RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 GOLGA6L22H0YM25 854 aa18.84■□□□□ 0.61
SF3B2-211ENST00000531041 GAS2O43903 313 aaKnown RBP18.84■□□□□ 0.61
SF3B2-211ENST00000531041 SYKP43405 635 aa18.84■□□□□ 0.61
SF3B2-211ENST00000531041 POLGP54098 1239 aaPredicted RBP18.84■□□□□ 0.61
SF3B2-211ENST00000531041 PTK7Q13308 1070 aa18.84■□□□□ 0.61
SF3B2-211ENST00000531041 TAF2Q6P1X5 1199 aa18.84■□□□□ 0.61
SF3B2-211ENST00000531041 PADI6Q6TGC4 694 aa18.84■□□□□ 0.61
SF3B2-211ENST00000531041 RETREG2Q8NC44 543 aa18.84■□□□□ 0.61
SF3B2-211ENST00000531041 SLC7A3Q8WY07 619 aa18.84■□□□□ 0.61
SF3B2-211ENST00000531041 DHX58Q96C10 678 aa18.84■□□□□ 0.61
SF3B2-211ENST00000531041 USP25Q9UHP3 1055 aa18.84■□□□□ 0.61
SF3B2-211ENST00000531041 NOD1Q9Y239 953 aa18.84■□□□□ 0.61
SF3B2-211ENST00000531041 ATP11BQ9Y2G3 1177 aa18.84■□□□□ 0.61
SF3B2-211ENST00000531041 TANC1Q9C0D5 1861 aa18.84■□□□□ 0.61
SF3B2-211ENST00000531041 SMIM35A0A1B0GVV1 85 aa18.83■□□□□ 0.61
SF3B2-211ENST00000531041 CYP2C9P11712 490 aa18.83■□□□□ 0.61
SF3B2-211ENST00000531041 FAAP100Q0VG06 881 aa18.83■□□□□ 0.61
SF3B2-211ENST00000531041 MCM6Q14566 821 aa18.83■□□□□ 0.61
SF3B2-211ENST00000531041 EFCAB12Q6NXP0 572 aa18.83■□□□□ 0.61
SF3B2-211ENST00000531041 LINC01465Q8N7H1 131 aa18.83■□□□□ 0.61
SF3B2-211ENST00000531041 ZBTB10Q96DT7 871 aa18.83■□□□□ 0.61
SF3B2-211ENST00000531041 HTATIP2Q9BUP3 242 aa18.83■□□□□ 0.61
SF3B2-211ENST00000531041 LMBRD1Q9NUN5 540 aa18.83■□□□□ 0.61
SF3B2-211ENST00000531041 KCND2Q9NZV8 630 aa18.83■□□□□ 0.61
SF3B2-211ENST00000531041 RPLP2P05387 115 aaKnown RBP18.83■□□□□ 0.6
SF3B2-211ENST00000531041 SSBP05455 408 aaKnown RBP eCLIP18.83■□□□□ 0.6
SF3B2-211ENST00000531041 CYP11B2P19099 503 aa18.83■□□□□ 0.6
SF3B2-211ENST00000531041 TMOD1P28289 359 aa18.83■□□□□ 0.6
SF3B2-211ENST00000531041 FAM160A1Q05DH4 1040 aa18.83■□□□□ 0.6
SF3B2-211ENST00000531041 EMC2Q15006 297 aa18.83■□□□□ 0.6
SF3B2-211ENST00000531041 RINT1Q6NUQ1 792 aa18.83■□□□□ 0.6
SF3B2-211ENST00000531041 C1orf186Q6ZWK4 172 aa18.83■□□□□ 0.6
SF3B2-211ENST00000531041 SV2BQ7L1I2 683 aa18.83■□□□□ 0.6
SF3B2-211ENST00000531041 RPAINQ86UA6 219 aa18.83■□□□□ 0.6
SF3B2-211ENST00000531041 FMR1NBQ8N0W7 255 aaPredicted RBP18.83■□□□□ 0.6
SF3B2-211ENST00000531041 ENGASEQ8NFI3 743 aa18.83■□□□□ 0.6
SF3B2-211ENST00000531041 MTRQ99707 1265 aa18.83■□□□□ 0.6
SF3B2-211ENST00000531041 MAGEF1Q9HAY2 307 aa18.83■□□□□ 0.6
SF3B2-211ENST00000531041 ATP6V0A4Q9HBG4 840 aa18.83■□□□□ 0.6
SF3B2-211ENST00000531041 KBTBD4Q9NVX7 518 aa18.83■□□□□ 0.6
SF3B2-211ENST00000531041 ACTN4O43707 911 aaKnown RBP18.82■□□□□ 0.6
SF3B2-211ENST00000531041 USO1O60763 962 aaKnown RBP18.82■□□□□ 0.6
SF3B2-211ENST00000531041 ZNF202O95125 648 aa18.82■□□□□ 0.6
SF3B2-211ENST00000531041 SLFN14P0C7P3 912 aa18.82■□□□□ 0.6
SF3B2-211ENST00000531041 SNW1Q13573 536 aaKnown RBP18.82■□□□□ 0.6
SF3B2-211ENST00000531041 RUFY4Q6ZNE9 571 aa18.82■□□□□ 0.6
SF3B2-211ENST00000531041 KIAA0319LQ8IZA0 1049 aa18.82■□□□□ 0.6
SF3B2-211ENST00000531041 METTL13Q8N6R0 699 aa18.82■□□□□ 0.6
SF3B2-211ENST00000531041 MCPH1Q8NEM0 835 aa18.82■□□□□ 0.6
SF3B2-211ENST00000531041 TCP11Q8WWU5 503 aa18.82■□□□□ 0.6
SF3B2-211ENST00000531041 RUSC1Q9BVN2 902 aa18.82■□□□□ 0.6
SF3B2-211ENST00000531041 TNMDQ9H2S6 317 aa18.82■□□□□ 0.6
SF3B2-211ENST00000531041 SUGCTQ9HAC7 445 aa18.82■□□□□ 0.6
SF3B2-211ENST00000531041 XPNPEP1Q9NQW7 623 aa18.82■□□□□ 0.6
SF3B2-211ENST00000531041 CLTBP09497 229 aa18.81■□□□□ 0.6
SF3B2-211ENST00000531041 DNM2P50570 870 aa18.81■□□□□ 0.6
SF3B2-211ENST00000531041 CLCN3P51790 818 aa18.81■□□□□ 0.6
SF3B2-211ENST00000531041 MKRN4PQ13434 485 aaPredicted RBP18.81■□□□□ 0.6
SF3B2-211ENST00000531041 DHX8Q14562 1220 aaKnown RBP18.81■□□□□ 0.6
SF3B2-211ENST00000531041 TRIM71Q2Q1W2 868 aaKnown RBP18.81■□□□□ 0.6
SF3B2-211ENST00000531041 LONRF3Q496Y0 759 aa18.81■□□□□ 0.6
SF3B2-211ENST00000531041 ARSHQ5FYA8 562 aa18.81■□□□□ 0.6
SF3B2-211ENST00000531041 IER5Q5VY09 327 aa18.81■□□□□ 0.6
SF3B2-211ENST00000531041 GPBP1Q86WP2 473 aa18.81■□□□□ 0.6
SF3B2-211ENST00000531041 CEP57L1Q8IYX8 460 aa18.81■□□□□ 0.6
SF3B2-211ENST00000531041 NME8Q8N427 588 aa18.81■□□□□ 0.6
SF3B2-211ENST00000531041 LRRC71Q8N4P6 559 aa18.81■□□□□ 0.6
SF3B2-211ENST00000531041 DNAJB3Q8WWF6 145 aa18.81■□□□□ 0.6
SF3B2-211ENST00000531041 DHX38Q92620 1227 aaKnown RBP18.81■□□□□ 0.6
SF3B2-211ENST00000531041 WNT8BQ93098 351 aa18.81■□□□□ 0.6
SF3B2-211ENST00000531041 TIPINQ9BVW5 301 aa18.81■□□□□ 0.6
SF3B2-211ENST00000531041 SERTAD1Q9UHV2 236 aa18.81■□□□□ 0.6
SF3B2-211ENST00000531041 SCN5AQ14524 2016 aa18.8■□□□□ 0.6
SF3B2-211ENST00000531041 LIG1P18858 919 aa18.8■□□□□ 0.6
SF3B2-211ENST00000531041 GUCY2CP25092 1073 aa18.8■□□□□ 0.6
SF3B2-211ENST00000531041 RBL2Q08999 1139 aa18.8■□□□□ 0.6
SF3B2-211ENST00000531041 DRP2Q13474 957 aa18.8■□□□□ 0.6
SF3B2-211ENST00000531041 RSPH3Q86UC2 560 aa18.8■□□□□ 0.6
SF3B2-211ENST00000531041 CAGE1Q8TC20 777 aa18.8■□□□□ 0.6
SF3B2-211ENST00000531041 LRRC27Q9C0I9 530 aa18.8■□□□□ 0.6
SF3B2-211ENST00000531041 BMP2KQ9NSY1 1161 aaPredicted RBP18.8■□□□□ 0.6
SF3B2-211ENST00000531041 TBX21Q9UL17 535 aa18.8■□□□□ 0.6
SF3B2-211ENST00000531041 LTBP2Q14767 1821 aa18.79■□□□□ 0.6
SF3B2-211ENST00000531041 CAND2O75155 1236 aa18.79■□□□□ 0.6
SF3B2-211ENST00000531041 NR1I2O75469 434 aa18.79■□□□□ 0.6
SF3B2-211ENST00000531041 AMPD3Q01432 767 aa18.79■□□□□ 0.6
SF3B2-211ENST00000531041 KRBA2Q6ZNG9 492 aa18.79■□□□□ 0.6
SF3B2-211ENST00000531041 ZNF710Q8N1W2 664 aa18.79■□□□□ 0.6
SF3B2-211ENST00000531041 CCDC155Q8N6L0 562 aa18.79■□□□□ 0.6
SF3B2-211ENST00000531041 TMEM143Q96AN5 459 aa18.79■□□□□ 0.6
SF3B2-211ENST00000531041 MAP7D2Q96T17 732 aa18.79■□□□□ 0.6
SF3B2-211ENST00000531041 FAM49AQ9H0Q0 323 aaPredicted RBP18.79■□□□□ 0.6
SF3B2-211ENST00000531041 MYMKA6NI61 221 aa18.78■□□□□ 0.6
SF3B2-211ENST00000531041 PITPNM1O00562 1244 aa18.78■□□□□ 0.6
SF3B2-211ENST00000531041 MCM4P33991 863 aa18.78■□□□□ 0.6
SF3B2-211ENST00000531041 ARL2P36404 184 aa18.78■□□□□ 0.6
SF3B2-211ENST00000531041 RGS19P49795 217 aa18.78■□□□□ 0.6
SF3B2-211ENST00000531041 BFSP2Q13515 415 aa18.78■□□□□ 0.6
SF3B2-211ENST00000531041 MAEAQ7L5Y9 396 aa18.78■□□□□ 0.6
SF3B2-211ENST00000531041 CNNM3Q8NE01 707 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms