□□□ 1.6
TRAPPC4-210ENST00000531290 MTERF2Q49AM1 385 aa25.06■■□□□ 1.6
TRAPPC4-210ENST00000531290 NLRP7Q8WX94 980 aa25.06■■□□□ 1.6
TRAPPC4-210ENST00000531290 PHF20Q9BVI0 1012 aa25.06■■□□□ 1.6
TRAPPC4-210ENST00000531290 DDX11L8A8MPP1 907 aa25.05■■□□□ 1.6
TRAPPC4-210ENST00000531290 HOXA2O43364 376 aa25.05■■□□□ 1.6
TRAPPC4-210ENST00000531290 FGFR1P11362 822 aa25.05■■□□□ 1.6
TRAPPC4-210ENST00000531290 B3GNT9Q6UX72 402 aa25.05■■□□□ 1.6
TRAPPC4-210ENST00000531290 MICAL1Q8TDZ2 1067 aa25.05■■□□□ 1.6
TRAPPC4-210ENST00000531290 TYW1Q9NV66 732 aaKnown RBP25.05■■□□□ 1.6
TRAPPC4-210ENST00000531290 STK36Q9NRP7 1315 aa25.05■■□□□ 1.6
TRAPPC4-210ENST00000531290 MARCH6O60337 910 aa25.04■■□□□ 1.6
TRAPPC4-210ENST00000531290 DARSP14868 501 aaKnown RBP25.04■■□□□ 1.6
TRAPPC4-210ENST00000531290 GTF2F1P35269 517 aaKnown RBP eCLIP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms